RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 NISCHQ9Y2I1 1504 aa22.3■■□□□ 1.16
NUP85-223ENST00000583877 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
NUP85-223ENST00000583877 AEBP2Q6ZN18 517 aaPredicted RBP20.41■□□□□ 0.86
NUP85-223ENST00000583877 ABCC9O60706 1549 aa20.27■□□□□ 0.83
NUP85-223ENST00000583877 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
NUP85-223ENST00000583877 RB1CC1Q8TDY2 1594 aa19.27■□□□□ 0.68
NUP85-223ENST00000583877 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
NUP85-223ENST00000583877 NACADO15069 1562 aa19.09■□□□□ 0.65
NUP85-223ENST00000583877 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
NUP85-223ENST00000583877 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
NUP85-223ENST00000583877 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
NUP85-223ENST00000583877 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
NUP85-223ENST00000583877 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
NUP85-223ENST00000583877 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.54
NUP85-223ENST00000583877 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
NUP85-223ENST00000583877 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
NUP85-223ENST00000583877 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
NUP85-223ENST00000583877 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
NUP85-223ENST00000583877 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
NUP85-223ENST00000583877 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
NUP85-223ENST00000583877 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
NUP85-223ENST00000583877 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
NUP85-223ENST00000583877 CUX2O14529 1486 aa17.61■□□□□ 0.41
NUP85-223ENST00000583877 NCAPD3P42695 1498 aa17.58■□□□□ 0.41
NUP85-223ENST00000583877 ERCC6Q03468 1493 aa17.53■□□□□ 0.4
NUP85-223ENST00000583877 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
NUP85-223ENST00000583877 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
NUP85-223ENST00000583877 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
NUP85-223ENST00000583877 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
NUP85-223ENST00000583877 NESP48681 1621 aa17.36■□□□□ 0.37
NUP85-223ENST00000583877 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
NUP85-223ENST00000583877 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
NUP85-223ENST00000583877 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
NUP85-223ENST00000583877 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
NUP85-223ENST00000583877 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
NUP85-223ENST00000583877 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
NUP85-223ENST00000583877 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
NUP85-223ENST00000583877 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
NUP85-223ENST00000583877 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
NUP85-223ENST00000583877 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
NUP85-223ENST00000583877 WIZO95785 1651 aa17■□□□□ 0.31
NUP85-223ENST00000583877 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
NUP85-223ENST00000583877 WDR62O43379 1518 aa16.99■□□□□ 0.31
NUP85-223ENST00000583877 CEP164Q9UPV0 1460 aa16.89■□□□□ 0.29
NUP85-223ENST00000583877 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
NUP85-223ENST00000583877 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
NUP85-223ENST00000583877 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
NUP85-223ENST00000583877 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
NUP85-223ENST00000583877 CFTRP13569 1480 aa16.8■□□□□ 0.28
NUP85-223ENST00000583877 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
NUP85-223ENST00000583877 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
NUP85-223ENST00000583877 OSCARQ8IYS5 282 aa16.71■□□□□ 0.27
NUP85-223ENST00000583877 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
NUP85-223ENST00000583877 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
NUP85-223ENST00000583877 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
NUP85-223ENST00000583877 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
NUP85-223ENST00000583877 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
NUP85-223ENST00000583877 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
NUP85-223ENST00000583877 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.23
NUP85-223ENST00000583877 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
NUP85-223ENST00000583877 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
NUP85-223ENST00000583877 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
NUP85-223ENST00000583877 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
NUP85-223ENST00000583877 CHD1O14646 1710 aa16.48■□□□□ 0.23
NUP85-223ENST00000583877 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
NUP85-223ENST00000583877 TARBP1Q13395 1621 aaKnown RBP16.42■□□□□ 0.22
NUP85-223ENST00000583877 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■■■□ 24.7
NUP85-223ENST00000583877 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
NUP85-223ENST00000583877 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
NUP85-223ENST00000583877 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
NUP85-223ENST00000583877 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
NUP85-223ENST00000583877 FBLN2P98095 1184 aa16.24■□□□□ 0.19
NUP85-223ENST00000583877 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
NUP85-223ENST00000583877 SOGA1O94964 1423 aa16.22■□□□□ 0.19
NUP85-223ENST00000583877 CLASP1Q7Z460 1538 aa16.21■□□□□ 0.19
NUP85-223ENST00000583877 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
NUP85-223ENST00000583877 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
NUP85-223ENST00000583877 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
NUP85-223ENST00000583877 SYNJ1O43426 1573 aa16.18■□□□□ 0.18
NUP85-223ENST00000583877 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
NUP85-223ENST00000583877 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
NUP85-223ENST00000583877 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
NUP85-223ENST00000583877 CUX1P39880 1505 aa16.14■□□□□ 0.18
NUP85-223ENST00000583877 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
NUP85-223ENST00000583877 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
NUP85-223ENST00000583877 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
NUP85-223ENST00000583877 ABCA5Q8WWZ7 1642 aa16.04■□□□□ 0.16
NUP85-223ENST00000583877 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
NUP85-223ENST00000583877 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
NUP85-223ENST00000583877 FOXD1Q16676 465 aa15.93■□□□□ 0.14
NUP85-223ENST00000583877 GRIN2AQ12879 1464 aa15.92■□□□□ 0.14
NUP85-223ENST00000583877 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
NUP85-223ENST00000583877 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
NUP85-223ENST00000583877 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
NUP85-223ENST00000583877 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
NUP85-223ENST00000583877 CEP170Q5SW79 1584 aa15.89■□□□□ 0.13
NUP85-223ENST00000583877 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
NUP85-223ENST00000583877 NUP160Q12769 1436 aa15.87■□□□□ 0.13
NUP85-223ENST00000583877 WRNQ14191 1432 aaPredicted RBP eCLIP15.87■□□□□ 0.13
NUP85-223ENST00000583877 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms