RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
CTTN-202ENST00000346329 DCAF8L2P0C7V8 631 aa28.51■■■□□ 2.15
CTTN-202ENST00000346329 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
CTTN-202ENST00000346329 SUPT5HO00267 1087 aaKnown RBP27.18■■□□□ 1.94
CTTN-202ENST00000346329 ABCC9O60706 1549 aa26.96■■□□□ 1.91
CTTN-202ENST00000346329 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
CTTN-202ENST00000346329 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.84
CTTN-202ENST00000346329 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.778e-7■■■□□ 16.3
CTTN-202ENST00000346329 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
CTTN-202ENST00000346329 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
CTTN-202ENST00000346329 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
CTTN-202ENST00000346329 CECR2Q9BXF3 1484 aa25.4■■□□□ 1.66
CTTN-202ENST00000346329 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
CTTN-202ENST00000346329 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
CTTN-202ENST00000346329 NACADO15069 1562 aa25.2■■□□□ 1.63
CTTN-202ENST00000346329 RB1CC1Q8TDY2 1594 aa25.17■■□□□ 1.62
CTTN-202ENST00000346329 LOC105371045A0A1W2PR82 267 aa25.15■■□□□ 1.62
CTTN-202ENST00000346329 RSF1Q96T23 1441 aaPredicted RBP25.13■■□□□ 1.61
CTTN-202ENST00000346329 MROH2BQ7Z745 1585 aa25■■□□□ 1.59
CTTN-202ENST00000346329 MYO15BQ96JP2 1530 aa24.95■■□□□ 1.58
CTTN-202ENST00000346329 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
CTTN-202ENST00000346329 WIZO95785 1651 aa24.8■■□□□ 1.56
CTTN-202ENST00000346329 UNC13AQ9UPW8 1703 aa24.67■■□□□ 1.54
CTTN-202ENST00000346329 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.53
CTTN-202ENST00000346329 PPARGC1BQ86YN6 1023 aaKnown RBP24.64■■□□□ 1.53
CTTN-202ENST00000346329 TTBK1Q5TCY1 1321 aaPredicted RBP24.63■■□□□ 1.53
CTTN-202ENST00000346329 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
CTTN-202ENST00000346329 DNAJC5BQ9UF47 199 aa24.41■■□□□ 1.5
CTTN-202ENST00000346329 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.5
CTTN-202ENST00000346329 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
CTTN-202ENST00000346329 PCGF6Q9BYE7 350 aa24.3■■□□□ 1.48
CTTN-202ENST00000346329 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
CTTN-202ENST00000346329 ABCC8Q09428 1581 aa24.27■■□□□ 1.48
CTTN-202ENST00000346329 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
CTTN-202ENST00000346329 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
CTTN-202ENST00000346329 UBTFP17480 764 aaKnown RBP24.09■■□□□ 1.45
CTTN-202ENST00000346329 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
CTTN-202ENST00000346329 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
CTTN-202ENST00000346329 SOGA1O94964 1423 aa23.95■■□□□ 1.42
CTTN-202ENST00000346329 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.42
CTTN-202ENST00000346329 RUSC2Q8N2Y8 1516 aa23.92■■□□□ 1.42
CTTN-202ENST00000346329 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
CTTN-202ENST00000346329 CSRNP3Q8WYN3 585 aa23.71■■□□□ 1.39
CTTN-202ENST00000346329 CC2D2AQ9P2K1 1620 aa23.68■■□□□ 1.38
CTTN-202ENST00000346329 NESP48681 1621 aa23.67■■□□□ 1.38
CTTN-202ENST00000346329 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.37
CTTN-202ENST00000346329 P3H3Q8IVL6 736 aa23.58■■□□□ 1.36
CTTN-202ENST00000346329 NCAPD3P42695 1498 aa23.52■■□□□ 1.36
CTTN-202ENST00000346329 SYNJ1O43426 1573 aa23.5■■□□□ 1.35
CTTN-202ENST00000346329 PEG3Q9GZU2 1588 aa23.38■■□□□ 1.33
CTTN-202ENST00000346329 ARID3CA6NKF2 412 aa23.38■■□□□ 1.33
CTTN-202ENST00000346329 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
CTTN-202ENST00000346329 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.33
CTTN-202ENST00000346329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.28■■□□□ 1.32
CTTN-202ENST00000346329 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
CTTN-202ENST00000346329 FBLN2P98095 1184 aa23.26■■□□□ 1.31
CTTN-202ENST00000346329 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
CTTN-202ENST00000346329 ITGAEP38570 1179 aa23.26■■□□□ 1.31
CTTN-202ENST00000346329 RAD54L2Q9Y4B4 1467 aa23.25■■□□□ 1.31
CTTN-202ENST00000346329 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
CTTN-202ENST00000346329 RAPGEF2Q9Y4G8 1499 aa23.25■■□□□ 1.31
CTTN-202ENST00000346329 CUX1P39880 1505 aa23.22■■□□□ 1.31
CTTN-202ENST00000346329 CFTRP13569 1480 aa23.21■■□□□ 1.31
CTTN-202ENST00000346329 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
CTTN-202ENST00000346329 CUX2O14529 1486 aa23.2■■□□□ 1.3
CTTN-202ENST00000346329 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
CTTN-202ENST00000346329 APLP2Q06481 763 aa23.19■■□□□ 1.3
CTTN-202ENST00000346329 FGD5Q6ZNL6 1462 aa23.08■■□□□ 1.28
CTTN-202ENST00000346329 HRCP23327 699 aa23.06■■□□□ 1.28
CTTN-202ENST00000346329 CLIP1P30622 1438 aa23.04■■□□□ 1.28
CTTN-202ENST00000346329 GOLGA3Q08378 1498 aa23.03■■□□□ 1.28
CTTN-202ENST00000346329 KIF27Q86VH2 1401 aa23■■□□□ 1.27
CTTN-202ENST00000346329 TNIKQ9UKE5 1360 aa22.99■■□□□ 1.27
CTTN-202ENST00000346329 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
CTTN-202ENST00000346329 KANK4Q5T7N3 995 aaPredicted RBP22.95■■□□□ 1.26
CTTN-202ENST00000346329 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
CTTN-202ENST00000346329 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
CTTN-202ENST00000346329 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
CTTN-202ENST00000346329 IGF1RP08069 1367 aa22.92■■□□□ 1.26
CTTN-202ENST00000346329 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
CTTN-202ENST00000346329 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.258e-8■■■■□ 25.6
CTTN-202ENST00000346329 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
CTTN-202ENST00000346329 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
CTTN-202ENST00000346329 TOPBP1Q92547 1522 aa22.83■■□□□ 1.25
CTTN-202ENST00000346329 EEA1Q15075 1411 aa22.83■■□□□ 1.25
CTTN-202ENST00000346329 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
CTTN-202ENST00000346329 FAM50AQ14320 339 aaKnown RBP22.73■■□□□ 1.23
CTTN-202ENST00000346329 KIF21AQ7Z4S6 1674 aa22.69■■□□□ 1.22
CTTN-202ENST00000346329 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
CTTN-202ENST00000346329 FHOD3Q2V2M9 1422 aa22.68■■□□□ 1.22
CTTN-202ENST00000346329 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
CTTN-202ENST00000346329 CHMP7Q8WUX9 453 aaPredicted RBP22.66■■□□□ 1.22
CTTN-202ENST00000346329 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
CTTN-202ENST00000346329 PRXQ9BXM0 1461 aa22.65■■□□□ 1.22
CTTN-202ENST00000346329 KIF21BO75037 1637 aa22.59■■□□□ 1.21
CTTN-202ENST00000346329 GAPVD1Q14C86 1478 aa22.57■■□□□ 1.2
CTTN-202ENST00000346329 VPS8Q8N3P4 1428 aa22.56■■□□□ 1.2
CTTN-202ENST00000346329 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
CTTN-202ENST00000346329 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
CTTN-202ENST00000346329 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms