RNA–Protein interactions for RNA: ENST00000494873.1

RNF11-203, Transcript of ring finger protein 11, humanhuman

TSL 3

Gene RNF11, Length 953 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11-203ENST00000494873 NISCHQ9Y2I1 1504 aa56.97■■■■■ 6.71
RNF11-203ENST00000494873 CCDC180Q9P1Z9 1646 aa50.98■■■■■ 5.75
RNF11-203ENST00000494873 ABCC9O60706 1549 aa50.6■■■■■ 5.69
RNF11-203ENST00000494873 RB1CC1Q8TDY2 1594 aa48.36■■■■■ 5.33
RNF11-203ENST00000494873 NACADO15069 1562 aa48.13■■■■■ 5.29
RNF11-203ENST00000494873 DCAF8L2P0C7V8 631 aa47.91■■■■■ 5.26
RNF11-203ENST00000494873 MYO15BQ96JP2 1530 aa47.61■■■■■ 5.21
RNF11-203ENST00000494873 ZCCHC6Q5VYS8 1495 aaKnown RBP47.31■■■■■ 5.16
RNF11-203ENST00000494873 PABPN1Q86U42 306 aaKnown RBP eCLIP47.15■■■■■ 5.14
RNF11-203ENST00000494873 UNC13AQ9UPW8 1703 aa47.14■■■■■ 5.14
RNF11-203ENST00000494873 DCAF1Q9Y4B6 1507 aa47.12■■■■■ 5.13
RNF11-203ENST00000494873 DNAJC5BQ9UF47 199 aa47.07■■■■■ 5.13
RNF11-203ENST00000494873 BICRAQ9NZM4 1560 aa46.88■■■■■ 5.1
RNF11-203ENST00000494873 SCRIBQ14160 1630 aa46.44■■■■■ 5.03
RNF11-203ENST00000494873 SHROOM4Q9ULL8 1493 aa46.41■■■■■ 5.02
RNF11-203ENST00000494873 EIF4G1Q04637 1599 aaKnown RBP45.72■■■■■ 4.91
RNF11-203ENST00000494873 CC2D2AQ9P2K1 1620 aa45.71■■■■■ 4.91
RNF11-203ENST00000494873 CECR2Q9BXF3 1484 aa45.56■■■■■ 4.88
RNF11-203ENST00000494873 NCAPD3P42695 1498 aa44.41■■■■■ 4.7
RNF11-203ENST00000494873 SMARCA4P51532 1647 aa44.35■■■■■ 4.69
RNF11-203ENST00000494873 ATAD2BQ9ULI0 1458 aa44.32■■■■■ 4.69
RNF11-203ENST00000494873 SMARCA2P51531 1590 aa44.25■■■■■ 4.67
RNF11-203ENST00000494873 BAZ1AQ9NRL2 1556 aaPredicted RBP44.23■■■■■ 4.67
RNF11-203ENST00000494873 HMGXB3Q12766 1538 aa44.14■■■■■ 4.66
RNF11-203ENST00000494873 PEG3Q9GZU2 1588 aa43.94■■■■■ 4.62
RNF11-203ENST00000494873 BAZ1BQ9UIG0 1483 aaKnown RBP43.93■■■■■ 4.62
RNF11-203ENST00000494873 MROH2BQ7Z745 1585 aa43.88■■■■■ 4.62
RNF11-203ENST00000494873 ERCC6Q03468 1493 aa43.7■■■■■ 4.59
RNF11-203ENST00000494873 NESP48681 1621 aa43.55■■■■■ 4.56
RNF11-203ENST00000494873 CUX2O14529 1486 aa43.51■■■■■ 4.56
RNF11-203ENST00000494873 LAMC3Q9Y6N6 1575 aa43.36■■■■■ 4.53
RNF11-203ENST00000494873 WIZO95785 1651 aa43.34■■■■■ 4.53
RNF11-203ENST00000494873 RSF1Q96T23 1441 aaPredicted RBP43.13■■■■■ 4.49
RNF11-203ENST00000494873 PDS5BQ9NTI5 1447 aa43.12■■■■■ 4.49
RNF11-203ENST00000494873 CADPSQ9ULU8 1353 aa43.08■■■■■ 4.49
RNF11-203ENST00000494873 THOC2Q8NI27 1593 aaKnown RBP43.05■■■■■ 4.48
RNF11-203ENST00000494873 DNAJC5Q9H3Z4 198 aa43.02■■■■■ 4.48
RNF11-203ENST00000494873 KIF21AQ7Z4S6 1674 aa42.98■■■■■ 4.47
RNF11-203ENST00000494873 TOP2AP11388 1531 aaKnown RBP42.89■■■■■ 4.46
RNF11-203ENST00000494873 MRC2Q9UBG0 1479 aa42.71■■■■■ 4.43
RNF11-203ENST00000494873 CFTRP13569 1480 aa42.67■■■■■ 4.42
RNF11-203ENST00000494873 CEP164Q9UPV0 1460 aa42.62■■■■■ 4.41
RNF11-203ENST00000494873 FANCD2Q9BXW9 1451 aa42.59■■■■■ 4.41
RNF11-203ENST00000494873 WDR62O43379 1518 aa42.58■■■■■ 4.41
RNF11-203ENST00000494873 CCDC88BA6NC98 1476 aa42.37■■■■■ 4.37
RNF11-203ENST00000494873 PRDM2Q13029 1718 aa42.21■■■■■ 4.35
RNF11-203ENST00000494873 URB2Q14146 1524 aaKnown RBP42.2■■■■■ 4.35
RNF11-203ENST00000494873 TOPBP1Q92547 1522 aa41.82■■■■■ 4.29
RNF11-203ENST00000494873 ABCC8Q09428 1581 aa41.8■■■■■ 4.28
RNF11-203ENST00000494873 IFT140Q96RY7 1462 aa41.76■■■■■ 4.28
RNF11-203ENST00000494873 DNMBPQ6XZF7 1577 aa41.71■■■■■ 4.27
RNF11-203ENST00000494873 ZNF608Q9ULD9 1512 aaPredicted RBP41.6■■■■■ 4.25
RNF11-203ENST00000494873 OSCARQ8IYS5 282 aa41.57■■■■■ 4.25
RNF11-203ENST00000494873 SUPT5HO00267 1087 aaKnown RBP41.48■■■■■ 4.23
RNF11-203ENST00000494873 POLA1P09884 1462 aaPredicted RBP41.41■■■■■ 4.22
RNF11-203ENST00000494873 EIF4G3O43432 1585 aaKnown RBP41.41■■■■■ 4.22
RNF11-203ENST00000494873 TARBP1Q13395 1621 aaKnown RBP41.4■■■■■ 4.22
RNF11-203ENST00000494873 TRIM41Q8WV44 630 aa41.28■■■■■ 4.2
RNF11-203ENST00000494873 AQRO60306 1485 aaKnown RBP eCLIP41.28■■■■■ 4.2
RNF11-203ENST00000494873 SOGA1O94964 1423 aa41.24■■■■■ 4.19
RNF11-203ENST00000494873 RAD54L2Q9Y4B4 1467 aa41.23■■■■■ 4.19
RNF11-203ENST00000494873 CUX1P39880 1505 aa41.22■■■■■ 4.19
RNF11-203ENST00000494873 FGD5Q6ZNL6 1462 aa41.21■■■■■ 4.19
RNF11-203ENST00000494873 TDRD9Q8NDG6 1382 aaKnown RBP41.1■■■■■ 4.17
RNF11-203ENST00000494873 WDR97A6NE52 1622 aa41.07■■■■■ 4.16
RNF11-203ENST00000494873 CHD1O14646 1710 aa40.98■■■■■ 4.15
RNF11-203ENST00000494873 FBLN2P98095 1184 aa40.95■■■■■ 4.15
RNF11-203ENST00000494873 RIMBP3CA6NJZ7 1639 aa40.94■■■■■ 4.14
RNF11-203ENST00000494873 RIMBP3BA6NNM3 1639 aa40.94■■■■■ 4.14
RNF11-203ENST00000494873 RIMBP3Q9UFD9 1639 aa40.94■■■■■ 4.14
RNF11-203ENST00000494873 SNAPC4Q5SXM2 1469 aa40.9■■■■■ 4.14
RNF11-203ENST00000494873 ARHGEF11O15085 1522 aa40.88■■■■■ 4.13
RNF11-203ENST00000494873 GRIN2BQ13224 1484 aa40.87■■■■■ 4.13
RNF11-203ENST00000494873 MAGI1Q96QZ7 1491 aaPredicted RBP40.83■■■■■ 4.13
RNF11-203ENST00000494873 ABCA10Q8WWZ4 1543 aa40.78■■■■■ 4.12
RNF11-203ENST00000494873 GAPVD1Q14C86 1478 aa40.75■■■■■ 4.11
RNF11-203ENST00000494873 CHMP7Q8WUX9 453 aaPredicted RBP40.73■■■■■ 4.11
RNF11-203ENST00000494873 WRNQ14191 1432 aaPredicted RBP eCLIP40.71■■■■■ 4.11
RNF11-203ENST00000494873 SYNJ2O15056 1496 aa40.68■■■■■ 4.1
RNF11-203ENST00000494873 TOP2BQ02880 1626 aa40.67■■■■■ 4.1
RNF11-203ENST00000494873 ABCA5Q8WWZ7 1642 aa40.67■■■■■ 4.1
RNF11-203ENST00000494873 PBRM1Q86U86 1689 aa40.66■■■■■ 4.1
RNF11-203ENST00000494873 BIVM-ERCC5R4GMW8 1640 aa40.66■■■■■ 4.1
RNF11-203ENST00000494873 SYNJ1O43426 1573 aa40.61■■■■■ 4.09
RNF11-203ENST00000494873 CLASP1Q7Z460 1538 aa40.57■■■■■ 4.09
RNF11-203ENST00000494873 CYB5RLQ6IPT4 315 aa40.54■■■■■ 4.08
RNF11-203ENST00000494873 ARAP1Q96P48 1450 aa40.5■■■■■ 4.07
RNF11-203ENST00000494873 ADAMTS12P58397 1594 aa40.34■■■■■ 4.05
RNF11-203ENST00000494873 GRIN2AQ12879 1464 aa40.32■■■■■ 4.05
RNF11-203ENST00000494873 ERICH3Q5RHP9 1530 aa40.28■■■■■ 4.04
RNF11-203ENST00000494873 FHAD1B1AJZ9 1412 aa40.27■■■■■ 4.04
RNF11-203ENST00000494873 NUP160Q12769 1436 aa40.18■■■■■ 4.02
RNF11-203ENST00000494873 CEP170Q5SW79 1584 aa40.13■■■■■ 4.01
RNF11-203ENST00000494873 TRHP20396 242 aaPredicted RBP39.99■■■■□ 3.99
RNF11-203ENST00000494873 SHROOM2Q13796 1616 aa39.93■■■■□ 3.98
RNF11-203ENST00000494873 ERCC6L2Q5T890 1561 aa39.93■■■■□ 3.98
RNF11-203ENST00000494873 KIF27Q86VH2 1401 aa39.92■■■■□ 3.98
RNF11-203ENST00000494873 IGF1RP08069 1367 aa39.83■■■■□ 3.97
RNF11-203ENST00000494873 CUL7Q14999 1698 aa39.76■■■■□ 3.96
RNF11-203ENST00000494873 RUSC2Q8N2Y8 1516 aa39.76■■■■□ 3.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms