RNA–Protein interactions for RNA: ENST00000566044.5

PHKB-208, Transcript of phosphorylase kinase regulatory subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHKB, Length 3,829 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKB-208ENST00000566044 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
PHKB-208ENST00000566044 CCDC180Q9P1Z9 1646 aa22.98■■□□□ 1.27
PHKB-208ENST00000566044 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
PHKB-208ENST00000566044 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
PHKB-208ENST00000566044 MYO15BQ96JP2 1530 aa22.39■■□□□ 1.17
PHKB-208ENST00000566044 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
PHKB-208ENST00000566044 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
PHKB-208ENST00000566044 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
PHKB-208ENST00000566044 ABCC9O60706 1549 aa21.74■■□□□ 1.07
PHKB-208ENST00000566044 HRCP23327 699 aa21.51■■□□□ 1.03
PHKB-208ENST00000566044 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
PHKB-208ENST00000566044 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
PHKB-208ENST00000566044 SCRIBQ14160 1630 aa21.29■■□□□ 1
PHKB-208ENST00000566044 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
PHKB-208ENST00000566044 LOC105371045A0A1W2PR82 267 aa21.16■□□□□ 0.98
PHKB-208ENST00000566044 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
PHKB-208ENST00000566044 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
PHKB-208ENST00000566044 DCAF8L2P0C7V8 631 aa21.09■□□□□ 0.97
PHKB-208ENST00000566044 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
PHKB-208ENST00000566044 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
PHKB-208ENST00000566044 WIZO95785 1651 aa20.97■□□□□ 0.95
PHKB-208ENST00000566044 NACADO15069 1562 aa20.91■□□□□ 0.94
PHKB-208ENST00000566044 UNC13AQ9UPW8 1703 aa20.88■□□□□ 0.93
PHKB-208ENST00000566044 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
PHKB-208ENST00000566044 TRIM26Q12899 539 aaPredicted RBP20.71■□□□□ 0.91
PHKB-208ENST00000566044 SMARCA4P51532 1647 aa20.53■□□□□ 0.88
PHKB-208ENST00000566044 SMARCA2P51531 1590 aa20.52■□□□□ 0.88
PHKB-208ENST00000566044 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
PHKB-208ENST00000566044 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
PHKB-208ENST00000566044 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
PHKB-208ENST00000566044 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
PHKB-208ENST00000566044 BICRAQ9NZM4 1560 aa20.36■□□□□ 0.85
PHKB-208ENST00000566044 PEG3Q9GZU2 1588 aa20.32■□□□□ 0.84
PHKB-208ENST00000566044 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
PHKB-208ENST00000566044 RUSC2Q8N2Y8 1516 aa20.21■□□□□ 0.83
PHKB-208ENST00000566044 FAM9AQ8IZU1 332 aaPredicted RBP20.18■□□□□ 0.82
PHKB-208ENST00000566044 SOGA1O94964 1423 aa20.16■□□□□ 0.82
PHKB-208ENST00000566044 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
PHKB-208ENST00000566044 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
PHKB-208ENST00000566044 ZEB1P37275 1124 aaPredicted RBP20.08■□□□□ 0.81
PHKB-208ENST00000566044 CEP162Q5TB80 1403 aa20.03■□□□□ 0.8
PHKB-208ENST00000566044 KIF21BO75037 1637 aa20.01■□□□□ 0.79
PHKB-208ENST00000566044 TNIKQ9UKE5 1360 aa19.97■□□□□ 0.79
PHKB-208ENST00000566044 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
PHKB-208ENST00000566044 EEA1Q15075 1411 aa19.86■□□□□ 0.77
PHKB-208ENST00000566044 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
PHKB-208ENST00000566044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.83■□□□□ 0.77
PHKB-208ENST00000566044 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
PHKB-208ENST00000566044 GOLGA3Q08378 1498 aa19.78■□□□□ 0.76
PHKB-208ENST00000566044 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
PHKB-208ENST00000566044 BAZ1BQ9UIG0 1483 aaKnown RBP19.68■□□□□ 0.74
PHKB-208ENST00000566044 RAPGEF2Q9Y4G8 1499 aa19.67■□□□□ 0.74
PHKB-208ENST00000566044 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
PHKB-208ENST00000566044 NEUROD1Q13562 356 aa19.65■□□□□ 0.74
PHKB-208ENST00000566044 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
PHKB-208ENST00000566044 CLIP1P30622 1438 aa19.63■□□□□ 0.73
PHKB-208ENST00000566044 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
PHKB-208ENST00000566044 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
PHKB-208ENST00000566044 VPS8Q8N3P4 1428 aa19.57■□□□□ 0.72
PHKB-208ENST00000566044 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
PHKB-208ENST00000566044 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
PHKB-208ENST00000566044 ERICH3Q5RHP9 1530 aa19.55■□□□□ 0.72
PHKB-208ENST00000566044 CUX1P39880 1505 aa19.52■□□□□ 0.71
PHKB-208ENST00000566044 CCER1Q8TC90 406 aaPredicted RBP19.49■□□□□ 0.71
PHKB-208ENST00000566044 HMGXB3Q12766 1538 aa19.48■□□□□ 0.71
PHKB-208ENST00000566044 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
PHKB-208ENST00000566044 DIEXFQ68CQ4 756 aaKnown RBP19.44■□□□□ 0.7
PHKB-208ENST00000566044 CUX2O14529 1486 aa19.43■□□□□ 0.7
PHKB-208ENST00000566044 NCAPD3P42695 1498 aa19.34■□□□□ 0.69
PHKB-208ENST00000566044 TTBK1Q5TCY1 1321 aaPredicted RBP19.33■□□□□ 0.68
PHKB-208ENST00000566044 RRBP1Q9P2E9 1410 aaKnown RBP19.32■□□□□ 0.68
PHKB-208ENST00000566044 CFTRP13569 1480 aa19.29■□□□□ 0.68
PHKB-208ENST00000566044 ZNF316A6NFI3 1004 aaPredicted RBP19.29■□□□□ 0.68
PHKB-208ENST00000566044 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
PHKB-208ENST00000566044 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.68
PHKB-208ENST00000566044 PELP1Q8IZL8 1130 aaKnown RBP19.27■□□□□ 0.67
PHKB-208ENST00000566044 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
PHKB-208ENST00000566044 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
PHKB-208ENST00000566044 MAPKBP1O60336 1514 aa19.24■□□□□ 0.67
PHKB-208ENST00000566044 MIER1Q8N108 512 aa19.2■□□□□ 0.66
PHKB-208ENST00000566044 CFAP43Q8NDM7 1665 aa19.19■□□□□ 0.66
PHKB-208ENST00000566044 KANK4Q5T7N3 995 aaPredicted RBP19.19■□□□□ 0.66
PHKB-208ENST00000566044 LRRIQ1Q96JM4 1722 aa19.19■□□□□ 0.66
PHKB-208ENST00000566044 MAP3K1Q13233 1512 aa19.13■□□□□ 0.65
PHKB-208ENST00000566044 TIAM1Q13009 1591 aa19.13■□□□□ 0.65
PHKB-208ENST00000566044 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
PHKB-208ENST00000566044 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
PHKB-208ENST00000566044 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
PHKB-208ENST00000566044 PCF11O94913 1555 aaKnown RBP19.01■□□□□ 0.63
PHKB-208ENST00000566044 IGF1RP08069 1367 aa19■□□□□ 0.63
PHKB-208ENST00000566044 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
PHKB-208ENST00000566044 CTTNBP2Q8WZ74 1663 aa18.96■□□□□ 0.63
PHKB-208ENST00000566044 LRRC9Q6ZRR7 1453 aa18.93■□□□□ 0.62
PHKB-208ENST00000566044 KDM5BQ9UGL1 1544 aa18.93■□□□□ 0.62
PHKB-208ENST00000566044 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
PHKB-208ENST00000566044 CENPBP07199 599 aaPredicted RBP18.91■□□□□ 0.62
PHKB-208ENST00000566044 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
PHKB-208ENST00000566044 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
PHKB-208ENST00000566044 SAMD9Q5K651 1589 aa18.84■□□□□ 0.61
PHKB-208ENST00000566044 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms