RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 NISCHQ9Y2I1 1504 aa27.6■■■□□ 2.01
CTTN-201ENST00000301843 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
CTTN-201ENST00000301843 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
CTTN-201ENST00000301843 CCDC180Q9P1Z9 1646 aa23.58■■□□□ 1.36
CTTN-201ENST00000301843 ZCCHC6Q5VYS8 1495 aaKnown RBP23.34■■□□□ 1.33
CTTN-201ENST00000301843 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
CTTN-201ENST00000301843 MYO15BQ96JP2 1530 aa22.79■■□□□ 1.24
CTTN-201ENST00000301843 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
CTTN-201ENST00000301843 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
CTTN-201ENST00000301843 PCGF6Q9BYE7 350 aa22.61■■□□□ 1.21
CTTN-201ENST00000301843 HRCP23327 699 aa22.5■■□□□ 1.19
CTTN-201ENST00000301843 PPARGC1BQ86YN6 1023 aaKnown RBP22.44■■□□□ 1.18
CTTN-201ENST00000301843 LOC105371045A0A1W2PR82 267 aa22.41■■□□□ 1.18
CTTN-201ENST00000301843 EHMT2Q96KQ7 1210 aa22.04■■□□□ 1.12
CTTN-201ENST00000301843 ABCC9O60706 1549 aa22.01■■□□□ 1.11
CTTN-201ENST00000301843 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
CTTN-201ENST00000301843 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
CTTN-201ENST00000301843 NACADO15069 1562 aa21.79■■□□□ 1.08
CTTN-201ENST00000301843 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
CTTN-201ENST00000301843 TRIM26Q12899 539 aaPredicted RBP21.75■■□□□ 1.07
CTTN-201ENST00000301843 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
CTTN-201ENST00000301843 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
CTTN-201ENST00000301843 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
CTTN-201ENST00000301843 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
CTTN-201ENST00000301843 TTBK1Q5TCY1 1321 aaPredicted RBP21.33■■□□□ 1.01
CTTN-201ENST00000301843 WIZO95785 1651 aa21.31■■□□□ 1
CTTN-201ENST00000301843 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
CTTN-201ENST00000301843 ZEB1P37275 1124 aaPredicted RBP21.2■□□□□ 0.98
CTTN-201ENST00000301843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.19■□□□□ 0.98
CTTN-201ENST00000301843 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
CTTN-201ENST00000301843 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
CTTN-201ENST00000301843 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
CTTN-201ENST00000301843 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
CTTN-201ENST00000301843 CCER1Q8TC90 406 aaPredicted RBP21.03■□□□□ 0.96
CTTN-201ENST00000301843 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
CTTN-201ENST00000301843 CCDC88BA6NC98 1476 aa20.89■□□□□ 0.93
CTTN-201ENST00000301843 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
CTTN-201ENST00000301843 BICRAQ9NZM4 1560 aa20.86■□□□□ 0.93
CTTN-201ENST00000301843 ABCC8Q09428 1581 aa20.83■□□□□ 0.93
CTTN-201ENST00000301843 NEUROD1Q13562 356 aa20.77■□□□□ 0.92
CTTN-201ENST00000301843 PABPN1Q86U42 306 aaKnown RBP eCLIP20.77■□□□□ 0.928e-7■■■□□ 16.3
CTTN-201ENST00000301843 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
CTTN-201ENST00000301843 SOGA1O94964 1423 aa20.7■□□□□ 0.91
CTTN-201ENST00000301843 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.9
CTTN-201ENST00000301843 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
CTTN-201ENST00000301843 RANGAP1P46060 587 aaPredicted RBP20.66■□□□□ 0.9
CTTN-201ENST00000301843 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
CTTN-201ENST00000301843 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.89
CTTN-201ENST00000301843 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
CTTN-201ENST00000301843 GTF3C3Q9Y5Q9 886 aa20.59■□□□□ 0.89
CTTN-201ENST00000301843 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
CTTN-201ENST00000301843 HNRNPUL2Q1KMD3 747 aaKnown RBP20.57■□□□□ 0.88
CTTN-201ENST00000301843 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
CTTN-201ENST00000301843 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
CTTN-201ENST00000301843 EEA1Q15075 1411 aa20.51■□□□□ 0.87
CTTN-201ENST00000301843 PELP1Q8IZL8 1130 aaKnown RBP20.49■□□□□ 0.87
CTTN-201ENST00000301843 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
CTTN-201ENST00000301843 TNIKQ9UKE5 1360 aa20.44■□□□□ 0.86
CTTN-201ENST00000301843 BAZ1BQ9UIG0 1483 aaKnown RBP20.44■□□□□ 0.86
CTTN-201ENST00000301843 CENPBP07199 599 aaPredicted RBP20.41■□□□□ 0.86
CTTN-201ENST00000301843 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
CTTN-201ENST00000301843 ZNF316A6NFI3 1004 aaPredicted RBP20.36■□□□□ 0.85
CTTN-201ENST00000301843 GOLGA3Q08378 1498 aa20.34■□□□□ 0.85
CTTN-201ENST00000301843 MIER1Q8N108 512 aa20.31■□□□□ 0.84
CTTN-201ENST00000301843 KIF21BO75037 1637 aa20.24■□□□□ 0.83
CTTN-201ENST00000301843 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
CTTN-201ENST00000301843 APLP2Q06481 763 aa20.2■□□□□ 0.82
CTTN-201ENST00000301843 CLIP1P30622 1438 aa20.18■□□□□ 0.82
CTTN-201ENST00000301843 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
CTTN-201ENST00000301843 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
CTTN-201ENST00000301843 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
CTTN-201ENST00000301843 BIVM-ERCC5R4GMW8 1640 aa20.11■□□□□ 0.81
CTTN-201ENST00000301843 RAPGEF2Q9Y4G8 1499 aa20.11■□□□□ 0.81
CTTN-201ENST00000301843 ITGAEP38570 1179 aa20.03■□□□□ 0.8
CTTN-201ENST00000301843 VPS8Q8N3P4 1428 aa20.01■□□□□ 0.79
CTTN-201ENST00000301843 KANK4Q5T7N3 995 aaPredicted RBP19.99■□□□□ 0.79
CTTN-201ENST00000301843 CUX1P39880 1505 aa19.96■□□□□ 0.79
CTTN-201ENST00000301843 CFTRP13569 1480 aa19.96■□□□□ 0.79
CTTN-201ENST00000301843 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
CTTN-201ENST00000301843 PRXQ9BXM0 1461 aa19.93■□□□□ 0.78
CTTN-201ENST00000301843 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
CTTN-201ENST00000301843 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
CTTN-201ENST00000301843 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
CTTN-201ENST00000301843 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
CTTN-201ENST00000301843 KCNH8Q96L42 1107 aa19.77■□□□□ 0.76
CTTN-201ENST00000301843 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
CTTN-201ENST00000301843 ATP1B4Q9UN42 357 aaPredicted RBP19.7■□□□□ 0.74
CTTN-201ENST00000301843 P3H3Q8IVL6 736 aa19.67■□□□□ 0.74
CTTN-201ENST00000301843 CC2D2AQ9P2K1 1620 aa19.66■□□□□ 0.74
CTTN-201ENST00000301843 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
CTTN-201ENST00000301843 HIRIP3Q9BW71 556 aaPredicted RBP19.66■□□□□ 0.74
CTTN-201ENST00000301843 CUX2O14529 1486 aa19.65■□□□□ 0.74
CTTN-201ENST00000301843 IGF1RP08069 1367 aa19.63■□□□□ 0.73
CTTN-201ENST00000301843 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
CTTN-201ENST00000301843 BCANQ96GW7 911 aa19.63■□□□□ 0.73
CTTN-201ENST00000301843 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
CTTN-201ENST00000301843 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
CTTN-201ENST00000301843 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
CTTN-201ENST00000301843 CCNB3Q8WWL7 1395 aa19.58■□□□□ 0.73
CTTN-201ENST00000301843 DDX10Q13206 875 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms