RNA–Protein interactions for RNA: ENST00000559300.5

SEMA4B-210, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-210ENST00000559300 NISCHQ9Y2I1 1504 aa43.93■■■■■ 4.62
SEMA4B-210ENST00000559300 CCDC180Q9P1Z9 1646 aa38.94■■■■□ 3.82
SEMA4B-210ENST00000559300 ABCC9O60706 1549 aa38.03■■■■□ 3.68
SEMA4B-210ENST00000559300 NACADO15069 1562 aa36.66■■■■□ 3.46
SEMA4B-210ENST00000559300 RB1CC1Q8TDY2 1594 aa36.64■■■■□ 3.46
SEMA4B-210ENST00000559300 DCAF8L2P0C7V8 631 aa36.61■■■■□ 3.45
SEMA4B-210ENST00000559300 ZCCHC6Q5VYS8 1495 aaKnown RBP36.61■■■■□ 3.45
SEMA4B-210ENST00000559300 MYO15BQ96JP2 1530 aa36.55■■■■□ 3.44
SEMA4B-210ENST00000559300 DCAF1Q9Y4B6 1507 aa36.4■■■■□ 3.42
SEMA4B-210ENST00000559300 UNC13AQ9UPW8 1703 aa35.66■■■■□ 3.3
SEMA4B-210ENST00000559300 PABPN1Q86U42 306 aaKnown RBP eCLIP35.59■■■■□ 3.29
SEMA4B-210ENST00000559300 BICRAQ9NZM4 1560 aa35.53■■■■□ 3.28
SEMA4B-210ENST00000559300 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
SEMA4B-210ENST00000559300 SHROOM4Q9ULL8 1493 aa35.27■■■■□ 3.24
SEMA4B-210ENST00000559300 DNAJC5BQ9UF47 199 aa34.9■■■■□ 3.18
SEMA4B-210ENST00000559300 EIF4G1Q04637 1599 aaKnown RBP34.59■■■■□ 3.13
SEMA4B-210ENST00000559300 CC2D2AQ9P2K1 1620 aa34.39■■■■□ 3.1
SEMA4B-210ENST00000559300 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.07
SEMA4B-210ENST00000559300 BAZ1AQ9NRL2 1556 aaPredicted RBP34.02■■■■□ 3.04
SEMA4B-210ENST00000559300 SMARCA4P51532 1647 aa34.01■■■■□ 3.04
SEMA4B-210ENST00000559300 NCAPD3P42695 1498 aa33.88■■■■□ 3.01
SEMA4B-210ENST00000559300 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
SEMA4B-210ENST00000559300 MROH2BQ7Z745 1585 aa33.83■■■■□ 3.01
SEMA4B-210ENST00000559300 SMARCA2P51531 1590 aa33.81■■■■□ 3
SEMA4B-210ENST00000559300 PEG3Q9GZU2 1588 aa33.74■■■□□ 2.99
SEMA4B-210ENST00000559300 HMGXB3Q12766 1538 aa33.67■■■□□ 2.98
SEMA4B-210ENST00000559300 BAZ1BQ9UIG0 1483 aaKnown RBP33.56■■■□□ 2.96
SEMA4B-210ENST00000559300 RSF1Q96T23 1441 aaPredicted RBP33.53■■■□□ 2.96
SEMA4B-210ENST00000559300 WIZO95785 1651 aa33.39■■■□□ 2.94
SEMA4B-210ENST00000559300 TOP2AP11388 1531 aaKnown RBP33.12■■■□□ 2.89
SEMA4B-210ENST00000559300 NESP48681 1621 aa32.94■■■□□ 2.86
SEMA4B-210ENST00000559300 LAMC3Q9Y6N6 1575 aa32.9■■■□□ 2.86
SEMA4B-210ENST00000559300 CADPSQ9ULU8 1353 aa32.89■■■□□ 2.86
SEMA4B-210ENST00000559300 ERCC6Q03468 1493 aa32.78■■■□□ 2.84
SEMA4B-210ENST00000559300 CCDC88BA6NC98 1476 aa32.75■■■□□ 2.83
SEMA4B-210ENST00000559300 PDS5BQ9NTI5 1447 aa32.72■■■□□ 2.83
SEMA4B-210ENST00000559300 CFTRP13569 1480 aa32.71■■■□□ 2.83
SEMA4B-210ENST00000559300 SUPT5HO00267 1087 aaKnown RBP32.67■■■□□ 2.82
SEMA4B-210ENST00000559300 CUX2O14529 1486 aa32.46■■■□□ 2.79
SEMA4B-210ENST00000559300 FANCD2Q9BXW9 1451 aa32.46■■■□□ 2.79
SEMA4B-210ENST00000559300 KIF21AQ7Z4S6 1674 aa32.45■■■□□ 2.79
SEMA4B-210ENST00000559300 CEP164Q9UPV0 1460 aa32.4■■■□□ 2.78
SEMA4B-210ENST00000559300 THOC2Q8NI27 1593 aaKnown RBP32.4■■■□□ 2.78
SEMA4B-210ENST00000559300 MRC2Q9UBG0 1479 aa32.35■■■□□ 2.77
SEMA4B-210ENST00000559300 PRDM2Q13029 1718 aa32.25■■■□□ 2.75
SEMA4B-210ENST00000559300 WDR62O43379 1518 aa32.24■■■□□ 2.75
SEMA4B-210ENST00000559300 URB2Q14146 1524 aaKnown RBP32.12■■■□□ 2.73
SEMA4B-210ENST00000559300 ABCC8Q09428 1581 aa32■■■□□ 2.71
SEMA4B-210ENST00000559300 TOPBP1Q92547 1522 aa31.95■■■□□ 2.7
SEMA4B-210ENST00000559300 DNMBPQ6XZF7 1577 aa31.9■■■□□ 2.7
SEMA4B-210ENST00000559300 IFT140Q96RY7 1462 aa31.76■■■□□ 2.67
SEMA4B-210ENST00000559300 CUX1P39880 1505 aa31.73■■■□□ 2.67
SEMA4B-210ENST00000559300 POLA1P09884 1462 aaPredicted RBP31.69■■■□□ 2.66
SEMA4B-210ENST00000559300 FGD5Q6ZNL6 1462 aa31.6■■■□□ 2.65
SEMA4B-210ENST00000559300 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.65
SEMA4B-210ENST00000559300 SOGA1O94964 1423 aa31.58■■■□□ 2.65
SEMA4B-210ENST00000559300 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.64
SEMA4B-210ENST00000559300 ZNF608Q9ULD9 1512 aaPredicted RBP31.56■■■□□ 2.64
SEMA4B-210ENST00000559300 RAD54L2Q9Y4B4 1467 aa31.53■■■□□ 2.64
SEMA4B-210ENST00000559300 TOP2BQ02880 1626 aa31.47■■■□□ 2.63
SEMA4B-210ENST00000559300 SYNJ1O43426 1573 aa31.44■■■□□ 2.62
SEMA4B-210ENST00000559300 BIVM-ERCC5R4GMW8 1640 aa31.43■■■□□ 2.62
SEMA4B-210ENST00000559300 AQRO60306 1485 aaKnown RBP eCLIP31.41■■■□□ 2.621e-7■■■■□ 22
SEMA4B-210ENST00000559300 DNAJC5Q9H3Z4 198 aa31.4■■■□□ 2.62
SEMA4B-210ENST00000559300 EIF4G3O43432 1585 aaKnown RBP31.39■■■□□ 2.61
SEMA4B-210ENST00000559300 TDRD9Q8NDG6 1382 aaKnown RBP31.38■■■□□ 2.61
SEMA4B-210ENST00000559300 WDR97A6NE52 1622 aa31.36■■■□□ 2.61
SEMA4B-210ENST00000559300 ABCA10Q8WWZ4 1543 aa31.34■■■□□ 2.61
SEMA4B-210ENST00000559300 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
SEMA4B-210ENST00000559300 GRIN2BQ13224 1484 aa31.2■■■□□ 2.58
SEMA4B-210ENST00000559300 OSCARQ8IYS5 282 aa31.16■■■□□ 2.58
SEMA4B-210ENST00000559300 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
SEMA4B-210ENST00000559300 MAGI1Q96QZ7 1491 aaPredicted RBP31.11■■■□□ 2.57
SEMA4B-210ENST00000559300 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
SEMA4B-210ENST00000559300 FBLN2P98095 1184 aa31■■■□□ 2.55
SEMA4B-210ENST00000559300 PBRM1Q86U86 1689 aa30.98■■■□□ 2.55
SEMA4B-210ENST00000559300 SYNJ2O15056 1496 aa30.98■■■□□ 2.55
SEMA4B-210ENST00000559300 CHMP7Q8WUX9 453 aaPredicted RBP30.97■■■□□ 2.55
SEMA4B-210ENST00000559300 ERICH3Q5RHP9 1530 aa30.96■■■□□ 2.55
SEMA4B-210ENST00000559300 KIF27Q86VH2 1401 aa30.94■■■□□ 2.54
SEMA4B-210ENST00000559300 TRIM41Q8WV44 630 aa30.91■■■□□ 2.54
SEMA4B-210ENST00000559300 CHD1O14646 1710 aa30.9■■■□□ 2.54
SEMA4B-210ENST00000559300 FHAD1B1AJZ9 1412 aa30.88■■■□□ 2.53
SEMA4B-210ENST00000559300 ADAMTS12P58397 1594 aa30.84■■■□□ 2.53
SEMA4B-210ENST00000559300 IGF1RP08069 1367 aa30.83■■■□□ 2.53
SEMA4B-210ENST00000559300 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
SEMA4B-210ENST00000559300 CLASP1Q7Z460 1538 aa30.7■■■□□ 2.51
SEMA4B-210ENST00000559300 NUP160Q12769 1436 aa30.68■■■□□ 2.5
SEMA4B-210ENST00000559300 CUL7Q14999 1698 aa30.63■■■□□ 2.49
SEMA4B-210ENST00000559300 RUSC2Q8N2Y8 1516 aa30.63■■■□□ 2.49
SEMA4B-210ENST00000559300 CARMIL1Q5VZK9 1371 aa30.62■■■□□ 2.49
SEMA4B-210ENST00000559300 CHIC1Q5VXU3 224 aa30.61■■■□□ 2.49
SEMA4B-210ENST00000559300 ARHGEF11O15085 1522 aa30.58■■■□□ 2.49
SEMA4B-210ENST00000559300 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
SEMA4B-210ENST00000559300 RIMBP3CA6NJZ7 1639 aa30.52■■■□□ 2.48
SEMA4B-210ENST00000559300 RIMBP3BA6NNM3 1639 aa30.52■■■□□ 2.48
SEMA4B-210ENST00000559300 RIMBP3Q9UFD9 1639 aa30.52■■■□□ 2.48
SEMA4B-210ENST00000559300 RAPGEF2Q9Y4G8 1499 aa30.44■■■□□ 2.46
SEMA4B-210ENST00000559300 EEA1Q15075 1411 aa30.42■■■□□ 2.46
SEMA4B-210ENST00000559300 KIAA0586Q9BVV6 1533 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms