RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 NISCHQ9Y2I1 1504 aa40.64■■■■■ 4.1
PHGDH-214ENST00000641314 CCDC180Q9P1Z9 1646 aa35.64■■■■□ 3.3
PHGDH-214ENST00000641314 ZCCHC6Q5VYS8 1495 aaKnown RBP34.06■■■■□ 3.04
PHGDH-214ENST00000641314 ABCC9O60706 1549 aa34.05■■■■□ 3.04
PHGDH-214ENST00000641314 DCAF8L2P0C7V8 631 aa33.73■■■□□ 2.99
PHGDH-214ENST00000641314 DCAF1Q9Y4B6 1507 aa33.58■■■□□ 2.97
PHGDH-214ENST00000641314 MYO15BQ96JP2 1530 aa33.31■■■□□ 2.92
PHGDH-214ENST00000641314 NACADO15069 1562 aa33.26■■■□□ 2.92
PHGDH-214ENST00000641314 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
PHGDH-214ENST00000641314 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.87
PHGDH-214ENST00000641314 SCRIBQ14160 1630 aa32.76■■■□□ 2.83
PHGDH-214ENST00000641314 UNC13AQ9UPW8 1703 aa32.41■■■□□ 2.78
PHGDH-214ENST00000641314 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
PHGDH-214ENST00000641314 PABPN1Q86U42 306 aaKnown RBP eCLIP32.02■■■□□ 2.72
PHGDH-214ENST00000641314 CECR2Q9BXF3 1484 aa31.62■■■□□ 2.65
PHGDH-214ENST00000641314 SUPT5HO00267 1087 aaKnown RBP31.51■■■□□ 2.63
PHGDH-214ENST00000641314 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
PHGDH-214ENST00000641314 MROH2BQ7Z745 1585 aa31.4■■■□□ 2.62
PHGDH-214ENST00000641314 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
PHGDH-214ENST00000641314 SMARCA4P51532 1647 aa31.35■■■□□ 2.61
PHGDH-214ENST00000641314 EIF4G1Q04637 1599 aaKnown RBP31.15■■■□□ 2.58
PHGDH-214ENST00000641314 WIZO95785 1651 aa31.14■■■□□ 2.58
PHGDH-214ENST00000641314 PEG3Q9GZU2 1588 aa30.93■■■□□ 2.54
PHGDH-214ENST00000641314 ATAD2BQ9ULI0 1458 aa30.9■■■□□ 2.54
PHGDH-214ENST00000641314 SMARCA2P51531 1590 aa30.89■■■□□ 2.53
PHGDH-214ENST00000641314 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
PHGDH-214ENST00000641314 CC2D2AQ9P2K1 1620 aa30.8■■■□□ 2.52
PHGDH-214ENST00000641314 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
PHGDH-214ENST00000641314 NCAPD3P42695 1498 aa30.67■■■□□ 2.5
PHGDH-214ENST00000641314 HMGXB3Q12766 1538 aa30.63■■■□□ 2.49
PHGDH-214ENST00000641314 CCDC88BA6NC98 1476 aa30.47■■■□□ 2.47
PHGDH-214ENST00000641314 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
PHGDH-214ENST00000641314 CHIC1Q5VXU3 224 aa29.92■■■□□ 2.38
PHGDH-214ENST00000641314 CFTRP13569 1480 aa29.9■■■□□ 2.38
PHGDH-214ENST00000641314 CADPSQ9ULU8 1353 aa29.88■■■□□ 2.37
PHGDH-214ENST00000641314 PRDM2Q13029 1718 aa29.78■■■□□ 2.36
PHGDH-214ENST00000641314 NESP48681 1621 aa29.76■■■□□ 2.36
PHGDH-214ENST00000641314 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
PHGDH-214ENST00000641314 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
PHGDH-214ENST00000641314 TRIM41Q8WV44 630 aa29.64■■■□□ 2.33
PHGDH-214ENST00000641314 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
PHGDH-214ENST00000641314 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.32
PHGDH-214ENST00000641314 PDS5BQ9NTI5 1447 aa29.51■■■□□ 2.31
PHGDH-214ENST00000641314 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
PHGDH-214ENST00000641314 CEP164Q9UPV0 1460 aa29.44■■■□□ 2.3
PHGDH-214ENST00000641314 KIF21AQ7Z4S6 1674 aa29.42■■■□□ 2.3
PHGDH-214ENST00000641314 CUX1P39880 1505 aa29.39■■■□□ 2.29
PHGDH-214ENST00000641314 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
PHGDH-214ENST00000641314 BIVM-ERCC5R4GMW8 1640 aa29.36■■■□□ 2.29
PHGDH-214ENST00000641314 DNMBPQ6XZF7 1577 aa29.25■■■□□ 2.27
PHGDH-214ENST00000641314 ERCC6Q03468 1493 aa29.25■■■□□ 2.27
PHGDH-214ENST00000641314 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
PHGDH-214ENST00000641314 TOPBP1Q92547 1522 aa29.21■■■□□ 2.27
PHGDH-214ENST00000641314 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
PHGDH-214ENST00000641314 FGD5Q6ZNL6 1462 aa29.13■■■□□ 2.25
PHGDH-214ENST00000641314 FAM9AQ8IZU1 332 aaPredicted RBP29.11■■■□□ 2.25
PHGDH-214ENST00000641314 SOGA1O94964 1423 aa29.07■■■□□ 2.24
PHGDH-214ENST00000641314 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
PHGDH-214ENST00000641314 THOC2Q8NI27 1593 aaKnown RBP29.02■■■□□ 2.24
PHGDH-214ENST00000641314 WDR62O43379 1518 aa29.01■■■□□ 2.23
PHGDH-214ENST00000641314 RUSC2Q8N2Y8 1516 aa28.99■■■□□ 2.23
PHGDH-214ENST00000641314 RAD54L2Q9Y4B4 1467 aa28.95■■■□□ 2.22
PHGDH-214ENST00000641314 EEA1Q15075 1411 aa28.94■■■□□ 2.22
PHGDH-214ENST00000641314 CUX2O14529 1486 aa28.89■■■□□ 2.21
PHGDH-214ENST00000641314 KIF27Q86VH2 1401 aa28.85■■■□□ 2.21
PHGDH-214ENST00000641314 ABCA10Q8WWZ4 1543 aa28.85■■■□□ 2.21
PHGDH-214ENST00000641314 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
PHGDH-214ENST00000641314 CSRNP3Q8WYN3 585 aa28.81■■■□□ 2.2
PHGDH-214ENST00000641314 TARBP1Q13395 1621 aaKnown RBP28.79■■■□□ 2.2
PHGDH-214ENST00000641314 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
PHGDH-214ENST00000641314 EHMT2Q96KQ7 1210 aa28.75■■■□□ 2.19
PHGDH-214ENST00000641314 IFT140Q96RY7 1462 aa28.75■■■□□ 2.19
PHGDH-214ENST00000641314 TDRD9Q8NDG6 1382 aaKnown RBP28.7■■■□□ 2.18
PHGDH-214ENST00000641314 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
PHGDH-214ENST00000641314 GAPVD1Q14C86 1478 aa28.62■■■□□ 2.17
PHGDH-214ENST00000641314 IGF1RP08069 1367 aa28.61■■■□□ 2.17
PHGDH-214ENST00000641314 ZNF608Q9ULD9 1512 aaPredicted RBP28.6■■■□□ 2.17
PHGDH-214ENST00000641314 KIF21BO75037 1637 aa28.6■■■□□ 2.17
PHGDH-214ENST00000641314 AQRO60306 1485 aaKnown RBP eCLIP28.58■■■□□ 2.171e-6■■□□□ 14.4
PHGDH-214ENST00000641314 GOLGA3Q08378 1498 aa28.55■■■□□ 2.16
PHGDH-214ENST00000641314 PRXQ9BXM0 1461 aa28.54■■■□□ 2.16
PHGDH-214ENST00000641314 EIF4G3O43432 1585 aaKnown RBP28.52■■■□□ 2.16
PHGDH-214ENST00000641314 PBRM1Q86U86 1689 aa28.52■■■□□ 2.16
PHGDH-214ENST00000641314 ERICH3Q5RHP9 1530 aa28.51■■■□□ 2.15
PHGDH-214ENST00000641314 RAPGEF2Q9Y4G8 1499 aa28.5■■■□□ 2.15
PHGDH-214ENST00000641314 CARMIL1Q5VZK9 1371 aa28.48■■■□□ 2.15
PHGDH-214ENST00000641314 CUL7Q14999 1698 aa28.47■■■□□ 2.15
PHGDH-214ENST00000641314 GRIN2BQ13224 1484 aa28.45■■■□□ 2.15
PHGDH-214ENST00000641314 UBTFP17480 764 aaKnown RBP28.45■■■□□ 2.14
PHGDH-214ENST00000641314 TNIKQ9UKE5 1360 aa28.36■■■□□ 2.13
PHGDH-214ENST00000641314 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
PHGDH-214ENST00000641314 SNAPC4Q5SXM2 1469 aa28.33■■■□□ 2.13
PHGDH-214ENST00000641314 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
PHGDH-214ENST00000641314 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
PHGDH-214ENST00000641314 CEP162Q5TB80 1403 aa28.2■■■□□ 2.11
PHGDH-214ENST00000641314 SYNJ2O15056 1496 aa28.14■■■□□ 2.1
PHGDH-214ENST00000641314 RANGAP1P46060 587 aaPredicted RBP28.14■■■□□ 2.1
PHGDH-214ENST00000641314 CTTNBP2Q8WZ74 1663 aa28.12■■■□□ 2.09
PHGDH-214ENST00000641314 CHMP7Q8WUX9 453 aaPredicted RBP28.11■■■□□ 2.09
PHGDH-214ENST00000641314 FBLN2P98095 1184 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms