RNA–Protein interactions for RNA: ENST00000586502.1

CXXC1-205, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-205ENST00000586502 NISCHQ9Y2I1 1504 aa40.73■■■■■ 4.11
CXXC1-205ENST00000586502 CCDC180Q9P1Z9 1646 aa36.29■■■■□ 3.4
CXXC1-205ENST00000586502 ABCC9O60706 1549 aa35.88■■■■□ 3.33
CXXC1-205ENST00000586502 RB1CC1Q8TDY2 1594 aa34.33■■■■□ 3.09
CXXC1-205ENST00000586502 NACADO15069 1562 aa34.22■■■■□ 3.07
CXXC1-205ENST00000586502 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
CXXC1-205ENST00000586502 MYO15BQ96JP2 1530 aa33.92■■■■□ 3.02
CXXC1-205ENST00000586502 ZCCHC6Q5VYS8 1495 aaKnown RBP33.88■■■■□ 3.01
CXXC1-205ENST00000586502 DCAF1Q9Y4B6 1507 aa33.67■■■□□ 2.98
CXXC1-205ENST00000586502 PABPN1Q86U42 306 aaKnown RBP eCLIP33.5■■■□□ 2.95
CXXC1-205ENST00000586502 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
CXXC1-205ENST00000586502 BICRAQ9NZM4 1560 aa33.33■■■□□ 2.93
CXXC1-205ENST00000586502 DNAJC5BQ9UF47 199 aa33.25■■■□□ 2.91
CXXC1-205ENST00000586502 SCRIBQ14160 1630 aa33.14■■■□□ 2.9
CXXC1-205ENST00000586502 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
CXXC1-205ENST00000586502 EIF4G1Q04637 1599 aaKnown RBP32.48■■■□□ 2.79
CXXC1-205ENST00000586502 CC2D2AQ9P2K1 1620 aa32.41■■■□□ 2.78
CXXC1-205ENST00000586502 CECR2Q9BXF3 1484 aa32.27■■■□□ 2.76
CXXC1-205ENST00000586502 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
CXXC1-205ENST00000586502 NCAPD3P42695 1498 aa31.61■■■□□ 2.65
CXXC1-205ENST00000586502 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
CXXC1-205ENST00000586502 BAZ1AQ9NRL2 1556 aaPredicted RBP31.58■■■□□ 2.65
CXXC1-205ENST00000586502 SMARCA2P51531 1590 aa31.51■■■□□ 2.63
CXXC1-205ENST00000586502 HMGXB3Q12766 1538 aa31.41■■■□□ 2.62
CXXC1-205ENST00000586502 MROH2BQ7Z745 1585 aa31.4■■■□□ 2.62
CXXC1-205ENST00000586502 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
CXXC1-205ENST00000586502 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
CXXC1-205ENST00000586502 WIZO95785 1651 aa31.02■■■□□ 2.56
CXXC1-205ENST00000586502 NESP48681 1621 aa30.96■■■□□ 2.55
CXXC1-205ENST00000586502 RSF1Q96T23 1441 aaPredicted RBP30.94■■■□□ 2.54
CXXC1-205ENST00000586502 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
CXXC1-205ENST00000586502 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
CXXC1-205ENST00000586502 CUX2O14529 1486 aa30.7■■■□□ 2.51
CXXC1-205ENST00000586502 TOP2AP11388 1531 aaKnown RBP30.68■■■□□ 2.5
CXXC1-205ENST00000586502 CADPSQ9ULU8 1353 aa30.68■■■□□ 2.5
CXXC1-205ENST00000586502 PDS5BQ9NTI5 1447 aa30.63■■■□□ 2.49
CXXC1-205ENST00000586502 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
CXXC1-205ENST00000586502 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
CXXC1-205ENST00000586502 CFTRP13569 1480 aa30.43■■■□□ 2.46
CXXC1-205ENST00000586502 CCDC88BA6NC98 1476 aa30.35■■■□□ 2.45
CXXC1-205ENST00000586502 MRC2Q9UBG0 1479 aa30.33■■■□□ 2.45
CXXC1-205ENST00000586502 FANCD2Q9BXW9 1451 aa30.32■■■□□ 2.44
CXXC1-205ENST00000586502 CEP164Q9UPV0 1460 aa30.31■■■□□ 2.44
CXXC1-205ENST00000586502 WDR62O43379 1518 aa30.24■■■□□ 2.43
CXXC1-205ENST00000586502 DNAJC5Q9H3Z4 198 aa30.15■■■□□ 2.42
CXXC1-205ENST00000586502 PRDM2Q13029 1718 aa30.06■■■□□ 2.4
CXXC1-205ENST00000586502 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
CXXC1-205ENST00000586502 SUPT5HO00267 1087 aaKnown RBP29.94■■■□□ 2.38
CXXC1-205ENST00000586502 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
CXXC1-205ENST00000586502 ABCC8Q09428 1581 aa29.75■■■□□ 2.35
CXXC1-205ENST00000586502 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
CXXC1-205ENST00000586502 IFT140Q96RY7 1462 aa29.69■■■□□ 2.34
CXXC1-205ENST00000586502 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
CXXC1-205ENST00000586502 POLA1P09884 1462 aaPredicted RBP29.54■■■□□ 2.32
CXXC1-205ENST00000586502 TARBP1Q13395 1621 aaKnown RBP29.49■■■□□ 2.31
CXXC1-205ENST00000586502 CUX1P39880 1505 aa29.47■■■□□ 2.31
CXXC1-205ENST00000586502 EIF4G3O43432 1585 aaKnown RBP29.44■■■□□ 2.3
CXXC1-205ENST00000586502 RAD54L2Q9Y4B4 1467 aa29.43■■■□□ 2.3
CXXC1-205ENST00000586502 FGD5Q6ZNL6 1462 aa29.42■■■□□ 2.3
CXXC1-205ENST00000586502 SOGA1O94964 1423 aa29.41■■■□□ 2.3
CXXC1-205ENST00000586502 AQRO60306 1485 aaKnown RBP eCLIP29.4■■■□□ 2.35e-6■■■■□ 20.7
CXXC1-205ENST00000586502 OSCARQ8IYS5 282 aa29.39■■■□□ 2.3
CXXC1-205ENST00000586502 TDRD9Q8NDG6 1382 aaKnown RBP29.3■■■□□ 2.28
CXXC1-205ENST00000586502 WDR97A6NE52 1622 aa29.2■■■□□ 2.27
CXXC1-205ENST00000586502 WRNQ14191 1432 aaPredicted RBP eCLIP29.17■■■□□ 2.26
CXXC1-205ENST00000586502 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
CXXC1-205ENST00000586502 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
CXXC1-205ENST00000586502 SYNJ1O43426 1573 aa29.11■■■□□ 2.25
CXXC1-205ENST00000586502 FBLN2P98095 1184 aa29.11■■■□□ 2.25
CXXC1-205ENST00000586502 TOP2BQ02880 1626 aa29.11■■■□□ 2.25
CXXC1-205ENST00000586502 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
CXXC1-205ENST00000586502 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
CXXC1-205ENST00000586502 CHD1O14646 1710 aa29.08■■■□□ 2.25
CXXC1-205ENST00000586502 GAPVD1Q14C86 1478 aa29.05■■■□□ 2.24
CXXC1-205ENST00000586502 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
CXXC1-205ENST00000586502 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
CXXC1-205ENST00000586502 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
CXXC1-205ENST00000586502 CHMP7Q8WUX9 453 aaPredicted RBP28.97■■■□□ 2.23
CXXC1-205ENST00000586502 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
CXXC1-205ENST00000586502 SYNJ2O15056 1496 aa28.94■■■□□ 2.22
CXXC1-205ENST00000586502 RIMBP3CA6NJZ7 1639 aa28.94■■■□□ 2.22
CXXC1-205ENST00000586502 RIMBP3BA6NNM3 1639 aa28.94■■■□□ 2.22
CXXC1-205ENST00000586502 RIMBP3Q9UFD9 1639 aa28.94■■■□□ 2.22
CXXC1-205ENST00000586502 ARHGEF11O15085 1522 aa28.92■■■□□ 2.22
CXXC1-205ENST00000586502 CLASP1Q7Z460 1538 aa28.82■■■□□ 2.2
CXXC1-205ENST00000586502 ADAMTS12P58397 1594 aa28.76■■■□□ 2.19
CXXC1-205ENST00000586502 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
CXXC1-205ENST00000586502 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
CXXC1-205ENST00000586502 FHAD1B1AJZ9 1412 aa28.71■■■□□ 2.19
CXXC1-205ENST00000586502 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
CXXC1-205ENST00000586502 CYB5RLQ6IPT4 315 aa28.68■■■□□ 2.18
CXXC1-205ENST00000586502 NUP160Q12769 1436 aa28.61■■■□□ 2.17
CXXC1-205ENST00000586502 CEP170Q5SW79 1584 aa28.59■■■□□ 2.17
CXXC1-205ENST00000586502 KIF27Q86VH2 1401 aa28.58■■■□□ 2.17
CXXC1-205ENST00000586502 IGF1RP08069 1367 aa28.52■■■□□ 2.16
CXXC1-205ENST00000586502 ERCC6L2Q5T890 1561 aa28.42■■■□□ 2.14
CXXC1-205ENST00000586502 SHROOM2Q13796 1616 aa28.4■■■□□ 2.14
CXXC1-205ENST00000586502 CUL7Q14999 1698 aa28.4■■■□□ 2.14
CXXC1-205ENST00000586502 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
CXXC1-205ENST00000586502 CARMIL1Q5VZK9 1371 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms