RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-208ENST00000578830 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
NUP85-208ENST00000578830 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
NUP85-208ENST00000578830 NISCHQ9Y2I1 1504 aa22.3■■□□□ 1.16
NUP85-208ENST00000578830 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
NUP85-208ENST00000578830 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
NUP85-208ENST00000578830 ABCC9O60706 1549 aa20.27■□□□□ 0.83
NUP85-208ENST00000578830 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
NUP85-208ENST00000578830 FOXD1Q16676 465 aa19.51■□□□□ 0.71
NUP85-208ENST00000578830 RB1CC1Q8TDY2 1594 aa19.27■□□□□ 0.68
NUP85-208ENST00000578830 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
NUP85-208ENST00000578830 NACADO15069 1562 aa19.09■□□□□ 0.65
NUP85-208ENST00000578830 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
NUP85-208ENST00000578830 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
NUP85-208ENST00000578830 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
NUP85-208ENST00000578830 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
NUP85-208ENST00000578830 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
NUP85-208ENST00000578830 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
NUP85-208ENST00000578830 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
NUP85-208ENST00000578830 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.54
NUP85-208ENST00000578830 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
NUP85-208ENST00000578830 ADRA2BP18089 450 aa18.44■□□□□ 0.54
NUP85-208ENST00000578830 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
NUP85-208ENST00000578830 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
NUP85-208ENST00000578830 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
NUP85-208ENST00000578830 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
NUP85-208ENST00000578830 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
NUP85-208ENST00000578830 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
NUP85-208ENST00000578830 MSH5O43196 834 aa18.08■□□□□ 0.48
NUP85-208ENST00000578830 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
NUP85-208ENST00000578830 CUX2O14529 1486 aa17.61■□□□□ 0.41
NUP85-208ENST00000578830 NCAPD3P42695 1498 aa17.58■□□□□ 0.41
NUP85-208ENST00000578830 ERCC6Q03468 1493 aa17.53■□□□□ 0.4
NUP85-208ENST00000578830 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
NUP85-208ENST00000578830 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
NUP85-208ENST00000578830 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
NUP85-208ENST00000578830 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
NUP85-208ENST00000578830 NESP48681 1621 aa17.36■□□□□ 0.37
NUP85-208ENST00000578830 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
NUP85-208ENST00000578830 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
NUP85-208ENST00000578830 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
NUP85-208ENST00000578830 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
NUP85-208ENST00000578830 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
NUP85-208ENST00000578830 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
NUP85-208ENST00000578830 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
NUP85-208ENST00000578830 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
NUP85-208ENST00000578830 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
NUP85-208ENST00000578830 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
NUP85-208ENST00000578830 WIZO95785 1651 aa17■□□□□ 0.31
NUP85-208ENST00000578830 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
NUP85-208ENST00000578830 WDR62O43379 1518 aa16.99■□□□□ 0.31
NUP85-208ENST00000578830 CEP164Q9UPV0 1460 aa16.89■□□□□ 0.29
NUP85-208ENST00000578830 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
NUP85-208ENST00000578830 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
NUP85-208ENST00000578830 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
NUP85-208ENST00000578830 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
NUP85-208ENST00000578830 CFTRP13569 1480 aa16.8■□□□□ 0.28
NUP85-208ENST00000578830 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
NUP85-208ENST00000578830 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
NUP85-208ENST00000578830 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
NUP85-208ENST00000578830 OSCARQ8IYS5 282 aa16.71■□□□□ 0.27
NUP85-208ENST00000578830 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
NUP85-208ENST00000578830 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
NUP85-208ENST00000578830 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
NUP85-208ENST00000578830 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
NUP85-208ENST00000578830 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
NUP85-208ENST00000578830 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
NUP85-208ENST00000578830 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
NUP85-208ENST00000578830 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
NUP85-208ENST00000578830 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.23
NUP85-208ENST00000578830 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
NUP85-208ENST00000578830 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
NUP85-208ENST00000578830 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
NUP85-208ENST00000578830 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
NUP85-208ENST00000578830 CHD1O14646 1710 aa16.48■□□□□ 0.23
NUP85-208ENST00000578830 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
NUP85-208ENST00000578830 TARBP1Q13395 1621 aaKnown RBP16.42■□□□□ 0.22
NUP85-208ENST00000578830 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.217e-7■■■■□ 20.4
NUP85-208ENST00000578830 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
NUP85-208ENST00000578830 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
NUP85-208ENST00000578830 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
NUP85-208ENST00000578830 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
NUP85-208ENST00000578830 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
NUP85-208ENST00000578830 FBLN2P98095 1184 aa16.24■□□□□ 0.19
NUP85-208ENST00000578830 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
NUP85-208ENST00000578830 SOGA1O94964 1423 aa16.22■□□□□ 0.19
NUP85-208ENST00000578830 CLASP1Q7Z460 1538 aa16.21■□□□□ 0.19
NUP85-208ENST00000578830 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
NUP85-208ENST00000578830 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
NUP85-208ENST00000578830 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
NUP85-208ENST00000578830 SYNJ1O43426 1573 aa16.18■□□□□ 0.18
NUP85-208ENST00000578830 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
NUP85-208ENST00000578830 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
NUP85-208ENST00000578830 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
NUP85-208ENST00000578830 CUX1P39880 1505 aa16.14■□□□□ 0.18
NUP85-208ENST00000578830 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
NUP85-208ENST00000578830 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
NUP85-208ENST00000578830 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
NUP85-208ENST00000578830 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
NUP85-208ENST00000578830 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
NUP85-208ENST00000578830 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms