RNA–Protein interactions for RNA: ENST00000419616.5

RAD23B-203, Transcript of RAD23 homolog B, nucleotide excision repair protein, humanhuman

TSL 3

Gene RAD23B, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23B-203ENST00000419616 NISCHQ9Y2I1 1504 aa46.28■■■■■ 5
RAD23B-203ENST00000419616 CCDC180Q9P1Z9 1646 aa41.29■■■■■ 4.2
RAD23B-203ENST00000419616 ABCC9O60706 1549 aa40.8■■■■■ 4.12
RAD23B-203ENST00000419616 RB1CC1Q8TDY2 1594 aa39.08■■■■□ 3.85
RAD23B-203ENST00000419616 DCAF8L2P0C7V8 631 aa39.07■■■■□ 3.85
RAD23B-203ENST00000419616 NACADO15069 1562 aa38.91■■■■□ 3.82
RAD23B-203ENST00000419616 MYO15BQ96JP2 1530 aa38.49■■■■□ 3.75
RAD23B-203ENST00000419616 ZCCHC6Q5VYS8 1495 aaKnown RBP38.46■■■■□ 3.75
RAD23B-203ENST00000419616 DCAF1Q9Y4B6 1507 aa38.22■■■■□ 3.71
RAD23B-203ENST00000419616 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
RAD23B-203ENST00000419616 PABPN1Q86U42 306 aaKnown RBP eCLIP38.11■■■■□ 3.69
RAD23B-203ENST00000419616 BICRAQ9NZM4 1560 aa37.81■■■■□ 3.64
RAD23B-203ENST00000419616 SCRIBQ14160 1630 aa37.72■■■■□ 3.63
RAD23B-203ENST00000419616 DNAJC5BQ9UF47 199 aa37.68■■■■□ 3.62
RAD23B-203ENST00000419616 SHROOM4Q9ULL8 1493 aa37.39■■■■□ 3.58
RAD23B-203ENST00000419616 EIF4G1Q04637 1599 aaKnown RBP36.91■■■■□ 3.5
RAD23B-203ENST00000419616 CC2D2AQ9P2K1 1620 aa36.85■■■■□ 3.49
RAD23B-203ENST00000419616 CECR2Q9BXF3 1484 aa36.68■■■■□ 3.46
RAD23B-203ENST00000419616 SMARCA4P51532 1647 aa36■■■■□ 3.35
RAD23B-203ENST00000419616 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
RAD23B-203ENST00000419616 NCAPD3P42695 1498 aa35.88■■■■□ 3.33
RAD23B-203ENST00000419616 ATAD2BQ9ULI0 1458 aa35.87■■■■□ 3.33
RAD23B-203ENST00000419616 SMARCA2P51531 1590 aa35.85■■■■□ 3.33
RAD23B-203ENST00000419616 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
RAD23B-203ENST00000419616 MROH2BQ7Z745 1585 aa35.67■■■■□ 3.3
RAD23B-203ENST00000419616 BAZ1BQ9UIG0 1483 aaKnown RBP35.63■■■■□ 3.29
RAD23B-203ENST00000419616 PEG3Q9GZU2 1588 aa35.58■■■■□ 3.29
RAD23B-203ENST00000419616 WIZO95785 1651 aa35.3■■■■□ 3.24
RAD23B-203ENST00000419616 ERCC6Q03468 1493 aa35.25■■■■□ 3.23
RAD23B-203ENST00000419616 NESP48681 1621 aa35.17■■■■□ 3.22
RAD23B-203ENST00000419616 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
RAD23B-203ENST00000419616 LAMC3Q9Y6N6 1575 aa35.04■■■■□ 3.2
RAD23B-203ENST00000419616 CUX2O14529 1486 aa34.9■■■■□ 3.18
RAD23B-203ENST00000419616 TOP2AP11388 1531 aaKnown RBP34.88■■■■□ 3.17
RAD23B-203ENST00000419616 CADPSQ9ULU8 1353 aa34.87■■■■□ 3.17
RAD23B-203ENST00000419616 PDS5BQ9NTI5 1447 aa34.85■■■■□ 3.17
RAD23B-203ENST00000419616 DNAJC5Q9H3Z4 198 aa34.84■■■■□ 3.17
RAD23B-203ENST00000419616 KIF21AQ7Z4S6 1674 aa34.76■■■■□ 3.15
RAD23B-203ENST00000419616 THOC2Q8NI27 1593 aaKnown RBP34.66■■■■□ 3.14
RAD23B-203ENST00000419616 CFTRP13569 1480 aa34.55■■■■□ 3.12
RAD23B-203ENST00000419616 CCDC88BA6NC98 1476 aa34.49■■■■□ 3.11
RAD23B-203ENST00000419616 FANCD2Q9BXW9 1451 aa34.49■■■■□ 3.11
RAD23B-203ENST00000419616 CEP164Q9UPV0 1460 aa34.49■■■■□ 3.11
RAD23B-203ENST00000419616 MRC2Q9UBG0 1479 aa34.48■■■■□ 3.11
RAD23B-203ENST00000419616 WDR62O43379 1518 aa34.34■■■■□ 3.09
RAD23B-203ENST00000419616 PRDM2Q13029 1718 aa34.3■■■■□ 3.08
RAD23B-203ENST00000419616 SUPT5HO00267 1087 aaKnown RBP34.19■■■■□ 3.06
RAD23B-203ENST00000419616 URB2Q14146 1524 aaKnown RBP34.12■■■■□ 3.05
RAD23B-203ENST00000419616 ABCC8Q09428 1581 aa33.89■■■■□ 3.02
RAD23B-203ENST00000419616 TOPBP1Q92547 1522 aa33.88■■■■□ 3.01
RAD23B-203ENST00000419616 DNMBPQ6XZF7 1577 aa33.81■■■■□ 3
RAD23B-203ENST00000419616 IFT140Q96RY7 1462 aa33.76■■■□□ 2.99
RAD23B-203ENST00000419616 ZNF608Q9ULD9 1512 aaPredicted RBP33.62■■■□□ 2.97
RAD23B-203ENST00000419616 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
RAD23B-203ENST00000419616 TARBP1Q13395 1621 aaKnown RBP33.5■■■□□ 2.95
RAD23B-203ENST00000419616 CUX1P39880 1505 aa33.48■■■□□ 2.95
RAD23B-203ENST00000419616 EIF4G3O43432 1585 aaKnown RBP33.48■■■□□ 2.95
RAD23B-203ENST00000419616 OSCARQ8IYS5 282 aa33.48■■■□□ 2.95
RAD23B-203ENST00000419616 SOGA1O94964 1423 aa33.47■■■□□ 2.95
RAD23B-203ENST00000419616 FGD5Q6ZNL6 1462 aa33.45■■■□□ 2.95
RAD23B-203ENST00000419616 RAD54L2Q9Y4B4 1467 aa33.45■■■□□ 2.95
RAD23B-203ENST00000419616 AQRO60306 1485 aaKnown RBP eCLIP33.43■■■□□ 2.942e-14■■□□□ 11.6
RAD23B-203ENST00000419616 TDRD9Q8NDG6 1382 aaKnown RBP33.33■■■□□ 2.93
RAD23B-203ENST00000419616 TRIM41Q8WV44 630 aa33.26■■■□□ 2.91
RAD23B-203ENST00000419616 FBLN2P98095 1184 aa33.23■■■□□ 2.91
RAD23B-203ENST00000419616 WDR97A6NE52 1622 aa33.22■■■□□ 2.91
RAD23B-203ENST00000419616 WRNQ14191 1432 aaPredicted RBP eCLIP33.19■■■□□ 2.9
RAD23B-203ENST00000419616 CHD1O14646 1710 aa33.14■■■□□ 2.9
RAD23B-203ENST00000419616 TOP2BQ02880 1626 aa33.12■■■□□ 2.89
RAD23B-203ENST00000419616 BIVM-ERCC5R4GMW8 1640 aa33.11■■■□□ 2.89
RAD23B-203ENST00000419616 GRIN2BQ13224 1484 aa33.1■■■□□ 2.89
RAD23B-203ENST00000419616 SNAPC4Q5SXM2 1469 aa33.1■■■□□ 2.89
RAD23B-203ENST00000419616 SYNJ1O43426 1573 aa33.09■■■□□ 2.89
RAD23B-203ENST00000419616 ABCA10Q8WWZ4 1543 aa33.07■■■□□ 2.89
RAD23B-203ENST00000419616 GAPVD1Q14C86 1478 aa33.07■■■□□ 2.88
RAD23B-203ENST00000419616 CHMP7Q8WUX9 453 aaPredicted RBP33.04■■■□□ 2.88
RAD23B-203ENST00000419616 MAGI1Q96QZ7 1491 aaPredicted RBP33.02■■■□□ 2.88
RAD23B-203ENST00000419616 PBRM1Q86U86 1689 aa33.01■■■□□ 2.88
RAD23B-203ENST00000419616 ABCA5Q8WWZ7 1642 aa32.96■■■□□ 2.87
RAD23B-203ENST00000419616 SYNJ2O15056 1496 aa32.91■■■□□ 2.86
RAD23B-203ENST00000419616 RIMBP3CA6NJZ7 1639 aa32.91■■■□□ 2.86
RAD23B-203ENST00000419616 RIMBP3BA6NNM3 1639 aa32.91■■■□□ 2.86
RAD23B-203ENST00000419616 RIMBP3Q9UFD9 1639 aa32.91■■■□□ 2.86
RAD23B-203ENST00000419616 ARHGEF11O15085 1522 aa32.86■■■□□ 2.85
RAD23B-203ENST00000419616 CLASP1Q7Z460 1538 aa32.71■■■□□ 2.83
RAD23B-203ENST00000419616 ADAMTS12P58397 1594 aa32.7■■■□□ 2.82
RAD23B-203ENST00000419616 ERICH3Q5RHP9 1530 aa32.69■■■□□ 2.82
RAD23B-203ENST00000419616 CYB5RLQ6IPT4 315 aa32.68■■■□□ 2.82
RAD23B-203ENST00000419616 FHAD1B1AJZ9 1412 aa32.66■■■□□ 2.82
RAD23B-203ENST00000419616 GRIN2AQ12879 1464 aa32.66■■■□□ 2.82
RAD23B-203ENST00000419616 KIF27Q86VH2 1401 aa32.55■■■□□ 2.8
RAD23B-203ENST00000419616 ARAP1Q96P48 1450 aa32.54■■■□□ 2.8
RAD23B-203ENST00000419616 CEP170Q5SW79 1584 aa32.49■■■□□ 2.79
RAD23B-203ENST00000419616 NUP160Q12769 1436 aa32.48■■■□□ 2.79
RAD23B-203ENST00000419616 IGF1RP08069 1367 aa32.41■■■□□ 2.78
RAD23B-203ENST00000419616 CUL7Q14999 1698 aa32.36■■■□□ 2.77
RAD23B-203ENST00000419616 SHROOM2Q13796 1616 aa32.26■■■□□ 2.76
RAD23B-203ENST00000419616 CARMIL1Q5VZK9 1371 aa32.26■■■□□ 2.75
RAD23B-203ENST00000419616 ERCC6L2Q5T890 1561 aa32.26■■■□□ 2.75
RAD23B-203ENST00000419616 JPH4Q96JJ6 628 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms