RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 NISCHQ9Y2I1 1504 aa36.3■■■■□ 3.4
CXXC1-208ENST00000587170 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
CXXC1-208ENST00000587170 ABCC9O60706 1549 aa32.82■■■□□ 2.85
CXXC1-208ENST00000587170 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
CXXC1-208ENST00000587170 NACADO15069 1562 aa31.03■■■□□ 2.56
CXXC1-208ENST00000587170 DNAJC5BQ9UF47 199 aa30.93■■■□□ 2.54
CXXC1-208ENST00000587170 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
CXXC1-208ENST00000587170 MYO15BQ96JP2 1530 aa30.58■■■□□ 2.49
CXXC1-208ENST00000587170 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
CXXC1-208ENST00000587170 PABPN1Q86U42 306 aaKnown RBP eCLIP30.35■■■□□ 2.45
CXXC1-208ENST00000587170 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
CXXC1-208ENST00000587170 DCAF1Q9Y4B6 1507 aa30.08■■■□□ 2.41
CXXC1-208ENST00000587170 ZCCHC6Q5VYS8 1495 aaKnown RBP30.08■■■□□ 2.41
CXXC1-208ENST00000587170 SHROOM4Q9ULL8 1493 aa30.06■■■□□ 2.4
CXXC1-208ENST00000587170 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
CXXC1-208ENST00000587170 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
CXXC1-208ENST00000587170 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
CXXC1-208ENST00000587170 CECR2Q9BXF3 1484 aa29.63■■■□□ 2.33
CXXC1-208ENST00000587170 DNAJC5Q9H3Z4 198 aa28.63■■■□□ 2.17
CXXC1-208ENST00000587170 NCAPD3P42695 1498 aa28.58■■■□□ 2.17
CXXC1-208ENST00000587170 CUX2O14529 1486 aa28.53■■■□□ 2.16
CXXC1-208ENST00000587170 HMGXB3Q12766 1538 aa28.46■■■□□ 2.15
CXXC1-208ENST00000587170 SMARCA4P51532 1647 aa28.45■■■□□ 2.14
CXXC1-208ENST00000587170 ATAD2BQ9ULI0 1458 aa28.43■■■□□ 2.14
CXXC1-208ENST00000587170 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
CXXC1-208ENST00000587170 ERCC6Q03468 1493 aa28.35■■■□□ 2.13
CXXC1-208ENST00000587170 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
CXXC1-208ENST00000587170 BAZ1AQ9NRL2 1556 aaPredicted RBP28.23■■■□□ 2.11
CXXC1-208ENST00000587170 NESP48681 1621 aa28.16■■■□□ 2.1
CXXC1-208ENST00000587170 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
CXXC1-208ENST00000587170 THOC2Q8NI27 1593 aaKnown RBP28.12■■■□□ 2.09
CXXC1-208ENST00000587170 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
CXXC1-208ENST00000587170 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
CXXC1-208ENST00000587170 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
CXXC1-208ENST00000587170 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
CXXC1-208ENST00000587170 WIZO95785 1651 aa27.65■■■□□ 2.02
CXXC1-208ENST00000587170 WDR62O43379 1518 aa27.62■■■□□ 2.01
CXXC1-208ENST00000587170 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
CXXC1-208ENST00000587170 MRC2Q9UBG0 1479 aa27.59■■■□□ 2.01
CXXC1-208ENST00000587170 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
CXXC1-208ENST00000587170 PRDM2Q13029 1718 aa27.35■■□□□ 1.97
CXXC1-208ENST00000587170 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
CXXC1-208ENST00000587170 CFTRP13569 1480 aa27.32■■□□□ 1.96
CXXC1-208ENST00000587170 TOP2AP11388 1531 aaKnown RBP27.29■■□□□ 1.96
CXXC1-208ENST00000587170 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
CXXC1-208ENST00000587170 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
CXXC1-208ENST00000587170 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
CXXC1-208ENST00000587170 OSCARQ8IYS5 282 aa26.95■■□□□ 1.9
CXXC1-208ENST00000587170 RIMBP3CA6NJZ7 1639 aa26.89■■□□□ 1.9
CXXC1-208ENST00000587170 RIMBP3BA6NNM3 1639 aa26.89■■□□□ 1.9
CXXC1-208ENST00000587170 RIMBP3Q9UFD9 1639 aa26.89■■□□□ 1.9
CXXC1-208ENST00000587170 CCDC88BA6NC98 1476 aa26.87■■□□□ 1.89
CXXC1-208ENST00000587170 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
CXXC1-208ENST00000587170 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
CXXC1-208ENST00000587170 ZNF608Q9ULD9 1512 aaPredicted RBP26.83■■□□□ 1.89
CXXC1-208ENST00000587170 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
CXXC1-208ENST00000587170 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
CXXC1-208ENST00000587170 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
CXXC1-208ENST00000587170 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
CXXC1-208ENST00000587170 ARHGEF11O15085 1522 aa26.72■■□□□ 1.87
CXXC1-208ENST00000587170 CHD1O14646 1710 aa26.72■■□□□ 1.87
CXXC1-208ENST00000587170 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
CXXC1-208ENST00000587170 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
CXXC1-208ENST00000587170 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.837e-6■■□□□ 13.1
CXXC1-208ENST00000587170 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
CXXC1-208ENST00000587170 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
CXXC1-208ENST00000587170 CLASP1Q7Z460 1538 aa26.35■■□□□ 1.81
CXXC1-208ENST00000587170 FGD5Q6ZNL6 1462 aa26.31■■□□□ 1.8
CXXC1-208ENST00000587170 SOGA1O94964 1423 aa26.3■■□□□ 1.8
CXXC1-208ENST00000587170 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
CXXC1-208ENST00000587170 CUX1P39880 1505 aa26.29■■□□□ 1.8
CXXC1-208ENST00000587170 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
CXXC1-208ENST00000587170 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
CXXC1-208ENST00000587170 PBRM1Q86U86 1689 aa26.27■■□□□ 1.8
CXXC1-208ENST00000587170 SYNJ1O43426 1573 aa26.26■■□□□ 1.79
CXXC1-208ENST00000587170 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
CXXC1-208ENST00000587170 GRIN2BQ13224 1484 aa26.18■■□□□ 1.78
CXXC1-208ENST00000587170 FBLN2P98095 1184 aa26.18■■□□□ 1.78
CXXC1-208ENST00000587170 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
CXXC1-208ENST00000587170 ABCA5Q8WWZ7 1642 aa26.14■■□□□ 1.78
CXXC1-208ENST00000587170 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
CXXC1-208ENST00000587170 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
CXXC1-208ENST00000587170 TRHP20396 242 aaPredicted RBP26.02■■□□□ 1.76
CXXC1-208ENST00000587170 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
CXXC1-208ENST00000587170 BIVM-ERCC5R4GMW8 1640 aa25.94■■□□□ 1.74
CXXC1-208ENST00000587170 ADAMTS12P58397 1594 aa25.93■■□□□ 1.74
CXXC1-208ENST00000587170 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
CXXC1-208ENST00000587170 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
CXXC1-208ENST00000587170 TOP2BQ02880 1626 aa25.86■■□□□ 1.73
CXXC1-208ENST00000587170 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
CXXC1-208ENST00000587170 ERCC6L2Q5T890 1561 aa25.84■■□□□ 1.73
CXXC1-208ENST00000587170 NUP160Q12769 1436 aa25.81■■□□□ 1.72
CXXC1-208ENST00000587170 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.72
CXXC1-208ENST00000587170 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
CXXC1-208ENST00000587170 KIF13AQ9H1H9 1805 aa25.71■■□□□ 1.71
CXXC1-208ENST00000587170 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.7
CXXC1-208ENST00000587170 RUSC2Q8N2Y8 1516 aa25.59■■□□□ 1.69
CXXC1-208ENST00000587170 SUPT5HO00267 1087 aaKnown RBP25.53■■□□□ 1.68
CXXC1-208ENST00000587170 PRG4Q92954 1404 aaPredicted RBP25.47■■□□□ 1.67
CXXC1-208ENST00000587170 AEBP2Q6ZN18 517 aaPredicted RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms