Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 MAN2A2-217ENST00000559965 537 ntTSL 410.06□□□□□ -0.82e-9■■■□□ 18.3
SRSF1Q07955 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.872e-9■■■□□ 18.3
SRSF1Q07955 IQGAP3-203ENST00000491900 5294 ntTSL 1 (best)9.55□□□□□ -0.882e-9■■■□□ 18.3
SRSF1Q07955 NUP85-206ENST00000577645 869 ntTSL 38.93□□□□□ -0.982e-9■■■□□ 18.3
SRSF1Q07955 NUP85-208ENST00000578830 922 ntTSL 58.9□□□□□ -0.982e-9■■■□□ 18.3
SRSF1Q07955 NUP85-223ENST00000583877 575 ntTSL 38.9□□□□□ -0.982e-9■■■□□ 18.3
SRSF1Q07955 NUP85-212ENST00000579557 817 ntTSL 58.8□□□□□ -12e-9■■■□□ 18.3
SRSF1Q07955 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.82e-6■■■□□ 18.3
SRSF1Q07955 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.718e-7■■■□□ 18.3
SRSF1Q07955 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC13.02□□□□□ -0.336e-6■■■□□ 18.3
SRSF1Q07955 DYNLT1-203ENST00000367089 726 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.816e-6■■■□□ 18.3
SRSF1Q07955 SGSM2-203ENST00000570431 392 ntTSL 312.5□□□□□ -0.418e-7■■■□□ 18.3
SRSF1Q07955 SGSM2-213ENST00000574857 3885 ntTSL 211.39□□□□□ -0.598e-7■■■□□ 18.3
SRSF1Q07955 SRSF6-202ENST00000483871 1680 ntTSL 212.45□□□□□ -0.428e-12■■■□□ 18.3
SRSF1Q07955 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.238e-12■■■□□ 18.3
SRSF1Q07955 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.316e-7■■■□□ 18.3
SRSF1Q07955 SHROOM1-204ENST00000440118 1080 ntTSL 218.74■□□□□ 0.591e-6■■■□□ 18.3
SRSF1Q07955 PHKB-207ENST00000566037 1032 ntTSL 222.12■■□□□ 1.135e-7■■■□□ 18.3
SRSF1Q07955 PHKB-203ENST00000563376 697 ntTSL 312.61□□□□□ -0.395e-7■■■□□ 18.3
SRSF1Q07955 PHKB-202ENST00000323584 4283 ntTSL 1 (best) BASIC9.65□□□□□ -0.865e-7■■■□□ 18.3
SRSF1Q07955 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.885e-7■■■□□ 18.3
SRSF1Q07955 PHKB-214ENST00000567402 1617 ntTSL 1 (best)8.44□□□□□ -1.065e-7■■■□□ 18.3
SRSF1Q07955 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.2□□□□□ -1.425e-7■■■□□ 18.3
SRSF1Q07955 PHKB-206ENST00000565424 828 ntTSL 34.87□□□□□ -1.635e-7■■■□□ 18.3
SRSF1Q07955 PHKB-212ENST00000566721 523 ntTSL 34.45□□□□□ -1.75e-7■■■□□ 18.3
SRSF1Q07955 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.37■□□□□ 0.051e-9■■■□□ 18.2
SRSF1Q07955 FMO5-205ENST00000527849 2410 ntTSL 513.66□□□□□ -0.221e-9■■■□□ 18.2
SRSF1Q07955 FMO5-209ENST00000619062 1842 ntTSL 212.11□□□□□ -0.471e-9■■■□□ 18.2
SRSF1Q07955 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.481e-9■■■□□ 18.2
SRSF1Q07955 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC8.42□□□□□ -1.061e-9■■■□□ 18.2
SRSF1Q07955 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC7.37□□□□□ -1.231e-9■■■□□ 18.2
SRSF1Q07955 FMO5-206ENST00000533174 671 ntTSL 46.98□□□□□ -1.291e-9■■■□□ 18.2
SRSF1Q07955 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.27■■□□□ 11e-6■■■□□ 18.2
SRSF1Q07955 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.761e-6■■■□□ 18.2
SRSF1Q07955 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.131e-6■■■□□ 18.2
SRSF1Q07955 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.86□□□□□ -0.351e-6■■■□□ 18.2
SRSF1Q07955 TIAL1-211ENST00000489822 2222 ntTSL 213.21□□□□□ -0.292e-9■■■□□ 18.2
SRSF1Q07955 TIAL1-213ENST00000497671 2321 ntTSL 1 (best)11.83□□□□□ -0.522e-9■■■□□ 18.2
SRSF1Q07955 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.242e-9■■■□□ 18.2
SRSF1Q07955 TIAL1-207ENST00000463089 907 ntTSL 56.64□□□□□ -1.352e-9■■■□□ 18.2
SRSF1Q07955 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.08□□□□□ -1.442e-9■■■□□ 18.2
SRSF1Q07955 TIAL1-209ENST00000470781 1727 ntTSL 24.91□□□□□ -1.622e-9■■■□□ 18.2
SRSF1Q07955 TMEM120B-201ENST00000342607 2766 ntTSL 217.63■□□□□ 0.413e-7■■■□□ 18.2
SRSF1Q07955 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.18■□□□□ 0.023e-7■■■□□ 18.2
SRSF1Q07955 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.733e-7■■■□□ 18.2
SRSF1Q07955 TMEM120B-207ENST00000541467 2959 ntTSL 59.65□□□□□ -0.863e-7■■■□□ 18.2
SRSF1Q07955 PTBP1-217ENST00000592113 1548 ntTSL 519.5■□□□□ 0.712e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-209ENST00000586481 578 ntTSL 318.69■□□□□ 0.582e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-234ENST00000642041 943 nt16.99■□□□□ 0.312e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-210ENST00000641115 1638 ntBASIC16.93■□□□□ 0.32e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-213ENST00000641272 758 nt16.28■□□□□ 0.22e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-227ENST00000641811 1031 nt16.06■□□□□ 0.162e-10■■■□□ 18.2
SRSF1Q07955 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.032e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-230ENST00000641927 1678 nt15.12■□□□□ 0.012e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-209ENST00000641074 1780 ntBASIC15.06■□□□□ 02e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-214ENST00000641314 1558 nt14.91□□□□□ -0.022e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.63□□□□□ -0.072e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-232ENST00000641947 1774 nt14.62□□□□□ -0.072e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-226ENST00000641756 2132 nt13.88□□□□□ -0.192e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.192e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-210ENST00000586944 4661 ntTSL 213.87□□□□□ -0.192e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.85□□□□□ -0.192e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-216ENST00000641375 2196 nt13.25□□□□□ -0.292e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-211ENST00000641213 2053 nt13.01□□□□□ -0.332e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-229ENST00000641891 2175 nt12.99□□□□□ -0.332e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.64□□□□□ -0.392e-10■■■□□ 18.2
SRSF1Q07955 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.442e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-214ENST00000589575 749 ntTSL 312.31□□□□□ -0.442e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.452e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-221ENST00000641573 1180 nt12.18□□□□□ -0.462e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-218ENST00000641491 986 nt11.75□□□□□ -0.532e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.532e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC11.72□□□□□ -0.532e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-203ENST00000462324 767 ntTSL 511.69□□□□□ -0.542e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.582e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-220ENST00000641570 1036 nt11.18□□□□□ -0.622e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.06□□□□□ -0.642e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-216ENST00000590887 642 ntTSL 310.82□□□□□ -0.682e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-205ENST00000585535 314 ntTSL 310.82□□□□□ -0.682e-10■■■□□ 18.2
SRSF1Q07955 PTBP1-213ENST00000587191 357 ntTSL 510.71□□□□□ -0.692e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-233ENST00000642021 2794 nt10.5□□□□□ -0.732e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-212ENST00000641247 710 nt10.34□□□□□ -0.752e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-222ENST00000641587 566 nt10.09□□□□□ -0.792e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-201ENST00000369407 3180 ntTSL 29.43□□□□□ -0.92e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-228ENST00000641847 692 nt9.39□□□□□ -0.912e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-224ENST00000641711 712 nt8.99□□□□□ -0.972e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-217ENST00000641455 312 nt8.34□□□□□ -1.072e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-215ENST00000641371 725 nt7.85□□□□□ -1.152e-10■■■□□ 18.2
SRSF1Q07955 PHGDH-206ENST00000493622 742 ntTSL 57.16□□□□□ -1.262e-10■■■□□ 18.2
SRSF1Q07955 RNF213-205ENST00000558116 3768 ntTSL 26.51□□□□□ -1.371e-6■■■□□ 18.2
SRSF1Q07955 MTG2-207ENST00000471352 785 ntTSL 514.88□□□□□ -0.034e-7■■■□□ 18.2
SRSF1Q07955 MTG2-204ENST00000466099 805 ntTSL 513.76□□□□□ -0.214e-7■■■□□ 18.2
SRSF1Q07955 MTG2-202ENST00000448254 727 ntTSL 512.85□□□□□ -0.354e-7■■■□□ 18.2
SRSF1Q07955 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.614e-7■■■□□ 18.2
SRSF1Q07955 MTG2-206ENST00000467101 2814 ntTSL 1 (best)10.91□□□□□ -0.664e-7■■■□□ 18.2
SRSF1Q07955 MTG2-209ENST00000472005 566 ntTSL 58.82□□□□□ -14e-7■■■□□ 18.2
SRSF1Q07955 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.66■□□□□ 0.265e-7■■■□□ 18.2
SRSF1Q07955 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.85□□□□□ -0.517e-7■■■□□ 18.2
SRSF1Q07955 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.556e-7■■■□□ 18.2
SRSF1Q07955 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC10.71□□□□□ -0.695e-7■■■□□ 18.2
Retrieved 100 of 14,836 protein–RNA pairs in 83.5 ms