RNA–Protein interactions for RNA: ENST00000586144.1

CXXC1-203, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-203ENST00000586144 NISCHQ9Y2I1 1504 aa36.79■■■■□ 3.48
CXXC1-203ENST00000586144 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
CXXC1-203ENST00000586144 ABCC9O60706 1549 aa32.61■■■□□ 2.81
CXXC1-203ENST00000586144 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
CXXC1-203ENST00000586144 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
CXXC1-203ENST00000586144 NACADO15069 1562 aa30.91■■■□□ 2.54
CXXC1-203ENST00000586144 ZCCHC6Q5VYS8 1495 aaKnown RBP30.57■■■□□ 2.48
CXXC1-203ENST00000586144 MYO15BQ96JP2 1530 aa30.54■■■□□ 2.48
CXXC1-203ENST00000586144 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
CXXC1-203ENST00000586144 UNC13AQ9UPW8 1703 aa30.45■■■□□ 2.47
CXXC1-203ENST00000586144 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
CXXC1-203ENST00000586144 DCAF1Q9Y4B6 1507 aa30.32■■■□□ 2.44
CXXC1-203ENST00000586144 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
CXXC1-203ENST00000586144 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
CXXC1-203ENST00000586144 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
CXXC1-203ENST00000586144 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
CXXC1-203ENST00000586144 CC2D2AQ9P2K1 1620 aa29.42■■■□□ 2.3
CXXC1-203ENST00000586144 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
CXXC1-203ENST00000586144 SMARCA4P51532 1647 aa28.63■■■□□ 2.17
CXXC1-203ENST00000586144 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
CXXC1-203ENST00000586144 NCAPD3P42695 1498 aa28.56■■■□□ 2.16
CXXC1-203ENST00000586144 BAZ1AQ9NRL2 1556 aaPredicted RBP28.49■■■□□ 2.15
CXXC1-203ENST00000586144 SMARCA2P51531 1590 aa28.44■■■□□ 2.14
CXXC1-203ENST00000586144 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
CXXC1-203ENST00000586144 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
CXXC1-203ENST00000586144 BAZ1BQ9UIG0 1483 aaKnown RBP28.29■■■□□ 2.12
CXXC1-203ENST00000586144 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
CXXC1-203ENST00000586144 NESP48681 1621 aa28.14■■■□□ 2.1
CXXC1-203ENST00000586144 WIZO95785 1651 aa28.1■■■□□ 2.09
CXXC1-203ENST00000586144 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
CXXC1-203ENST00000586144 RSF1Q96T23 1441 aaPredicted RBP27.93■■■□□ 2.06
CXXC1-203ENST00000586144 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
CXXC1-203ENST00000586144 CUX2O14529 1486 aa27.82■■■□□ 2.04
CXXC1-203ENST00000586144 KIF21AQ7Z4S6 1674 aa27.74■■■□□ 2.03
CXXC1-203ENST00000586144 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
CXXC1-203ENST00000586144 THOC2Q8NI27 1593 aaKnown RBP27.7■■■□□ 2.03
CXXC1-203ENST00000586144 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
CXXC1-203ENST00000586144 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
CXXC1-203ENST00000586144 CFTRP13569 1480 aa27.49■■□□□ 1.99
CXXC1-203ENST00000586144 DNAJC5Q9H3Z4 198 aa27.48■■□□□ 1.99
CXXC1-203ENST00000586144 MRC2Q9UBG0 1479 aa27.45■■□□□ 1.99
CXXC1-203ENST00000586144 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
CXXC1-203ENST00000586144 CCDC88BA6NC98 1476 aa27.43■■□□□ 1.98
CXXC1-203ENST00000586144 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
CXXC1-203ENST00000586144 WDR62O43379 1518 aa27.37■■□□□ 1.97
CXXC1-203ENST00000586144 URB2Q14146 1524 aaKnown RBP27.24■■□□□ 1.95
CXXC1-203ENST00000586144 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
CXXC1-203ENST00000586144 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
CXXC1-203ENST00000586144 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
CXXC1-203ENST00000586144 ZNF608Q9ULD9 1512 aaPredicted RBP26.88■■□□□ 1.89
CXXC1-203ENST00000586144 DNMBPQ6XZF7 1577 aa26.87■■□□□ 1.89
CXXC1-203ENST00000586144 IFT140Q96RY7 1462 aa26.83■■□□□ 1.89
CXXC1-203ENST00000586144 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
CXXC1-203ENST00000586144 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
CXXC1-203ENST00000586144 TARBP1Q13395 1621 aaKnown RBP26.7■■□□□ 1.86
CXXC1-203ENST00000586144 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
CXXC1-203ENST00000586144 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
CXXC1-203ENST00000586144 CUX1P39880 1505 aa26.67■■□□□ 1.86
CXXC1-203ENST00000586144 AQRO60306 1485 aaKnown RBP eCLIP26.67■■□□□ 1.865e-6■■■■□ 20.7
CXXC1-203ENST00000586144 OSCARQ8IYS5 282 aa26.65■■□□□ 1.86
CXXC1-203ENST00000586144 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
CXXC1-203ENST00000586144 SOGA1O94964 1423 aa26.59■■□□□ 1.85
CXXC1-203ENST00000586144 TDRD9Q8NDG6 1382 aaKnown RBP26.55■■□□□ 1.84
CXXC1-203ENST00000586144 TRIM41Q8WV44 630 aa26.51■■□□□ 1.83
CXXC1-203ENST00000586144 CHD1O14646 1710 aa26.43■■□□□ 1.82
CXXC1-203ENST00000586144 FBLN2P98095 1184 aa26.41■■□□□ 1.82
CXXC1-203ENST00000586144 WDR97A6NE52 1622 aa26.39■■□□□ 1.81
CXXC1-203ENST00000586144 SNAPC4Q5SXM2 1469 aa26.37■■□□□ 1.81
CXXC1-203ENST00000586144 SYNJ1O43426 1573 aa26.33■■□□□ 1.81
CXXC1-203ENST00000586144 RIMBP3CA6NJZ7 1639 aa26.32■■□□□ 1.8
CXXC1-203ENST00000586144 RIMBP3BA6NNM3 1639 aa26.32■■□□□ 1.8
CXXC1-203ENST00000586144 RIMBP3Q9UFD9 1639 aa26.32■■□□□ 1.8
CXXC1-203ENST00000586144 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
CXXC1-203ENST00000586144 GRIN2BQ13224 1484 aa26.29■■□□□ 1.8
CXXC1-203ENST00000586144 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
CXXC1-203ENST00000586144 TOP2BQ02880 1626 aa26.28■■□□□ 1.8
CXXC1-203ENST00000586144 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
CXXC1-203ENST00000586144 GAPVD1Q14C86 1478 aa26.26■■□□□ 1.79
CXXC1-203ENST00000586144 ARHGEF11O15085 1522 aa26.25■■□□□ 1.79
CXXC1-203ENST00000586144 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
CXXC1-203ENST00000586144 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
CXXC1-203ENST00000586144 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
CXXC1-203ENST00000586144 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
CXXC1-203ENST00000586144 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
CXXC1-203ENST00000586144 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
CXXC1-203ENST00000586144 CYB5RLQ6IPT4 315 aa26.08■■□□□ 1.77
CXXC1-203ENST00000586144 ARAP1Q96P48 1450 aa26.05■■□□□ 1.76
CXXC1-203ENST00000586144 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
CXXC1-203ENST00000586144 GRIN2AQ12879 1464 aa25.97■■□□□ 1.75
CXXC1-203ENST00000586144 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
CXXC1-203ENST00000586144 FHAD1B1AJZ9 1412 aa25.92■■□□□ 1.74
CXXC1-203ENST00000586144 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
CXXC1-203ENST00000586144 NUP160Q12769 1436 aa25.87■■□□□ 1.73
CXXC1-203ENST00000586144 ERCC6L2Q5T890 1561 aa25.84■■□□□ 1.73
CXXC1-203ENST00000586144 IGF1RP08069 1367 aa25.76■■□□□ 1.71
CXXC1-203ENST00000586144 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
CXXC1-203ENST00000586144 SHROOM2Q13796 1616 aa25.7■■□□□ 1.71
CXXC1-203ENST00000586144 TRHP20396 242 aaPredicted RBP25.66■■□□□ 1.7
CXXC1-203ENST00000586144 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.7
CXXC1-203ENST00000586144 JPH4Q96JJ6 628 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms