RNA–Protein interactions for RNA: ENST00000579557.5

NUP85-212, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-212ENST00000579557 NISCHQ9Y2I1 1504 aa23.36■■□□□ 1.33
NUP85-212ENST00000579557 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
NUP85-212ENST00000579557 ABCC9O60706 1549 aa20.22■□□□□ 0.83
NUP85-212ENST00000579557 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
NUP85-212ENST00000579557 NACADO15069 1562 aa19.41■□□□□ 0.7
NUP85-212ENST00000579557 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
NUP85-212ENST00000579557 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
NUP85-212ENST00000579557 DCAF1Q9Y4B6 1507 aa19.31■□□□□ 0.68
NUP85-212ENST00000579557 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
NUP85-212ENST00000579557 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
NUP85-212ENST00000579557 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
NUP85-212ENST00000579557 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.62
NUP85-212ENST00000579557 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
NUP85-212ENST00000579557 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
NUP85-212ENST00000579557 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
NUP85-212ENST00000579557 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
NUP85-212ENST00000579557 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
NUP85-212ENST00000579557 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
NUP85-212ENST00000579557 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
NUP85-212ENST00000579557 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
NUP85-212ENST00000579557 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
NUP85-212ENST00000579557 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
NUP85-212ENST00000579557 NCAPD3P42695 1498 aa17.99■□□□□ 0.47
NUP85-212ENST00000579557 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.46
NUP85-212ENST00000579557 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
NUP85-212ENST00000579557 HMGXB3Q12766 1538 aa17.86■□□□□ 0.45
NUP85-212ENST00000579557 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
NUP85-212ENST00000579557 WIZO95785 1651 aa17.8■□□□□ 0.44
NUP85-212ENST00000579557 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
NUP85-212ENST00000579557 TOP2AP11388 1531 aaKnown RBP17.59■□□□□ 0.41
NUP85-212ENST00000579557 NESP48681 1621 aa17.58■□□□□ 0.4
NUP85-212ENST00000579557 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
NUP85-212ENST00000579557 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
NUP85-212ENST00000579557 LAMC3Q9Y6N6 1575 aa17.41■□□□□ 0.38
NUP85-212ENST00000579557 CFTRP13569 1480 aa17.37■□□□□ 0.37
NUP85-212ENST00000579557 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
NUP85-212ENST00000579557 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
NUP85-212ENST00000579557 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
NUP85-212ENST00000579557 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
NUP85-212ENST00000579557 PDS5BQ9NTI5 1447 aa17.26■□□□□ 0.35
NUP85-212ENST00000579557 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
NUP85-212ENST00000579557 CUX2O14529 1486 aa17.16■□□□□ 0.34
NUP85-212ENST00000579557 MRC2Q9UBG0 1479 aa17.13■□□□□ 0.33
NUP85-212ENST00000579557 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
NUP85-212ENST00000579557 WDR62O43379 1518 aa17.13■□□□□ 0.33
NUP85-212ENST00000579557 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
NUP85-212ENST00000579557 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
NUP85-212ENST00000579557 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
NUP85-212ENST00000579557 DNMBPQ6XZF7 1577 aa16.92■□□□□ 0.3
NUP85-212ENST00000579557 CUX1P39880 1505 aa16.91■□□□□ 0.3
NUP85-212ENST00000579557 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
NUP85-212ENST00000579557 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
NUP85-212ENST00000579557 TARBP1Q13395 1621 aaKnown RBP16.83■□□□□ 0.28
NUP85-212ENST00000579557 ZNF608Q9ULD9 1512 aaPredicted RBP16.83■□□□□ 0.28
NUP85-212ENST00000579557 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
NUP85-212ENST00000579557 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
NUP85-212ENST00000579557 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
NUP85-212ENST00000579557 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
NUP85-212ENST00000579557 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
NUP85-212ENST00000579557 SOGA1O94964 1423 aa16.71■□□□□ 0.27
NUP85-212ENST00000579557 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
NUP85-212ENST00000579557 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
NUP85-212ENST00000579557 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.262e-7■■■■□ 21.7
NUP85-212ENST00000579557 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
NUP85-212ENST00000579557 WDR97A6NE52 1622 aa16.68■□□□□ 0.26
NUP85-212ENST00000579557 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
NUP85-212ENST00000579557 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
NUP85-212ENST00000579557 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
NUP85-212ENST00000579557 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
NUP85-212ENST00000579557 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.23
NUP85-212ENST00000579557 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
NUP85-212ENST00000579557 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
NUP85-212ENST00000579557 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
NUP85-212ENST00000579557 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
NUP85-212ENST00000579557 CHD1O14646 1710 aa16.45■□□□□ 0.22
NUP85-212ENST00000579557 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
NUP85-212ENST00000579557 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
NUP85-212ENST00000579557 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
NUP85-212ENST00000579557 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
NUP85-212ENST00000579557 IGF1RP08069 1367 aa16.39■□□□□ 0.21
NUP85-212ENST00000579557 ADAMTS12P58397 1594 aa16.39■□□□□ 0.21
NUP85-212ENST00000579557 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
NUP85-212ENST00000579557 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
NUP85-212ENST00000579557 FHAD1B1AJZ9 1412 aa16.33■□□□□ 0.2
NUP85-212ENST00000579557 FBLN2P98095 1184 aa16.32■□□□□ 0.2
NUP85-212ENST00000579557 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
NUP85-212ENST00000579557 KIF27Q86VH2 1401 aa16.32■□□□□ 0.2
NUP85-212ENST00000579557 NUP160Q12769 1436 aa16.3■□□□□ 0.2
NUP85-212ENST00000579557 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
NUP85-212ENST00000579557 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
NUP85-212ENST00000579557 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
NUP85-212ENST00000579557 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
NUP85-212ENST00000579557 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
NUP85-212ENST00000579557 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
NUP85-212ENST00000579557 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
NUP85-212ENST00000579557 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
NUP85-212ENST00000579557 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
NUP85-212ENST00000579557 CUL7Q14999 1698 aa16.2■□□□□ 0.18
NUP85-212ENST00000579557 ERCC6L2Q5T890 1561 aa16.19■□□□□ 0.18
NUP85-212ENST00000579557 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms