RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 NISCHQ9Y2I1 1504 aa17.28■□□□□ 0.36
SRSF6-201ENST00000244020 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
SRSF6-201ENST00000244020 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
SRSF6-201ENST00000244020 HRCP23327 699 aa15.37■□□□□ 0.05
SRSF6-201ENST00000244020 PCGF6Q9BYE7 350 aa15.27■□□□□ 0.03
SRSF6-201ENST00000244020 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
SRSF6-201ENST00000244020 CHIC1Q5VXU3 224 aa15.04■□□□□ -0
SRSF6-201ENST00000244020 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
SRSF6-201ENST00000244020 MYO15BQ96JP2 1530 aa14.93□□□□□ -0.02
SRSF6-201ENST00000244020 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
SRSF6-201ENST00000244020 PELP1Q8IZL8 1130 aaKnown RBP14.78□□□□□ -0.04
SRSF6-201ENST00000244020 TRIM26Q12899 539 aaPredicted RBP14.73□□□□□ -0.05
SRSF6-201ENST00000244020 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
SRSF6-201ENST00000244020 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
SRSF6-201ENST00000244020 ZEB1P37275 1124 aaPredicted RBP14.62□□□□□ -0.07
SRSF6-201ENST00000244020 MYT1Q01538 1121 aa14.5□□□□□ -0.09
SRSF6-201ENST00000244020 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.09
SRSF6-201ENST00000244020 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
SRSF6-201ENST00000244020 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
SRSF6-201ENST00000244020 CCDC180Q9P1Z9 1646 aa14.39□□□□□ -0.11
SRSF6-201ENST00000244020 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
SRSF6-201ENST00000244020 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
SRSF6-201ENST00000244020 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
SRSF6-201ENST00000244020 ACIN1Q9UKV3 1341 aaKnown RBP14.21□□□□□ -0.13
SRSF6-201ENST00000244020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
SRSF6-201ENST00000244020 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
SRSF6-201ENST00000244020 GTF3C3Q9Y5Q9 886 aa14.15□□□□□ -0.14
SRSF6-201ENST00000244020 DIEXFQ68CQ4 756 aaKnown RBP14.11□□□□□ -0.15
SRSF6-201ENST00000244020 TTBK1Q5TCY1 1321 aaPredicted RBP14.07□□□□□ -0.16
SRSF6-201ENST00000244020 ERICH6Q7L0X2 663 aa14.06□□□□□ -0.16
SRSF6-201ENST00000244020 YTHDC1Q96MU7 727 aaKnown RBP14□□□□□ -0.17
SRSF6-201ENST00000244020 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
SRSF6-201ENST00000244020 ABCC9O60706 1549 aa13.86□□□□□ -0.19
SRSF6-201ENST00000244020 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
SRSF6-201ENST00000244020 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
SRSF6-201ENST00000244020 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
SRSF6-201ENST00000244020 UBTFP17480 764 aaKnown RBP13.71□□□□□ -0.21
SRSF6-201ENST00000244020 MIER1Q8N108 512 aa13.7□□□□□ -0.22
SRSF6-201ENST00000244020 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
SRSF6-201ENST00000244020 APLP2Q06481 763 aa13.58□□□□□ -0.24
SRSF6-201ENST00000244020 CECR2Q9BXF3 1484 aa13.57□□□□□ -0.24
SRSF6-201ENST00000244020 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
SRSF6-201ENST00000244020 RANGAP1P46060 587 aaPredicted RBP13.51□□□□□ -0.25
SRSF6-201ENST00000244020 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
SRSF6-201ENST00000244020 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
SRSF6-201ENST00000244020 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
SRSF6-201ENST00000244020 NEFLP07196 543 aa13.48□□□□□ -0.25
SRSF6-201ENST00000244020 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.25
SRSF6-201ENST00000244020 WIZO95785 1651 aa13.44□□□□□ -0.26
SRSF6-201ENST00000244020 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
SRSF6-201ENST00000244020 SUPT16HQ9Y5B9 1047 aaKnown RBP13.42□□□□□ -0.26
SRSF6-201ENST00000244020 SOGA1O94964 1423 aa13.42□□□□□ -0.26
SRSF6-201ENST00000244020 CLSPNQ9HAW4 1339 aa13.41□□□□□ -0.26
SRSF6-201ENST00000244020 ABCC8Q09428 1581 aa13.4□□□□□ -0.26
SRSF6-201ENST00000244020 ANP32EQ9BTT0 268 aa13.34□□□□□ -0.27
SRSF6-201ENST00000244020 BCANQ96GW7 911 aa13.34□□□□□ -0.27
SRSF6-201ENST00000244020 EEA1Q15075 1411 aa13.32□□□□□ -0.28
SRSF6-201ENST00000244020 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
SRSF6-201ENST00000244020 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
SRSF6-201ENST00000244020 RUSC2Q8N2Y8 1516 aa13.29□□□□□ -0.28
SRSF6-201ENST00000244020 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
SRSF6-201ENST00000244020 CLIP1P30622 1438 aa13.27□□□□□ -0.29
SRSF6-201ENST00000244020 NACADO15069 1562 aa13.24□□□□□ -0.29
SRSF6-201ENST00000244020 ITGAEP38570 1179 aa13.24□□□□□ -0.29
SRSF6-201ENST00000244020 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
SRSF6-201ENST00000244020 FKBP8Q14318 412 aa13.22□□□□□ -0.29
SRSF6-201ENST00000244020 EIF5BO60841 1220 aaKnown RBP13.21□□□□□ -0.29
SRSF6-201ENST00000244020 RTL5Q5HYW3 569 aaPredicted RBP13.19□□□□□ -0.3
SRSF6-201ENST00000244020 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
SRSF6-201ENST00000244020 VPS8Q8N3P4 1428 aa13.17□□□□□ -0.3
SRSF6-201ENST00000244020 TOP2AP11388 1531 aaKnown RBP13.17□□□□□ -0.3
SRSF6-201ENST00000244020 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
SRSF6-201ENST00000244020 KCNH8Q96L42 1107 aa13.14□□□□□ -0.31
SRSF6-201ENST00000244020 DHX57Q6P158 1386 aaKnown RBP13.13□□□□□ -0.31
SRSF6-201ENST00000244020 DDX10Q13206 875 aaKnown RBP13.11□□□□□ -0.31
SRSF6-201ENST00000244020 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
SRSF6-201ENST00000244020 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.325e-10■■■■□ 24.6
SRSF6-201ENST00000244020 RBM19Q9Y4C8 960 aaKnown RBP13.07□□□□□ -0.32
SRSF6-201ENST00000244020 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
SRSF6-201ENST00000244020 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
SRSF6-201ENST00000244020 KANK4Q5T7N3 995 aaPredicted RBP13.05□□□□□ -0.32
SRSF6-201ENST00000244020 RAPGEF2Q9Y4G8 1499 aa13.03□□□□□ -0.32
SRSF6-201ENST00000244020 SMARCA4P51532 1647 aa13.03□□□□□ -0.32
SRSF6-201ENST00000244020 ANP32CO43423 234 aa13.02□□□□□ -0.33
SRSF6-201ENST00000244020 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
SRSF6-201ENST00000244020 KIF21BO75037 1637 aa12.98□□□□□ -0.33
SRSF6-201ENST00000244020 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
SRSF6-201ENST00000244020 CDK11AQ9UQ88 783 aaPredicted RBP12.96□□□□□ -0.33
SRSF6-201ENST00000244020 FAM50AQ14320 339 aaKnown RBP12.95□□□□□ -0.34
SRSF6-201ENST00000244020 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
SRSF6-201ENST00000244020 CCNB3Q8WWL7 1395 aa12.95□□□□□ -0.34
SRSF6-201ENST00000244020 SIN3AQ96ST3 1273 aa12.94□□□□□ -0.34
SRSF6-201ENST00000244020 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
SRSF6-201ENST00000244020 IRX6P78412 446 aaPredicted RBP12.91□□□□□ -0.34
SRSF6-201ENST00000244020 RAB3GAP2Q9H2M9 1393 aa12.9□□□□□ -0.34
SRSF6-201ENST00000244020 CNGB1Q14028 1251 aaPredicted RBP12.89□□□□□ -0.35
SRSF6-201ENST00000244020 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.353e-10■■□□□ 12.6
SRSF6-201ENST00000244020 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
SRSF6-201ENST00000244020 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
SRSF6-201ENST00000244020 PPP1R15AO75807 674 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms