RNA–Protein interactions for RNA: ENST00000357430.7

ACSL3-201, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSL3, Length 5,679 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-201ENST00000357430 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
ACSL3-201ENST00000357430 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
ACSL3-201ENST00000357430 SUPT5HO00267 1087 aaKnown RBP26.43■■□□□ 1.82
ACSL3-201ENST00000357430 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
ACSL3-201ENST00000357430 EHMT2Q96KQ7 1210 aa25.56■■□□□ 1.68
ACSL3-201ENST00000357430 APLP2Q06481 763 aa25.17■■□□□ 1.62
ACSL3-201ENST00000357430 FAM9AQ8IZU1 332 aaPredicted RBP25.02■■□□□ 1.6
ACSL3-201ENST00000357430 TTBK1Q5TCY1 1321 aaPredicted RBP24.62■■□□□ 1.53
ACSL3-201ENST00000357430 RANGAP1P46060 587 aaPredicted RBP24.6■■□□□ 1.53
ACSL3-201ENST00000357430 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
ACSL3-201ENST00000357430 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
ACSL3-201ENST00000357430 PELP1Q8IZL8 1130 aaKnown RBP24.38■■□□□ 1.49
ACSL3-201ENST00000357430 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
ACSL3-201ENST00000357430 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
ACSL3-201ENST00000357430 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
ACSL3-201ENST00000357430 ZEB1P37275 1124 aaPredicted RBP23.79■■□□□ 1.4
ACSL3-201ENST00000357430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.71■■□□□ 1.39
ACSL3-201ENST00000357430 HNRNPUL2Q1KMD3 747 aaKnown RBP23.71■■□□□ 1.39
ACSL3-201ENST00000357430 MYT1LQ9UL68 1186 aa23.67■■□□□ 1.38
ACSL3-201ENST00000357430 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
ACSL3-201ENST00000357430 CENPBP07199 599 aaPredicted RBP23.6■■□□□ 1.37
ACSL3-201ENST00000357430 ABCC9O60706 1549 aa23.47■■□□□ 1.35
ACSL3-201ENST00000357430 ITGAEP38570 1179 aa23.46■■□□□ 1.35
ACSL3-201ENST00000357430 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
ACSL3-201ENST00000357430 ERICH6Q7L0X2 663 aa23.3■■□□□ 1.32
ACSL3-201ENST00000357430 NEFLP07196 543 aa23.29■■□□□ 1.32
ACSL3-201ENST00000357430 TRIM26Q12899 539 aaPredicted RBP23.25■■□□□ 1.31
ACSL3-201ENST00000357430 CHIC1Q5VXU3 224 aa23.23■■□□□ 1.31
ACSL3-201ENST00000357430 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
ACSL3-201ENST00000357430 POLR3GLQ9BT43 218 aa23.21■■□□□ 1.31
ACSL3-201ENST00000357430 YTHDC1Q96MU7 727 aaKnown RBP23.21■■□□□ 1.31
ACSL3-201ENST00000357430 FBLN2P98095 1184 aa22.94■■□□□ 1.26
ACSL3-201ENST00000357430 CNGB1Q14028 1251 aaPredicted RBP22.94■■□□□ 1.26
ACSL3-201ENST00000357430 SLC4A1APQ9BWU0 796 aaKnown RBP22.89■■□□□ 1.26
ACSL3-201ENST00000357430 FAM50AQ14320 339 aaKnown RBP22.89■■□□□ 1.25
ACSL3-201ENST00000357430 TRIM52Q96A61 297 aa22.78■■□□□ 1.24
ACSL3-201ENST00000357430 HRCP23327 699 aa22.78■■□□□ 1.24
ACSL3-201ENST00000357430 DAXXQ9UER7 740 aaPredicted RBP22.6■■□□□ 1.21
ACSL3-201ENST00000357430 NEUROD1Q13562 356 aa22.54■■□□□ 1.2
ACSL3-201ENST00000357430 P3H3Q8IVL6 736 aa22.51■■□□□ 1.19
ACSL3-201ENST00000357430 ARID3CA6NKF2 412 aa22.5■■□□□ 1.19
ACSL3-201ENST00000357430 ZNF326Q5BKZ1 582 aaKnown RBP22.49■■□□□ 1.19
ACSL3-201ENST00000357430 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
ACSL3-201ENST00000357430 BCANQ96GW7 911 aa22.35■■□□□ 1.17
ACSL3-201ENST00000357430 CDK11AQ9UQ88 783 aaPredicted RBP22.35■■□□□ 1.17
ACSL3-201ENST00000357430 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
ACSL3-201ENST00000357430 ZNF777Q9ULD5 760 aaPredicted RBP22.34■■□□□ 1.17
ACSL3-201ENST00000357430 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.16
ACSL3-201ENST00000357430 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
ACSL3-201ENST00000357430 ESF1Q9H501 851 aaKnown RBP22.24■■□□□ 1.15
ACSL3-201ENST00000357430 NPM1P06748 294 aaKnown RBP eCLIP22.23■■□□□ 1.15
ACSL3-201ENST00000357430 ANP32CO43423 234 aa22.15■■□□□ 1.14
ACSL3-201ENST00000357430 SLC24A1O60721 1099 aa22.11■■□□□ 1.13
ACSL3-201ENST00000357430 NEFMP07197 916 aa22.08■■□□□ 1.13
ACSL3-201ENST00000357430 ZBTB47Q9UFB7 747 aaPredicted RBP22.04■■□□□ 1.12
ACSL3-201ENST00000357430 STAG3Q9UJ98 1225 aa22.04■■□□□ 1.12
ACSL3-201ENST00000357430 ZNF316A6NFI3 1004 aaPredicted RBP22.03■■□□□ 1.12
ACSL3-201ENST00000357430 CHGAP10645 457 aaKnown RBP22.03■■□□□ 1.12
ACSL3-201ENST00000357430 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
ACSL3-201ENST00000357430 ZCCHC6Q5VYS8 1495 aaKnown RBP22■■□□□ 1.11
ACSL3-201ENST00000357430 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
ACSL3-201ENST00000357430 CANXP27824 592 aaKnown RBP21.91■■□□□ 1.1
ACSL3-201ENST00000357430 BCL11AQ9H165 835 aa21.86■■□□□ 1.09
ACSL3-201ENST00000357430 RTL5Q5HYW3 569 aaPredicted RBP21.84■■□□□ 1.09
ACSL3-201ENST00000357430 MYT1Q01538 1121 aa21.84■■□□□ 1.09
ACSL3-201ENST00000357430 TSPY4P0CV99 314 aa21.82■■□□□ 1.08
ACSL3-201ENST00000357430 TSPY10P0CW01 314 aa21.82■■□□□ 1.08
ACSL3-201ENST00000357430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.82■■□□□ 1.08
ACSL3-201ENST00000357430 CHIC2Q9UKJ5 165 aa21.81■■□□□ 1.08
ACSL3-201ENST00000357430 TONSLQ96HA7 1378 aa21.8■■□□□ 1.08
ACSL3-201ENST00000357430 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
ACSL3-201ENST00000357430 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
ACSL3-201ENST00000357430 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
ACSL3-201ENST00000357430 KCNH8Q96L42 1107 aa21.64■■□□□ 1.06
ACSL3-201ENST00000357430 PLEKHD1A6NEE1 506 aa21.59■■□□□ 1.05
ACSL3-201ENST00000357430 GTF3C3Q9Y5Q9 886 aa21.58■■□□□ 1.05
ACSL3-201ENST00000357430 KDM2AQ9Y2K7 1162 aa21.58■■□□□ 1.04
ACSL3-201ENST00000357430 CLIP1P30622 1438 aa21.52■■□□□ 1.04
ACSL3-201ENST00000357430 DDX10Q13206 875 aaKnown RBP21.51■■□□□ 1.03
ACSL3-201ENST00000357430 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
ACSL3-201ENST00000357430 SCAF1Q9H7N4 1312 aaKnown RBP21.47■■□□□ 1.03
ACSL3-201ENST00000357430 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
ACSL3-201ENST00000357430 FAM9BQ8IZU0 186 aa21.46■■□□□ 1.03
ACSL3-201ENST00000357430 RRP7BPQ9NSQ0 103 aa21.46■■□□□ 1.03
ACSL3-201ENST00000357430 NACADO15069 1562 aa21.46■■□□□ 1.03
ACSL3-201ENST00000357430 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
ACSL3-201ENST00000357430 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
ACSL3-201ENST00000357430 TMC1Q8TDI8 760 aa21.44■■□□□ 1.02
ACSL3-201ENST00000357430 HNRNPUQ00839 825 aaKnown RBP eCLIP21.43■■□□□ 1.02
ACSL3-201ENST00000357430 ARID4BQ4LE39 1312 aaPredicted RBP21.41■■□□□ 1.02
ACSL3-201ENST00000357430 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
ACSL3-201ENST00000357430 ERCC6Q03468 1493 aa21.4■■□□□ 1.02
ACSL3-201ENST00000357430 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
ACSL3-201ENST00000357430 EEA1Q15075 1411 aa21.37■■□□□ 1.01
ACSL3-201ENST00000357430 C14orf37Q86TY3 774 aa21.37■■□□□ 1.01
ACSL3-201ENST00000357430 WDR43Q15061 677 aaKnown RBP eCLIP21.36■■□□□ 1.01
ACSL3-201ENST00000357430 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
ACSL3-201ENST00000357430 KIF27Q86VH2 1401 aa21.35■■□□□ 1.01
ACSL3-201ENST00000357430 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1.01
ACSL3-201ENST00000357430 A0A0G2JS52 829 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms