RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 PELP1Q8IZL8 1130 aaKnown RBP20.56■□□□□ 0.88
TPR-201ENST00000367478 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
TPR-201ENST00000367478 CCER1Q8TC90 406 aaPredicted RBP19.58■□□□□ 0.72
TPR-201ENST00000367478 MYT1Q01538 1121 aa19.51■□□□□ 0.71
TPR-201ENST00000367478 ERICH6Q7L0X2 663 aa19.47■□□□□ 0.71
TPR-201ENST00000367478 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
TPR-201ENST00000367478 APLP2Q06481 763 aa19.32■□□□□ 0.68
TPR-201ENST00000367478 FAM9AQ8IZU1 332 aaPredicted RBP19.21■□□□□ 0.67
TPR-201ENST00000367478 CENPBP07199 599 aaPredicted RBP19.2■□□□□ 0.66
TPR-201ENST00000367478 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
TPR-201ENST00000367478 NEFLP07196 543 aa18.87■□□□□ 0.61
TPR-201ENST00000367478 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
TPR-201ENST00000367478 EHMT2Q96KQ7 1210 aa18.77■□□□□ 0.6
TPR-201ENST00000367478 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
TPR-201ENST00000367478 DAXXQ9UER7 740 aaPredicted RBP18.6■□□□□ 0.57
TPR-201ENST00000367478 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
TPR-201ENST00000367478 NISCHQ9Y2I1 1504 aa18.4■□□□□ 0.54
TPR-201ENST00000367478 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
TPR-201ENST00000367478 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
TPR-201ENST00000367478 RTL5Q5HYW3 569 aaPredicted RBP18.12■□□□□ 0.49
TPR-201ENST00000367478 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
TPR-201ENST00000367478 ZNF316A6NFI3 1004 aaPredicted RBP18.05■□□□□ 0.48
TPR-201ENST00000367478 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.48
TPR-201ENST00000367478 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
TPR-201ENST00000367478 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
TPR-201ENST00000367478 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
TPR-201ENST00000367478 POLR3GLQ9BT43 218 aa17.69■□□□□ 0.42
TPR-201ENST00000367478 HRCP23327 699 aa17.66■□□□□ 0.42
TPR-201ENST00000367478 MYT1LQ9UL68 1186 aa17.63■□□□□ 0.41
TPR-201ENST00000367478 ZBTB47Q9UFB7 747 aaPredicted RBP17.58■□□□□ 0.41
TPR-201ENST00000367478 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
TPR-201ENST00000367478 GLIPR1L2Q4G1C9 344 aa17.48■□□□□ 0.39
TPR-201ENST00000367478 CDK11AQ9UQ88 783 aaPredicted RBP17.48■□□□□ 0.39
TPR-201ENST00000367478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
TPR-201ENST00000367478 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
TPR-201ENST00000367478 DIEXFQ68CQ4 756 aaKnown RBP17.42■□□□□ 0.38
TPR-201ENST00000367478 ITGAEP38570 1179 aa17.41■□□□□ 0.38
TPR-201ENST00000367478 ANP32BQ92688 251 aaKnown RBP17.41■□□□□ 0.38
TPR-201ENST00000367478 PPARGC1BQ86YN6 1023 aaKnown RBP17.34■□□□□ 0.37
TPR-201ENST00000367478 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
TPR-201ENST00000367478 ANP32AP39687 249 aaKnown RBP17.31■□□□□ 0.36
TPR-201ENST00000367478 ANP32CO43423 234 aa17.24■□□□□ 0.35
TPR-201ENST00000367478 NEFMP07197 916 aa17.23■□□□□ 0.35
TPR-201ENST00000367478 CANXP27824 592 aaKnown RBP17.22■□□□□ 0.35
TPR-201ENST00000367478 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
TPR-201ENST00000367478 EIF5BO60841 1220 aaKnown RBP17.14■□□□□ 0.33
TPR-201ENST00000367478 UPF2Q9HAU5 1272 aaKnown RBP17.09■□□□□ 0.33
TPR-201ENST00000367478 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.33
TPR-201ENST00000367478 GTF3C3Q9Y5Q9 886 aa17.08■□□□□ 0.33
TPR-201ENST00000367478 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
TPR-201ENST00000367478 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.32
TPR-201ENST00000367478 BCANQ96GW7 911 aa17.02■□□□□ 0.32
TPR-201ENST00000367478 SLC24A1O60721 1099 aa17■□□□□ 0.31
TPR-201ENST00000367478 NEUROD1Q13562 356 aa16.91■□□□□ 0.3
TPR-201ENST00000367478 CDK11BP21127 795 aaKnown RBP16.9■□□□□ 0.3
TPR-201ENST00000367478 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
TPR-201ENST00000367478 BCL11AQ9H165 835 aa16.85■□□□□ 0.29
TPR-201ENST00000367478 LOC105371045A0A1W2PR82 267 aa16.84■□□□□ 0.29
TPR-201ENST00000367478 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
TPR-201ENST00000367478 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
TPR-201ENST00000367478 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
TPR-201ENST00000367478 ACIN1Q9UKV3 1341 aaKnown RBP16.78■□□□□ 0.28
TPR-201ENST00000367478 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.75■□□□□ 0.27
TPR-201ENST00000367478 TRIM44Q96DX7 344 aaPredicted RBP16.68■□□□□ 0.26
TPR-201ENST00000367478 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
TPR-201ENST00000367478 BECN1Q14457 450 aa16.61■□□□□ 0.25
TPR-201ENST00000367478 FKBP8Q14318 412 aa16.6■□□□□ 0.25
TPR-201ENST00000367478 GOLGA6L22H0YM25 854 aa16.6■□□□□ 0.25
TPR-201ENST00000367478 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
TPR-201ENST00000367478 MYH16Q9H6N6 1097 aa16.59■□□□□ 0.25
TPR-201ENST00000367478 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
TPR-201ENST00000367478 NBR1Q14596 966 aa16.56■□□□□ 0.24
TPR-201ENST00000367478 ZRSR1Q15695 479 aaKnown RBP16.52■□□□□ 0.24
TPR-201ENST00000367478 TONSLQ96HA7 1378 aa16.52■□□□□ 0.23
TPR-201ENST00000367478 HNRNPUQ00839 825 aaKnown RBP eCLIP16.52■□□□□ 0.23
TPR-201ENST00000367478 ESF1Q9H501 851 aaKnown RBP16.5■□□□□ 0.23
TPR-201ENST00000367478 ERICH6BQ5W0A0 696 aa16.49■□□□□ 0.23
TPR-201ENST00000367478 TMC1Q8TDI8 760 aa16.47■□□□□ 0.23
TPR-201ENST00000367478 ARXQ96QS3 562 aa16.46■□□□□ 0.22
TPR-201ENST00000367478 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.224e-7■□□□□ 9.9
TPR-201ENST00000367478 PTMAP06454 111 aaKnown RBP16.42■□□□□ 0.22
TPR-201ENST00000367478 DNTTIP2Q5QJE6 756 aaKnown RBP16.42■□□□□ 0.22
TPR-201ENST00000367478 GOLGA6L6A8MZA4 724 aa16.4■□□□□ 0.22
TPR-201ENST00000367478 CASC1Q6TDU7 716 aa16.39■□□□□ 0.21
TPR-201ENST00000367478 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
TPR-201ENST00000367478 NRDCO43847 1150 aa16.39■□□□□ 0.21
TPR-201ENST00000367478 FAM9BQ8IZU0 186 aa16.38■□□□□ 0.21
TPR-201ENST00000367478 PPM1GO15355 546 aaPredicted RBP16.32■□□□□ 0.2
TPR-201ENST00000367478 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
TPR-201ENST00000367478 L1TD1Q5T7N2 865 aaKnown RBP16.3■□□□□ 0.2
TPR-201ENST00000367478 FBLN2P98095 1184 aa16.29■□□□□ 0.2
TPR-201ENST00000367478 NAP1L5Q96NT1 182 aaPredicted RBP16.25■□□□□ 0.19
TPR-201ENST00000367478 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
TPR-201ENST00000367478 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
TPR-201ENST00000367478 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
TPR-201ENST00000367478 CHGAP10645 457 aaKnown RBP16.21■□□□□ 0.19
TPR-201ENST00000367478 SALL2Q9Y467 1007 aaPredicted RBP16.21■□□□□ 0.19
TPR-201ENST00000367478 CHMP4BQ9H444 224 aaKnown RBP16.21■□□□□ 0.19
TPR-201ENST00000367478 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
TPR-201ENST00000367478 MSNP26038 577 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms