RNA–Protein interactions for RNA: ENST00000376581.9

FARP1-202, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2 BASIC

Gene FARP1, Length 1,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-202ENST00000376581 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
FARP1-202ENST00000376581 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
FARP1-202ENST00000376581 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
FARP1-202ENST00000376581 PHF23Q9BUL5 403 aaPredicted RBP21.19■□□□□ 0.98
FARP1-202ENST00000376581 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
FARP1-202ENST00000376581 ABCC9O60706 1549 aa19.67■□□□□ 0.74
FARP1-202ENST00000376581 FOXD1Q16676 465 aa19.6■□□□□ 0.73
FARP1-202ENST00000376581 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
FARP1-202ENST00000376581 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
FARP1-202ENST00000376581 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
FARP1-202ENST00000376581 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
FARP1-202ENST00000376581 ADRA2BP18089 450 aa18.69■□□□□ 0.58
FARP1-202ENST00000376581 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
FARP1-202ENST00000376581 PIAS4Q8N2W9 510 aaPredicted RBP18.37■□□□□ 0.53
FARP1-202ENST00000376581 NACADO15069 1562 aa18.35■□□□□ 0.53
FARP1-202ENST00000376581 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
FARP1-202ENST00000376581 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
FARP1-202ENST00000376581 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
FARP1-202ENST00000376581 MSH5O43196 834 aa18.05■□□□□ 0.48
FARP1-202ENST00000376581 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
FARP1-202ENST00000376581 MYO15BQ96JP2 1530 aa17.91■□□□□ 0.46
FARP1-202ENST00000376581 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
FARP1-202ENST00000376581 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.44
FARP1-202ENST00000376581 SHROOM4Q9ULL8 1493 aa17.73■□□□□ 0.43
FARP1-202ENST00000376581 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
FARP1-202ENST00000376581 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
FARP1-202ENST00000376581 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.4
FARP1-202ENST00000376581 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
FARP1-202ENST00000376581 ZCCHC6Q5VYS8 1495 aaKnown RBP17.47■□□□□ 0.39
FARP1-202ENST00000376581 CUX2O14529 1486 aa17.15■□□□□ 0.34
FARP1-202ENST00000376581 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
FARP1-202ENST00000376581 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
FARP1-202ENST00000376581 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
FARP1-202ENST00000376581 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
FARP1-202ENST00000376581 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
FARP1-202ENST00000376581 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
FARP1-202ENST00000376581 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
FARP1-202ENST00000376581 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
FARP1-202ENST00000376581 SMARCA2P51531 1590 aa16.77■□□□□ 0.27
FARP1-202ENST00000376581 NESP48681 1621 aa16.75■□□□□ 0.27
FARP1-202ENST00000376581 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
FARP1-202ENST00000376581 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
FARP1-202ENST00000376581 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
FARP1-202ENST00000376581 THOC2Q8NI27 1593 aaKnown RBP16.66■□□□□ 0.26
FARP1-202ENST00000376581 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
FARP1-202ENST00000376581 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
FARP1-202ENST00000376581 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
FARP1-202ENST00000376581 KIF21AQ7Z4S6 1674 aa16.59■□□□□ 0.25
FARP1-202ENST00000376581 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
FARP1-202ENST00000376581 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
FARP1-202ENST00000376581 KCNA4P22459 653 aa16.51■□□□□ 0.23
FARP1-202ENST00000376581 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
FARP1-202ENST00000376581 PEG3Q9GZU2 1588 aa16.49■□□□□ 0.23
FARP1-202ENST00000376581 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
FARP1-202ENST00000376581 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
FARP1-202ENST00000376581 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
FARP1-202ENST00000376581 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
FARP1-202ENST00000376581 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
FARP1-202ENST00000376581 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
FARP1-202ENST00000376581 WDR62O43379 1518 aa16.35■□□□□ 0.21
FARP1-202ENST00000376581 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
FARP1-202ENST00000376581 CEP164Q9UPV0 1460 aa16.27■□□□□ 0.19
FARP1-202ENST00000376581 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
FARP1-202ENST00000376581 WIZO95785 1651 aa16.18■□□□□ 0.18
FARP1-202ENST00000376581 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
FARP1-202ENST00000376581 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
FARP1-202ENST00000376581 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
FARP1-202ENST00000376581 CFTRP13569 1480 aa16.09■□□□□ 0.17
FARP1-202ENST00000376581 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
FARP1-202ENST00000376581 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
FARP1-202ENST00000376581 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.16
FARP1-202ENST00000376581 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
FARP1-202ENST00000376581 PRDM2Q13029 1718 aa16.01■□□□□ 0.15
FARP1-202ENST00000376581 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
FARP1-202ENST00000376581 IFT140Q96RY7 1462 aa15.96■□□□□ 0.14
FARP1-202ENST00000376581 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
FARP1-202ENST00000376581 TOP2AP11388 1531 aaKnown RBP15.91■□□□□ 0.14
FARP1-202ENST00000376581 CHD1O14646 1710 aa15.87■□□□□ 0.13
FARP1-202ENST00000376581 FBLN2P98095 1184 aa15.86■□□□□ 0.13
FARP1-202ENST00000376581 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
FARP1-202ENST00000376581 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
FARP1-202ENST00000376581 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
FARP1-202ENST00000376581 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
FARP1-202ENST00000376581 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
FARP1-202ENST00000376581 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.113e-6■■□□□ 13.8
FARP1-202ENST00000376581 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
FARP1-202ENST00000376581 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
FARP1-202ENST00000376581 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
FARP1-202ENST00000376581 CHMP7Q8WUX9 453 aaPredicted RBP15.66■□□□□ 0.1
FARP1-202ENST00000376581 POLA1P09884 1462 aaPredicted RBP15.63■□□□□ 0.09
FARP1-202ENST00000376581 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
FARP1-202ENST00000376581 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
FARP1-202ENST00000376581 SOGA1O94964 1423 aa15.61■□□□□ 0.09
FARP1-202ENST00000376581 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
FARP1-202ENST00000376581 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
FARP1-202ENST00000376581 CLASP1Q7Z460 1538 aa15.58■□□□□ 0.09
FARP1-202ENST00000376581 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
FARP1-202ENST00000376581 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
FARP1-202ENST00000376581 MAGI1Q96QZ7 1491 aaPredicted RBP15.55■□□□□ 0.08
FARP1-202ENST00000376581 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms