RNA–Protein interactions for RNA: ENST00000393412.7

MDM2-209, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-209ENST00000393412 NISCHQ9Y2I1 1504 aa39.62■■■■□ 3.93
MDM2-209ENST00000393412 CCDC180Q9P1Z9 1646 aa35.49■■■■□ 3.27
MDM2-209ENST00000393412 ABCC9O60706 1549 aa35.49■■■■□ 3.27
MDM2-209ENST00000393412 RB1CC1Q8TDY2 1594 aa33.81■■■■□ 3
MDM2-209ENST00000393412 DCAF8L2P0C7V8 631 aa33.62■■■□□ 2.97
MDM2-209ENST00000393412 NACADO15069 1562 aa33.58■■■□□ 2.97
MDM2-209ENST00000393412 DNAJC5BQ9UF47 199 aa33.16■■■□□ 2.9
MDM2-209ENST00000393412 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
MDM2-209ENST00000393412 PABPN1Q86U42 306 aaKnown RBP eCLIP33.1■■■□□ 2.89
MDM2-209ENST00000393412 UNC13AQ9UPW8 1703 aa32.93■■■□□ 2.86
MDM2-209ENST00000393412 ZCCHC6Q5VYS8 1495 aaKnown RBP32.83■■■□□ 2.85
MDM2-209ENST00000393412 BICRAQ9NZM4 1560 aa32.72■■■□□ 2.83
MDM2-209ENST00000393412 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
MDM2-209ENST00000393412 SCRIBQ14160 1630 aa32.39■■■□□ 2.78
MDM2-209ENST00000393412 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
MDM2-209ENST00000393412 CC2D2AQ9P2K1 1620 aa32.02■■■□□ 2.72
MDM2-209ENST00000393412 EIF4G1Q04637 1599 aaKnown RBP31.97■■■□□ 2.71
MDM2-209ENST00000393412 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
MDM2-209ENST00000393412 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
MDM2-209ENST00000393412 ATAD2BQ9ULI0 1458 aa30.91■■■□□ 2.54
MDM2-209ENST00000393412 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
MDM2-209ENST00000393412 SMARCA2P51531 1590 aa30.86■■■□□ 2.53
MDM2-209ENST00000393412 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
MDM2-209ENST00000393412 HMGXB3Q12766 1538 aa30.75■■■□□ 2.51
MDM2-209ENST00000393412 ERCC6Q03468 1493 aa30.7■■■□□ 2.51
MDM2-209ENST00000393412 BAZ1BQ9UIG0 1483 aaKnown RBP30.67■■■□□ 2.5
MDM2-209ENST00000393412 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
MDM2-209ENST00000393412 CUX2O14529 1486 aa30.54■■■□□ 2.48
MDM2-209ENST00000393412 MROH2BQ7Z745 1585 aa30.52■■■□□ 2.48
MDM2-209ENST00000393412 NESP48681 1621 aa30.47■■■□□ 2.47
MDM2-209ENST00000393412 DNAJC5Q9H3Z4 198 aa30.46■■■□□ 2.47
MDM2-209ENST00000393412 LAMC3Q9Y6N6 1575 aa30.29■■■□□ 2.44
MDM2-209ENST00000393412 PDS5BQ9NTI5 1447 aa30.17■■■□□ 2.42
MDM2-209ENST00000393412 WIZO95785 1651 aa30.16■■■□□ 2.42
MDM2-209ENST00000393412 THOC2Q8NI27 1593 aaKnown RBP30.1■■■□□ 2.41
MDM2-209ENST00000393412 CADPSQ9ULU8 1353 aa30.09■■■□□ 2.41
MDM2-209ENST00000393412 KIF21AQ7Z4S6 1674 aa30.06■■■□□ 2.4
MDM2-209ENST00000393412 RSF1Q96T23 1441 aaPredicted RBP29.94■■■□□ 2.38
MDM2-209ENST00000393412 MRC2Q9UBG0 1479 aa29.86■■■□□ 2.37
MDM2-209ENST00000393412 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
MDM2-209ENST00000393412 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
MDM2-209ENST00000393412 FANCD2Q9BXW9 1451 aa29.75■■■□□ 2.35
MDM2-209ENST00000393412 WDR62O43379 1518 aa29.74■■■□□ 2.35
MDM2-209ENST00000393412 CFTRP13569 1480 aa29.73■■■□□ 2.35
MDM2-209ENST00000393412 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
MDM2-209ENST00000393412 URB2Q14146 1524 aaKnown RBP29.44■■■□□ 2.3
MDM2-209ENST00000393412 PRDM2Q13029 1718 aa29.39■■■□□ 2.3
MDM2-209ENST00000393412 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
MDM2-209ENST00000393412 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
MDM2-209ENST00000393412 TRIM41Q8WV44 630 aa29.24■■■□□ 2.27
MDM2-209ENST00000393412 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
MDM2-209ENST00000393412 ABCC8Q09428 1581 aa29.17■■■□□ 2.26
MDM2-209ENST00000393412 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
MDM2-209ENST00000393412 ZNF608Q9ULD9 1512 aaPredicted RBP29.08■■■□□ 2.25
MDM2-209ENST00000393412 DNMBPQ6XZF7 1577 aa29.07■■■□□ 2.24
MDM2-209ENST00000393412 EIF4G3O43432 1585 aaKnown RBP28.91■■■□□ 2.22
MDM2-209ENST00000393412 AQRO60306 1485 aaKnown RBP eCLIP28.87■■■□□ 2.219e-7■■■■□ 20
MDM2-209ENST00000393412 POLA1P09884 1462 aaPredicted RBP28.87■■■□□ 2.21
MDM2-209ENST00000393412 TARBP1Q13395 1621 aaKnown RBP28.85■■■□□ 2.21
MDM2-209ENST00000393412 SUPT5HO00267 1087 aaKnown RBP28.82■■■□□ 2.2
MDM2-209ENST00000393412 SOGA1O94964 1423 aa28.8■■■□□ 2.2
MDM2-209ENST00000393412 FBLN2P98095 1184 aa28.78■■■□□ 2.2
MDM2-209ENST00000393412 RAD54L2Q9Y4B4 1467 aa28.78■■■□□ 2.2
MDM2-209ENST00000393412 RIMBP3CA6NJZ7 1639 aa28.74■■■□□ 2.19
MDM2-209ENST00000393412 RIMBP3BA6NNM3 1639 aa28.74■■■□□ 2.19
MDM2-209ENST00000393412 RIMBP3Q9UFD9 1639 aa28.74■■■□□ 2.19
MDM2-209ENST00000393412 TDRD9Q8NDG6 1382 aaKnown RBP28.73■■■□□ 2.19
MDM2-209ENST00000393412 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
MDM2-209ENST00000393412 ARHGEF11O15085 1522 aa28.68■■■□□ 2.18
MDM2-209ENST00000393412 CHD1O14646 1710 aa28.68■■■□□ 2.18
MDM2-209ENST00000393412 CUX1P39880 1505 aa28.67■■■□□ 2.18
MDM2-209ENST00000393412 WDR97A6NE52 1622 aa28.6■■■□□ 2.17
MDM2-209ENST00000393412 SNAPC4Q5SXM2 1469 aa28.57■■■□□ 2.16
MDM2-209ENST00000393412 CYB5RLQ6IPT4 315 aa28.57■■■□□ 2.16
MDM2-209ENST00000393412 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
MDM2-209ENST00000393412 GRIN2BQ13224 1484 aa28.52■■■□□ 2.16
MDM2-209ENST00000393412 MAGI1Q96QZ7 1491 aaPredicted RBP28.51■■■□□ 2.15
MDM2-209ENST00000393412 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
MDM2-209ENST00000393412 SYNJ2O15056 1496 aa28.41■■■□□ 2.14
MDM2-209ENST00000393412 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
MDM2-209ENST00000393412 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
MDM2-209ENST00000393412 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
MDM2-209ENST00000393412 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
MDM2-209ENST00000393412 PBRM1Q86U86 1689 aa28.35■■■□□ 2.13
MDM2-209ENST00000393412 CLASP1Q7Z460 1538 aa28.34■■■□□ 2.13
MDM2-209ENST00000393412 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
MDM2-209ENST00000393412 TRHP20396 242 aaPredicted RBP28.28■■■□□ 2.12
MDM2-209ENST00000393412 TOP2BQ02880 1626 aa28.24■■■□□ 2.11
MDM2-209ENST00000393412 BIVM-ERCC5R4GMW8 1640 aa28.22■■■□□ 2.11
MDM2-209ENST00000393412 GRIN2AQ12879 1464 aa28.14■■■□□ 2.09
MDM2-209ENST00000393412 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
MDM2-209ENST00000393412 FHAD1B1AJZ9 1412 aa28.08■■■□□ 2.09
MDM2-209ENST00000393412 ERICH3Q5RHP9 1530 aa28.04■■■□□ 2.08
MDM2-209ENST00000393412 NUP160Q12769 1436 aa28.01■■■□□ 2.07
MDM2-209ENST00000393412 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
MDM2-209ENST00000393412 ERCC6L2Q5T890 1561 aa27.9■■■□□ 2.06
MDM2-209ENST00000393412 SHROOM2Q13796 1616 aa27.84■■■□□ 2.05
MDM2-209ENST00000393412 JPH4Q96JJ6 628 aa27.82■■■□□ 2.04
MDM2-209ENST00000393412 PRG4Q92954 1404 aaPredicted RBP27.8■■■□□ 2.04
MDM2-209ENST00000393412 KIF27Q86VH2 1401 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms