RNA–Protein interactions for RNA: ENST00000485904.5

AGAP3-219, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-219ENST00000485904 NISCHQ9Y2I1 1504 aa48.4■■■■■ 5.34
AGAP3-219ENST00000485904 CCDC180Q9P1Z9 1646 aa43.07■■■■■ 4.48
AGAP3-219ENST00000485904 ABCC9O60706 1549 aa41.88■■■■■ 4.29
AGAP3-219ENST00000485904 DCAF8L2P0C7V8 631 aa40.43■■■■■ 4.06
AGAP3-219ENST00000485904 RB1CC1Q8TDY2 1594 aa40.42■■■■■ 4.06
AGAP3-219ENST00000485904 NACADO15069 1562 aa40.38■■■■■ 4.05
AGAP3-219ENST00000485904 ZCCHC6Q5VYS8 1495 aaKnown RBP40.37■■■■■ 4.05
AGAP3-219ENST00000485904 MYO15BQ96JP2 1530 aa40.11■■■■■ 4.01
AGAP3-219ENST00000485904 DCAF1Q9Y4B6 1507 aa40.04■■■■■ 4
AGAP3-219ENST00000485904 UNC13AQ9UPW8 1703 aa39.57■■■■□ 3.92
AGAP3-219ENST00000485904 SCRIBQ14160 1630 aa39.32■■■■□ 3.88
AGAP3-219ENST00000485904 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.85
AGAP3-219ENST00000485904 BICRAQ9NZM4 1560 aa39.09■■■■□ 3.85
AGAP3-219ENST00000485904 SHROOM4Q9ULL8 1493 aa38.73■■■■□ 3.79
AGAP3-219ENST00000485904 EIF4G1Q04637 1599 aaKnown RBP38.09■■■■□ 3.69
AGAP3-219ENST00000485904 DNAJC5BQ9UF47 199 aa38.08■■■■□ 3.69
AGAP3-219ENST00000485904 CC2D2AQ9P2K1 1620 aa37.91■■■■□ 3.66
AGAP3-219ENST00000485904 CECR2Q9BXF3 1484 aa37.65■■■■□ 3.62
AGAP3-219ENST00000485904 SMARCA4P51532 1647 aa37.58■■■■□ 3.61
AGAP3-219ENST00000485904 BAZ1AQ9NRL2 1556 aaPredicted RBP37.55■■■■□ 3.6
AGAP3-219ENST00000485904 SMARCA2P51531 1590 aa37.3■■■■□ 3.56
AGAP3-219ENST00000485904 MROH2BQ7Z745 1585 aa37.3■■■■□ 3.56
AGAP3-219ENST00000485904 ATAD2BQ9ULI0 1458 aa37.25■■■■□ 3.55
AGAP3-219ENST00000485904 NCAPD3P42695 1498 aa37.16■■■■□ 3.54
AGAP3-219ENST00000485904 PEG3Q9GZU2 1588 aa37.14■■■■□ 3.54
AGAP3-219ENST00000485904 HMGXB3Q12766 1538 aa37.09■■■■□ 3.53
AGAP3-219ENST00000485904 BAZ1BQ9UIG0 1483 aaKnown RBP37.03■■■■□ 3.52
AGAP3-219ENST00000485904 WIZO95785 1651 aa36.99■■■■□ 3.51
AGAP3-219ENST00000485904 RSF1Q96T23 1441 aaPredicted RBP36.91■■■■□ 3.5
AGAP3-219ENST00000485904 TOP2AP11388 1531 aaKnown RBP36.59■■■■□ 3.45
AGAP3-219ENST00000485904 LAMC3Q9Y6N6 1575 aa36.27■■■■□ 3.4
AGAP3-219ENST00000485904 NESP48681 1621 aa36.26■■■■□ 3.4
AGAP3-219ENST00000485904 SUPT5HO00267 1087 aaKnown RBP36.22■■■■□ 3.39
AGAP3-219ENST00000485904 ERCC6Q03468 1493 aa36.16■■■■□ 3.38
AGAP3-219ENST00000485904 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
AGAP3-219ENST00000485904 CCDC88BA6NC98 1476 aa36.1■■■■□ 3.37
AGAP3-219ENST00000485904 PDS5BQ9NTI5 1447 aa35.99■■■■□ 3.35
AGAP3-219ENST00000485904 KIF21AQ7Z4S6 1674 aa35.97■■■■□ 3.35
AGAP3-219ENST00000485904 CFTRP13569 1480 aa35.94■■■■□ 3.34
AGAP3-219ENST00000485904 PRDM2Q13029 1718 aa35.92■■■■□ 3.34
AGAP3-219ENST00000485904 FANCD2Q9BXW9 1451 aa35.76■■■■□ 3.32
AGAP3-219ENST00000485904 CEP164Q9UPV0 1460 aa35.74■■■■□ 3.31
AGAP3-219ENST00000485904 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
AGAP3-219ENST00000485904 CUX2O14529 1486 aa35.62■■■■□ 3.29
AGAP3-219ENST00000485904 MRC2Q9UBG0 1479 aa35.62■■■■□ 3.29
AGAP3-219ENST00000485904 WDR62O43379 1518 aa35.48■■■■□ 3.27
AGAP3-219ENST00000485904 URB2Q14146 1524 aaKnown RBP35.36■■■■□ 3.25
AGAP3-219ENST00000485904 ABCC8Q09428 1581 aa35.23■■■■□ 3.23
AGAP3-219ENST00000485904 DNMBPQ6XZF7 1577 aa35.22■■■■□ 3.23
AGAP3-219ENST00000485904 TOPBP1Q92547 1522 aa35.21■■■■□ 3.23
AGAP3-219ENST00000485904 CUX1P39880 1505 aa35.01■■■■□ 3.19
AGAP3-219ENST00000485904 IFT140Q96RY7 1462 aa34.94■■■■□ 3.18
AGAP3-219ENST00000485904 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
AGAP3-219ENST00000485904 FGD5Q6ZNL6 1462 aa34.88■■■■□ 3.17
AGAP3-219ENST00000485904 WRNQ14191 1432 aaPredicted RBP eCLIP34.87■■■■□ 3.176e-7■■■■■ 33.4
AGAP3-219ENST00000485904 BIVM-ERCC5R4GMW8 1640 aa34.82■■■■□ 3.16
AGAP3-219ENST00000485904 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
AGAP3-219ENST00000485904 TOP2BQ02880 1626 aa34.8■■■■□ 3.16
AGAP3-219ENST00000485904 SYNJ1O43426 1573 aa34.79■■■■□ 3.16
AGAP3-219ENST00000485904 SOGA1O94964 1423 aa34.77■■■■□ 3.16
AGAP3-219ENST00000485904 RAD54L2Q9Y4B4 1467 aa34.74■■■■□ 3.15
AGAP3-219ENST00000485904 ZNF608Q9ULD9 1512 aaPredicted RBP34.72■■■■□ 3.15
AGAP3-219ENST00000485904 EIF4G3O43432 1585 aaKnown RBP34.7■■■■□ 3.14
AGAP3-219ENST00000485904 WDR97A6NE52 1622 aa34.63■■■■□ 3.13
AGAP3-219ENST00000485904 AQRO60306 1485 aaKnown RBP eCLIP34.56■■■■□ 3.127e-8■■■□□ 17.2
AGAP3-219ENST00000485904 TDRD9Q8NDG6 1382 aaKnown RBP34.52■■■■□ 3.12
AGAP3-219ENST00000485904 ABCA10Q8WWZ4 1543 aa34.52■■■■□ 3.12
AGAP3-219ENST00000485904 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
AGAP3-219ENST00000485904 ABCA5Q8WWZ7 1642 aa34.41■■■■□ 3.1
AGAP3-219ENST00000485904 GAPVD1Q14C86 1478 aa34.39■■■■□ 3.1
AGAP3-219ENST00000485904 GRIN2BQ13224 1484 aa34.36■■■■□ 3.09
AGAP3-219ENST00000485904 SNAPC4Q5SXM2 1469 aa34.3■■■■□ 3.08
AGAP3-219ENST00000485904 CHD1O14646 1710 aa34.29■■■■□ 3.08
AGAP3-219ENST00000485904 MAGI1Q96QZ7 1491 aaPredicted RBP34.26■■■■□ 3.07
AGAP3-219ENST00000485904 DNAJC5Q9H3Z4 198 aa34.2■■■■□ 3.07
AGAP3-219ENST00000485904 FBLN2P98095 1184 aa34.19■■■■□ 3.06
AGAP3-219ENST00000485904 TRIM41Q8WV44 630 aa34.19■■■■□ 3.06
AGAP3-219ENST00000485904 OSCARQ8IYS5 282 aa34.15■■■■□ 3.06
AGAP3-219ENST00000485904 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
AGAP3-219ENST00000485904 KIF27Q86VH2 1401 aa34.14■■■■□ 3.06
AGAP3-219ENST00000485904 SYNJ2O15056 1496 aa34.11■■■■□ 3.05
AGAP3-219ENST00000485904 CHMP7Q8WUX9 453 aaPredicted RBP34.09■■■■□ 3.05
AGAP3-219ENST00000485904 ADAMTS12P58397 1594 aa34.09■■■■□ 3.05
AGAP3-219ENST00000485904 FHAD1B1AJZ9 1412 aa33.98■■■■□ 3.03
AGAP3-219ENST00000485904 CUL7Q14999 1698 aa33.96■■■■□ 3.03
AGAP3-219ENST00000485904 GRIN2AQ12879 1464 aa33.92■■■■□ 3.02
AGAP3-219ENST00000485904 IGF1RP08069 1367 aa33.86■■■■□ 3.01
AGAP3-219ENST00000485904 CHIC1Q5VXU3 224 aa33.83■■■■□ 3.01
AGAP3-219ENST00000485904 RUSC2Q8N2Y8 1516 aa33.82■■■■□ 3
AGAP3-219ENST00000485904 CLASP1Q7Z460 1538 aa33.79■■■■□ 3
AGAP3-219ENST00000485904 CEP170Q5SW79 1584 aa33.75■■■□□ 2.99
AGAP3-219ENST00000485904 CARMIL1Q5VZK9 1371 aa33.74■■■□□ 2.99
AGAP3-219ENST00000485904 NUP160Q12769 1436 aa33.7■■■□□ 2.99
AGAP3-219ENST00000485904 RIMBP3CA6NJZ7 1639 aa33.67■■■□□ 2.98
AGAP3-219ENST00000485904 RIMBP3BA6NNM3 1639 aa33.67■■■□□ 2.98
AGAP3-219ENST00000485904 RIMBP3Q9UFD9 1639 aa33.67■■■□□ 2.98
AGAP3-219ENST00000485904 ARHGEF11O15085 1522 aa33.63■■■□□ 2.97
AGAP3-219ENST00000485904 EEA1Q15075 1411 aa33.62■■■□□ 2.97
AGAP3-219ENST00000485904 RAPGEF2Q9Y4G8 1499 aa33.59■■■□□ 2.97
AGAP3-219ENST00000485904 FAM9AQ8IZU1 332 aaPredicted RBP33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms