RNA–Protein interactions for RNA: ENST00000460427.2

ACTR1B-203, Transcript of ARP1 actin related protein 1 homolog B, humanhuman

TSL 2

Gene ACTR1B, Length 730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1B-203ENST00000460427 NISCHQ9Y2I1 1504 aa50.59■■■■■ 5.69
ACTR1B-203ENST00000460427 CCDC180Q9P1Z9 1646 aa45.34■■■■■ 4.85
ACTR1B-203ENST00000460427 ABCC9O60706 1549 aa44.82■■■■■ 4.77
ACTR1B-203ENST00000460427 RB1CC1Q8TDY2 1594 aa42.9■■■■■ 4.46
ACTR1B-203ENST00000460427 NACADO15069 1562 aa42.69■■■■■ 4.43
ACTR1B-203ENST00000460427 DCAF8L2P0C7V8 631 aa42.48■■■■■ 4.39
ACTR1B-203ENST00000460427 MYO15BQ96JP2 1530 aa42.2■■■■■ 4.35
ACTR1B-203ENST00000460427 UNC13AQ9UPW8 1703 aa42.09■■■■■ 4.33
ACTR1B-203ENST00000460427 ZCCHC6Q5VYS8 1495 aaKnown RBP42■■■■■ 4.31
ACTR1B-203ENST00000460427 DCAF1Q9Y4B6 1507 aa41.82■■■■■ 4.29
ACTR1B-203ENST00000460427 PABPN1Q86U42 306 aaKnown RBP eCLIP41.74■■■■■ 4.27
ACTR1B-203ENST00000460427 BICRAQ9NZM4 1560 aa41.62■■■■■ 4.25
ACTR1B-203ENST00000460427 DNAJC5BQ9UF47 199 aa41.61■■■■■ 4.25
ACTR1B-203ENST00000460427 SCRIBQ14160 1630 aa41.28■■■■■ 4.2
ACTR1B-203ENST00000460427 SHROOM4Q9ULL8 1493 aa41.09■■■■■ 4.17
ACTR1B-203ENST00000460427 CC2D2AQ9P2K1 1620 aa40.57■■■■■ 4.09
ACTR1B-203ENST00000460427 EIF4G1Q04637 1599 aaKnown RBP40.57■■■■■ 4.08
ACTR1B-203ENST00000460427 CECR2Q9BXF3 1484 aa40.32■■■■■ 4.05
ACTR1B-203ENST00000460427 SMARCA4P51532 1647 aa39.43■■■■□ 3.9
ACTR1B-203ENST00000460427 NCAPD3P42695 1498 aa39.35■■■■□ 3.89
ACTR1B-203ENST00000460427 ATAD2BQ9ULI0 1458 aa39.29■■■■□ 3.88
ACTR1B-203ENST00000460427 BAZ1AQ9NRL2 1556 aaPredicted RBP39.26■■■■□ 3.88
ACTR1B-203ENST00000460427 SMARCA2P51531 1590 aa39.25■■■■□ 3.87
ACTR1B-203ENST00000460427 HMGXB3Q12766 1538 aa39.14■■■■□ 3.86
ACTR1B-203ENST00000460427 PEG3Q9GZU2 1588 aa39.02■■■■□ 3.84
ACTR1B-203ENST00000460427 MROH2BQ7Z745 1585 aa38.98■■■■□ 3.83
ACTR1B-203ENST00000460427 BAZ1BQ9UIG0 1483 aaKnown RBP38.96■■■■□ 3.83
ACTR1B-203ENST00000460427 ERCC6Q03468 1493 aa38.68■■■■□ 3.78
ACTR1B-203ENST00000460427 NESP48681 1621 aa38.62■■■■□ 3.77
ACTR1B-203ENST00000460427 WIZO95785 1651 aa38.6■■■■□ 3.77
ACTR1B-203ENST00000460427 LAMC3Q9Y6N6 1575 aa38.48■■■■□ 3.75
ACTR1B-203ENST00000460427 CUX2O14529 1486 aa38.47■■■■□ 3.75
ACTR1B-203ENST00000460427 RSF1Q96T23 1441 aaPredicted RBP38.29■■■■□ 3.72
ACTR1B-203ENST00000460427 KIF21AQ7Z4S6 1674 aa38.27■■■■□ 3.72
ACTR1B-203ENST00000460427 THOC2Q8NI27 1593 aaKnown RBP38.21■■■■□ 3.71
ACTR1B-203ENST00000460427 PDS5BQ9NTI5 1447 aa38.18■■■■□ 3.7
ACTR1B-203ENST00000460427 CADPSQ9ULU8 1353 aa38.16■■■■□ 3.7
ACTR1B-203ENST00000460427 TOP2AP11388 1531 aaKnown RBP38.1■■■■□ 3.69
ACTR1B-203ENST00000460427 DNAJC5Q9H3Z4 198 aa37.95■■■■□ 3.67
ACTR1B-203ENST00000460427 MRC2Q9UBG0 1479 aa37.84■■■■□ 3.65
ACTR1B-203ENST00000460427 CFTRP13569 1480 aa37.83■■■■□ 3.65
ACTR1B-203ENST00000460427 CEP164Q9UPV0 1460 aa37.78■■■■□ 3.64
ACTR1B-203ENST00000460427 FANCD2Q9BXW9 1451 aa37.76■■■■□ 3.63
ACTR1B-203ENST00000460427 WDR62O43379 1518 aa37.75■■■■□ 3.63
ACTR1B-203ENST00000460427 PRDM2Q13029 1718 aa37.73■■■■□ 3.63
ACTR1B-203ENST00000460427 CCDC88BA6NC98 1476 aa37.62■■■■□ 3.61
ACTR1B-203ENST00000460427 URB2Q14146 1524 aaKnown RBP37.41■■■■□ 3.58
ACTR1B-203ENST00000460427 TOPBP1Q92547 1522 aa37.1■■■■□ 3.53
ACTR1B-203ENST00000460427 ABCC8Q09428 1581 aa37.07■■■■□ 3.52
ACTR1B-203ENST00000460427 DNMBPQ6XZF7 1577 aa37.03■■■■□ 3.52
ACTR1B-203ENST00000460427 IFT140Q96RY7 1462 aa36.99■■■■□ 3.51
ACTR1B-203ENST00000460427 SUPT5HO00267 1087 aaKnown RBP36.88■■■■□ 3.49
ACTR1B-203ENST00000460427 ZNF608Q9ULD9 1512 aaPredicted RBP36.88■■■■□ 3.49
ACTR1B-203ENST00000460427 TARBP1Q13395 1621 aaKnown RBP36.78■■■■□ 3.48
ACTR1B-203ENST00000460427 EIF4G3O43432 1585 aaKnown RBP36.78■■■■□ 3.48
ACTR1B-203ENST00000460427 OSCARQ8IYS5 282 aa36.75■■■■□ 3.47
ACTR1B-203ENST00000460427 POLA1P09884 1462 aaPredicted RBP36.73■■■■□ 3.47
ACTR1B-203ENST00000460427 CUX1P39880 1505 aa36.6■■■■□ 3.45
ACTR1B-203ENST00000460427 AQRO60306 1485 aaKnown RBP eCLIP36.59■■■■□ 3.451e-9■■■□□ 15.6
ACTR1B-203ENST00000460427 FGD5Q6ZNL6 1462 aa36.57■■■■□ 3.45
ACTR1B-203ENST00000460427 RAD54L2Q9Y4B4 1467 aa36.57■■■■□ 3.45
ACTR1B-203ENST00000460427 SOGA1O94964 1423 aa36.56■■■■□ 3.44
ACTR1B-203ENST00000460427 CHD1O14646 1710 aa36.51■■■■□ 3.44
ACTR1B-203ENST00000460427 TRIM41Q8WV44 630 aa36.47■■■■□ 3.43
ACTR1B-203ENST00000460427 WDR97A6NE52 1622 aa36.46■■■■□ 3.43
ACTR1B-203ENST00000460427 TDRD9Q8NDG6 1382 aaKnown RBP36.41■■■■□ 3.42
ACTR1B-203ENST00000460427 RIMBP3CA6NJZ7 1639 aa36.33■■■■□ 3.41
ACTR1B-203ENST00000460427 RIMBP3BA6NNM3 1639 aa36.33■■■■□ 3.41
ACTR1B-203ENST00000460427 RIMBP3Q9UFD9 1639 aa36.33■■■■□ 3.41
ACTR1B-203ENST00000460427 FBLN2P98095 1184 aa36.26■■■■□ 3.4
ACTR1B-203ENST00000460427 SNAPC4Q5SXM2 1469 aa36.25■■■■□ 3.39
ACTR1B-203ENST00000460427 PBRM1Q86U86 1689 aa36.25■■■■□ 3.39
ACTR1B-203ENST00000460427 GRIN2BQ13224 1484 aa36.21■■■■□ 3.39
ACTR1B-203ENST00000460427 BIVM-ERCC5R4GMW8 1640 aa36.21■■■■□ 3.39
ACTR1B-203ENST00000460427 ARHGEF11O15085 1522 aa36.2■■■■□ 3.39
ACTR1B-203ENST00000460427 MAGI1Q96QZ7 1491 aaPredicted RBP36.18■■■■□ 3.38
ACTR1B-203ENST00000460427 ABCA10Q8WWZ4 1543 aa36.18■■■■□ 3.38
ACTR1B-203ENST00000460427 TOP2BQ02880 1626 aa36.17■■■■□ 3.38
ACTR1B-203ENST00000460427 GAPVD1Q14C86 1478 aa36.15■■■■□ 3.38
ACTR1B-203ENST00000460427 ABCA5Q8WWZ7 1642 aa36.14■■■■□ 3.38
ACTR1B-203ENST00000460427 SYNJ1O43426 1573 aa36.12■■■■□ 3.37
ACTR1B-203ENST00000460427 WRNQ14191 1432 aaPredicted RBP eCLIP36.12■■■■□ 3.37
ACTR1B-203ENST00000460427 CHMP7Q8WUX9 453 aaPredicted RBP36.07■■■■□ 3.36
ACTR1B-203ENST00000460427 SYNJ2O15056 1496 aa36.05■■■■□ 3.36
ACTR1B-203ENST00000460427 CLASP1Q7Z460 1538 aa35.98■■■■□ 3.35
ACTR1B-203ENST00000460427 CYB5RLQ6IPT4 315 aa35.87■■■■□ 3.33
ACTR1B-203ENST00000460427 ARAP1Q96P48 1450 aa35.86■■■■□ 3.33
ACTR1B-203ENST00000460427 ADAMTS12P58397 1594 aa35.83■■■■□ 3.33
ACTR1B-203ENST00000460427 GRIN2AQ12879 1464 aa35.75■■■■□ 3.31
ACTR1B-203ENST00000460427 ERICH3Q5RHP9 1530 aa35.75■■■■□ 3.31
ACTR1B-203ENST00000460427 FHAD1B1AJZ9 1412 aa35.68■■■■□ 3.3
ACTR1B-203ENST00000460427 CEP170Q5SW79 1584 aa35.64■■■■□ 3.3
ACTR1B-203ENST00000460427 NUP160Q12769 1436 aa35.6■■■■□ 3.29
ACTR1B-203ENST00000460427 SHROOM2Q13796 1616 aa35.47■■■■□ 3.27
ACTR1B-203ENST00000460427 ERCC6L2Q5T890 1561 aa35.44■■■■□ 3.26
ACTR1B-203ENST00000460427 KIF27Q86VH2 1401 aa35.42■■■■□ 3.26
ACTR1B-203ENST00000460427 CUL7Q14999 1698 aa35.38■■■■□ 3.25
ACTR1B-203ENST00000460427 TRHP20396 242 aaPredicted RBP35.35■■■■□ 3.25
ACTR1B-203ENST00000460427 IGF1RP08069 1367 aa35.32■■■■□ 3.24
ACTR1B-203ENST00000460427 RUSC2Q8N2Y8 1516 aa35.32■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms