RNA–Protein interactions for RNA: ENST00000559907.5

B2M-207, Transcript of beta-2-microglobulin, humanhuman

TSL 3

Gene B2M, Length 499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
B2M-207ENST00000559907 NISCHQ9Y2I1 1504 aa34.89■■■■□ 3.18
B2M-207ENST00000559907 AEBP2Q6ZN18 517 aaPredicted RBP32.71■■■□□ 2.83
B2M-207ENST00000559907 CCDC180Q9P1Z9 1646 aa30.98■■■□□ 2.55
B2M-207ENST00000559907 CHIC1Q5VXU3 224 aa30.53■■■□□ 2.48
B2M-207ENST00000559907 ABCC9O60706 1549 aa30.35■■■□□ 2.45
B2M-207ENST00000559907 RB1CC1Q8TDY2 1594 aa29.16■■■□□ 2.26
B2M-207ENST00000559907 NACADO15069 1562 aa29.15■■■□□ 2.26
B2M-207ENST00000559907 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
B2M-207ENST00000559907 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
B2M-207ENST00000559907 MYO15BQ96JP2 1530 aa29.01■■■□□ 2.23
B2M-207ENST00000559907 DCAF1Q9Y4B6 1507 aa28.88■■■□□ 2.21
B2M-207ENST00000559907 UNC13AQ9UPW8 1703 aa28.59■■■□□ 2.17
B2M-207ENST00000559907 BICRAQ9NZM4 1560 aa28.39■■■□□ 2.14
B2M-207ENST00000559907 PABPN1Q86U42 306 aaKnown RBP eCLIP28.38■■■□□ 2.13
B2M-207ENST00000559907 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
B2M-207ENST00000559907 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
B2M-207ENST00000559907 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
B2M-207ENST00000559907 SENP3Q9H4L4 574 aaPredicted RBP27.85■■■□□ 2.05
B2M-207ENST00000559907 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
B2M-207ENST00000559907 PHF23Q9BUL5 403 aaPredicted RBP27.47■■□□□ 1.99
B2M-207ENST00000559907 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
B2M-207ENST00000559907 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
B2M-207ENST00000559907 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
B2M-207ENST00000559907 BAZ1AQ9NRL2 1556 aaPredicted RBP27■■□□□ 1.91
B2M-207ENST00000559907 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
B2M-207ENST00000559907 ATAD2BQ9ULI0 1458 aa26.94■■□□□ 1.9
B2M-207ENST00000559907 MROH2BQ7Z745 1585 aa26.91■■□□□ 1.9
B2M-207ENST00000559907 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
B2M-207ENST00000559907 PEG3Q9GZU2 1588 aa26.83■■□□□ 1.89
B2M-207ENST00000559907 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
B2M-207ENST00000559907 BAZ1BQ9UIG0 1483 aaKnown RBP26.65■■□□□ 1.86
B2M-207ENST00000559907 WIZO95785 1651 aa26.6■■□□□ 1.85
B2M-207ENST00000559907 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
B2M-207ENST00000559907 NESP48681 1621 aa26.3■■□□□ 1.8
B2M-207ENST00000559907 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
B2M-207ENST00000559907 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
B2M-207ENST00000559907 CADPSQ9ULU8 1353 aa26.13■■□□□ 1.77
B2M-207ENST00000559907 FOXD1Q16676 465 aa26.09■■□□□ 1.77
B2M-207ENST00000559907 ERCC6Q03468 1493 aa26.08■■□□□ 1.77
B2M-207ENST00000559907 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
B2M-207ENST00000559907 CFTRP13569 1480 aa25.98■■□□□ 1.75
B2M-207ENST00000559907 PDS5BQ9NTI5 1447 aa25.98■■□□□ 1.75
B2M-207ENST00000559907 KIF21AQ7Z4S6 1674 aa25.96■■□□□ 1.75
B2M-207ENST00000559907 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
B2M-207ENST00000559907 CUX2O14529 1486 aa25.87■■□□□ 1.73
B2M-207ENST00000559907 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
B2M-207ENST00000559907 FANCD2Q9BXW9 1451 aa25.8■■□□□ 1.72
B2M-207ENST00000559907 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
B2M-207ENST00000559907 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
B2M-207ENST00000559907 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
B2M-207ENST00000559907 WDR62O43379 1518 aa25.67■■□□□ 1.7
B2M-207ENST00000559907 URB2Q14146 1524 aaKnown RBP25.59■■□□□ 1.69
B2M-207ENST00000559907 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
B2M-207ENST00000559907 ABCC8Q09428 1581 aa25.37■■□□□ 1.65
B2M-207ENST00000559907 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
B2M-207ENST00000559907 CUX1P39880 1505 aa25.22■■□□□ 1.63
B2M-207ENST00000559907 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
B2M-207ENST00000559907 DNAJC5Q9H3Z4 198 aa25.19■■□□□ 1.62
B2M-207ENST00000559907 POLA1P09884 1462 aaPredicted RBP25.19■■□□□ 1.62
B2M-207ENST00000559907 TARBP1Q13395 1621 aaKnown RBP25.17■■□□□ 1.62
B2M-207ENST00000559907 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
B2M-207ENST00000559907 FGD5Q6ZNL6 1462 aa25.11■■□□□ 1.61
B2M-207ENST00000559907 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
B2M-207ENST00000559907 SOGA1O94964 1423 aa25.08■■□□□ 1.61
B2M-207ENST00000559907 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.59
B2M-207ENST00000559907 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.591e-9■■■■□ 20.3
B2M-207ENST00000559907 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
B2M-207ENST00000559907 BIVM-ERCC5R4GMW8 1640 aa24.99■■□□□ 1.59
B2M-207ENST00000559907 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
B2M-207ENST00000559907 SYNJ1O43426 1573 aa24.98■■□□□ 1.59
B2M-207ENST00000559907 TDRD9Q8NDG6 1382 aaKnown RBP24.95■■□□□ 1.59
B2M-207ENST00000559907 WDR97A6NE52 1622 aa24.93■■□□□ 1.58
B2M-207ENST00000559907 ABCA10Q8WWZ4 1543 aa24.88■■□□□ 1.57
B2M-207ENST00000559907 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
B2M-207ENST00000559907 POTEDQ86YR6 584 aa24.81■■□□□ 1.56
B2M-207ENST00000559907 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
B2M-207ENST00000559907 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
B2M-207ENST00000559907 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
B2M-207ENST00000559907 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
B2M-207ENST00000559907 CHD1O14646 1710 aa24.72■■□□□ 1.55
B2M-207ENST00000559907 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
B2M-207ENST00000559907 MAGI1Q96QZ7 1491 aaPredicted RBP24.7■■□□□ 1.55
B2M-207ENST00000559907 FBLN2P98095 1184 aa24.63■■□□□ 1.53
B2M-207ENST00000559907 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
B2M-207ENST00000559907 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.53
B2M-207ENST00000559907 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
B2M-207ENST00000559907 ADAMTS12P58397 1594 aa24.52■■□□□ 1.52
B2M-207ENST00000559907 MSH5O43196 834 aa24.51■■□□□ 1.51
B2M-207ENST00000559907 FHAD1B1AJZ9 1412 aa24.49■■□□□ 1.51
B2M-207ENST00000559907 CLASP1Q7Z460 1538 aa24.48■■□□□ 1.51
B2M-207ENST00000559907 KIF27Q86VH2 1401 aa24.47■■□□□ 1.51
B2M-207ENST00000559907 IGF1RP08069 1367 aa24.47■■□□□ 1.51
B2M-207ENST00000559907 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
B2M-207ENST00000559907 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
B2M-207ENST00000559907 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
B2M-207ENST00000559907 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
B2M-207ENST00000559907 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
B2M-207ENST00000559907 NUP160Q12769 1436 aa24.39■■□□□ 1.5
B2M-207ENST00000559907 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
B2M-207ENST00000559907 CEP170Q5SW79 1584 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms