RNA–Protein interactions for RNA: ENST00000392066.7

ACSL3-202, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ACSL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-202ENST00000392066 NISCHQ9Y2I1 1504 aa32.44■■■□□ 2.78
ACSL3-202ENST00000392066 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
ACSL3-202ENST00000392066 ZCCHC6Q5VYS8 1495 aaKnown RBP27.26■■□□□ 1.95
ACSL3-202ENST00000392066 DCAF8L2P0C7V8 631 aa26.82■■□□□ 1.88
ACSL3-202ENST00000392066 ABCC9O60706 1549 aa26.79■■□□□ 1.88
ACSL3-202ENST00000392066 DCAF1Q9Y4B6 1507 aa26.73■■□□□ 1.87
ACSL3-202ENST00000392066 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
ACSL3-202ENST00000392066 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
ACSL3-202ENST00000392066 NACADO15069 1562 aa26.26■■□□□ 1.79
ACSL3-202ENST00000392066 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
ACSL3-202ENST00000392066 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
ACSL3-202ENST00000392066 UNC13AQ9UPW8 1703 aa25.69■■□□□ 1.7
ACSL3-202ENST00000392066 HRCP23327 699 aa25.57■■□□□ 1.68
ACSL3-202ENST00000392066 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
ACSL3-202ENST00000392066 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.65
ACSL3-202ENST00000392066 PPARGC1BQ86YN6 1023 aaKnown RBP25.32■■□□□ 1.64
ACSL3-202ENST00000392066 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
ACSL3-202ENST00000392066 PABPN1Q86U42 306 aaKnown RBP eCLIP25.29■■□□□ 1.64
ACSL3-202ENST00000392066 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
ACSL3-202ENST00000392066 PCGF6Q9BYE7 350 aa25.15■■□□□ 1.62
ACSL3-202ENST00000392066 MROH2BQ7Z745 1585 aa25.13■■□□□ 1.61
ACSL3-202ENST00000392066 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
ACSL3-202ENST00000392066 PELP1Q8IZL8 1130 aaKnown RBP24.95■■□□□ 1.59
ACSL3-202ENST00000392066 WIZO95785 1651 aa24.95■■□□□ 1.58
ACSL3-202ENST00000392066 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
ACSL3-202ENST00000392066 PEG3Q9GZU2 1588 aa24.6■■□□□ 1.53
ACSL3-202ENST00000392066 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
ACSL3-202ENST00000392066 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
ACSL3-202ENST00000392066 ATAD2BQ9ULI0 1458 aa24.52■■□□□ 1.52
ACSL3-202ENST00000392066 SCAF1Q9H7N4 1312 aaKnown RBP24.46■■□□□ 1.51
ACSL3-202ENST00000392066 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
ACSL3-202ENST00000392066 SMARCA2P51531 1590 aa24.44■■□□□ 1.5
ACSL3-202ENST00000392066 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
ACSL3-202ENST00000392066 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
ACSL3-202ENST00000392066 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
ACSL3-202ENST00000392066 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
ACSL3-202ENST00000392066 CC2D2AQ9P2K1 1620 aa24.23■■□□□ 1.47
ACSL3-202ENST00000392066 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
ACSL3-202ENST00000392066 TRIM26Q12899 539 aaPredicted RBP24.01■■□□□ 1.43
ACSL3-202ENST00000392066 MYT1Q01538 1121 aa23.99■■□□□ 1.43
ACSL3-202ENST00000392066 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
ACSL3-202ENST00000392066 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
ACSL3-202ENST00000392066 ZEB1P37275 1124 aaPredicted RBP23.82■■□□□ 1.4
ACSL3-202ENST00000392066 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
ACSL3-202ENST00000392066 CFTRP13569 1480 aa23.76■■□□□ 1.39
ACSL3-202ENST00000392066 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
ACSL3-202ENST00000392066 ACIN1Q9UKV3 1341 aaKnown RBP23.71■■□□□ 1.39
ACSL3-202ENST00000392066 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
ACSL3-202ENST00000392066 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
ACSL3-202ENST00000392066 GTF3C3Q9Y5Q9 886 aa23.66■■□□□ 1.38
ACSL3-202ENST00000392066 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
ACSL3-202ENST00000392066 PRDM2Q13029 1718 aa23.65■■□□□ 1.38
ACSL3-202ENST00000392066 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
ACSL3-202ENST00000392066 NESP48681 1621 aa23.57■■□□□ 1.36
ACSL3-202ENST00000392066 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
ACSL3-202ENST00000392066 CUX1P39880 1505 aa23.48■■□□□ 1.35
ACSL3-202ENST00000392066 SOGA1O94964 1423 aa23.48■■□□□ 1.35
ACSL3-202ENST00000392066 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
ACSL3-202ENST00000392066 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
ACSL3-202ENST00000392066 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
ACSL3-202ENST00000392066 FANCD2Q9BXW9 1451 aa23.42■■□□□ 1.34
ACSL3-202ENST00000392066 CENPBP07199 599 aaPredicted RBP23.37■■□□□ 1.33
ACSL3-202ENST00000392066 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
ACSL3-202ENST00000392066 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
ACSL3-202ENST00000392066 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
ACSL3-202ENST00000392066 EEA1Q15075 1411 aa23.24■■□□□ 1.31
ACSL3-202ENST00000392066 DIEXFQ68CQ4 756 aaKnown RBP23.21■■□□□ 1.31
ACSL3-202ENST00000392066 PDS5BQ9NTI5 1447 aa23.21■■□□□ 1.31
ACSL3-202ENST00000392066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.2■■□□□ 1.3
ACSL3-202ENST00000392066 DNMBPQ6XZF7 1577 aa23.2■■□□□ 1.3
ACSL3-202ENST00000392066 FGD5Q6ZNL6 1462 aa23.2■■□□□ 1.3
ACSL3-202ENST00000392066 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
ACSL3-202ENST00000392066 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
ACSL3-202ENST00000392066 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
ACSL3-202ENST00000392066 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
ACSL3-202ENST00000392066 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
ACSL3-202ENST00000392066 POLA1P09884 1462 aaPredicted RBP23.09■■□□□ 1.29
ACSL3-202ENST00000392066 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
ACSL3-202ENST00000392066 KIF21BO75037 1637 aa23.04■■□□□ 1.28
ACSL3-202ENST00000392066 KIF27Q86VH2 1401 aa23.03■■□□□ 1.28
ACSL3-202ENST00000392066 CUX2O14529 1486 aa23.03■■□□□ 1.28
ACSL3-202ENST00000392066 GOLGA3Q08378 1498 aa23■■□□□ 1.27
ACSL3-202ENST00000392066 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
ACSL3-202ENST00000392066 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
ACSL3-202ENST00000392066 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.26
ACSL3-202ENST00000392066 PRXQ9BXM0 1461 aa22.94■■□□□ 1.26
ACSL3-202ENST00000392066 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
ACSL3-202ENST00000392066 TNIKQ9UKE5 1360 aa22.93■■□□□ 1.26
ACSL3-202ENST00000392066 UBTFP17480 764 aaKnown RBP22.91■■□□□ 1.26
ACSL3-202ENST00000392066 IGF1RP08069 1367 aa22.89■■□□□ 1.26
ACSL3-202ENST00000392066 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
ACSL3-202ENST00000392066 WDR62O43379 1518 aa22.86■■□□□ 1.25
ACSL3-202ENST00000392066 CEP162Q5TB80 1403 aa22.86■■□□□ 1.25
ACSL3-202ENST00000392066 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
ACSL3-202ENST00000392066 ERICH3Q5RHP9 1530 aa22.85■■□□□ 1.25
ACSL3-202ENST00000392066 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
ACSL3-202ENST00000392066 ABCA5Q8WWZ7 1642 aa22.81■■□□□ 1.24
ACSL3-202ENST00000392066 TDRD9Q8NDG6 1382 aaKnown RBP22.81■■□□□ 1.24
ACSL3-202ENST00000392066 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
ACSL3-202ENST00000392066 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms