RNA–Protein interactions for RNA: ENST00000493622.5

PHGDH-206, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 742 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-206ENST00000493622 NISCHQ9Y2I1 1504 aa20.26■□□□□ 0.83
PHGDH-206ENST00000493622 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
PHGDH-206ENST00000493622 ZCCHC6Q5VYS8 1495 aaKnown RBP17.1■□□□□ 0.33
PHGDH-206ENST00000493622 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
PHGDH-206ENST00000493622 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-206ENST00000493622 MYO15BQ96JP2 1530 aa16.52■□□□□ 0.24
PHGDH-206ENST00000493622 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
PHGDH-206ENST00000493622 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
PHGDH-206ENST00000493622 ABCC9O60706 1549 aa16.35■□□□□ 0.21
PHGDH-206ENST00000493622 NACADO15069 1562 aa16.31■□□□□ 0.2
PHGDH-206ENST00000493622 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
PHGDH-206ENST00000493622 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
PHGDH-206ENST00000493622 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
PHGDH-206ENST00000493622 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
PHGDH-206ENST00000493622 SUPT5HO00267 1087 aaKnown RBP15.92■□□□□ 0.14
PHGDH-206ENST00000493622 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
PHGDH-206ENST00000493622 BICRAQ9NZM4 1560 aa15.72■□□□□ 0.11
PHGDH-206ENST00000493622 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
PHGDH-206ENST00000493622 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
PHGDH-206ENST00000493622 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-206ENST00000493622 WIZO95785 1651 aa15.58■□□□□ 0.08
PHGDH-206ENST00000493622 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
PHGDH-206ENST00000493622 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
PHGDH-206ENST00000493622 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
PHGDH-206ENST00000493622 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
PHGDH-206ENST00000493622 EIF4G1Q04637 1599 aaKnown RBP15.37■□□□□ 0.05
PHGDH-206ENST00000493622 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
PHGDH-206ENST00000493622 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
PHGDH-206ENST00000493622 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
PHGDH-206ENST00000493622 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
PHGDH-206ENST00000493622 HMGXB3Q12766 1538 aa15.08■□□□□ 0.01
PHGDH-206ENST00000493622 NCAPD3P42695 1498 aa15.03■□□□□ -0
PHGDH-206ENST00000493622 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
PHGDH-206ENST00000493622 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
PHGDH-206ENST00000493622 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
PHGDH-206ENST00000493622 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
PHGDH-206ENST00000493622 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
PHGDH-206ENST00000493622 LOC105371045A0A1W2PR82 267 aa14.82□□□□□ -0.04
PHGDH-206ENST00000493622 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
PHGDH-206ENST00000493622 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
PHGDH-206ENST00000493622 CFTRP13569 1480 aa14.76□□□□□ -0.05
PHGDH-206ENST00000493622 TOP2BQ02880 1626 aa14.74□□□□□ -0.05
PHGDH-206ENST00000493622 EEA1Q15075 1411 aa14.69□□□□□ -0.06
PHGDH-206ENST00000493622 SOGA1O94964 1423 aa14.68□□□□□ -0.06
PHGDH-206ENST00000493622 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-206ENST00000493622 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
PHGDH-206ENST00000493622 CUX1P39880 1505 aa14.64□□□□□ -0.07
PHGDH-206ENST00000493622 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
PHGDH-206ENST00000493622 KIF21BO75037 1637 aa14.59□□□□□ -0.07
PHGDH-206ENST00000493622 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
PHGDH-206ENST00000493622 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
PHGDH-206ENST00000493622 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
PHGDH-206ENST00000493622 TNIKQ9UKE5 1360 aa14.48□□□□□ -0.09
PHGDH-206ENST00000493622 CEP164Q9UPV0 1460 aa14.48□□□□□ -0.09
PHGDH-206ENST00000493622 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
PHGDH-206ENST00000493622 NESP48681 1621 aa14.47□□□□□ -0.09
PHGDH-206ENST00000493622 DNMBPQ6XZF7 1577 aa14.45□□□□□ -0.1
PHGDH-206ENST00000493622 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
PHGDH-206ENST00000493622 CEP162Q5TB80 1403 aa14.42□□□□□ -0.1
PHGDH-206ENST00000493622 PRXQ9BXM0 1461 aa14.42□□□□□ -0.1
PHGDH-206ENST00000493622 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
PHGDH-206ENST00000493622 FGD5Q6ZNL6 1462 aa14.41□□□□□ -0.1
PHGDH-206ENST00000493622 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
PHGDH-206ENST00000493622 RAPGEF2Q9Y4G8 1499 aa14.4□□□□□ -0.1
PHGDH-206ENST00000493622 WDR97A6NE52 1622 aa14.38□□□□□ -0.11
PHGDH-206ENST00000493622 TOPBP1Q92547 1522 aa14.38□□□□□ -0.11
PHGDH-206ENST00000493622 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
PHGDH-206ENST00000493622 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
PHGDH-206ENST00000493622 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
PHGDH-206ENST00000493622 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-206ENST00000493622 CUX2O14529 1486 aa14.31□□□□□ -0.12
PHGDH-206ENST00000493622 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
PHGDH-206ENST00000493622 PCGF6Q9BYE7 350 aa14.3□□□□□ -0.12
PHGDH-206ENST00000493622 TRIM26Q12899 539 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-206ENST00000493622 PDS5BQ9NTI5 1447 aa14.28□□□□□ -0.12
PHGDH-206ENST00000493622 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
PHGDH-206ENST00000493622 ABCA5Q8WWZ7 1642 aa14.25□□□□□ -0.13
PHGDH-206ENST00000493622 RAD54L2Q9Y4B4 1467 aa14.25□□□□□ -0.13
PHGDH-206ENST00000493622 CLIP1P30622 1438 aa14.24□□□□□ -0.13
PHGDH-206ENST00000493622 IGF1RP08069 1367 aa14.24□□□□□ -0.13
PHGDH-206ENST00000493622 CUL7Q14999 1698 aa14.22□□□□□ -0.13
PHGDH-206ENST00000493622 TARBP1Q13395 1621 aaKnown RBP14.22□□□□□ -0.13
PHGDH-206ENST00000493622 VPS8Q8N3P4 1428 aa14.19□□□□□ -0.14
PHGDH-206ENST00000493622 PHF23Q9BUL5 403 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-206ENST00000493622 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
PHGDH-206ENST00000493622 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
PHGDH-206ENST00000493622 CARMIL1Q5VZK9 1371 aa14.15□□□□□ -0.14
PHGDH-206ENST00000493622 WDR62O43379 1518 aa14.15□□□□□ -0.14
PHGDH-206ENST00000493622 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
PHGDH-206ENST00000493622 HRCP23327 699 aa14.13□□□□□ -0.15
PHGDH-206ENST00000493622 PBRM1Q86U86 1689 aa14.13□□□□□ -0.15
PHGDH-206ENST00000493622 ARHGAP35Q9NRY4 1499 aa14.12□□□□□ -0.15
PHGDH-206ENST00000493622 THOC2Q8NI27 1593 aaKnown RBP14.1□□□□□ -0.15
PHGDH-206ENST00000493622 GAPVD1Q14C86 1478 aa14.07□□□□□ -0.16
PHGDH-206ENST00000493622 PPARGC1BQ86YN6 1023 aaKnown RBP14.05□□□□□ -0.16
PHGDH-206ENST00000493622 ADAMTS12P58397 1594 aa14.03□□□□□ -0.16
PHGDH-206ENST00000493622 TDRD9Q8NDG6 1382 aaKnown RBP14.02□□□□□ -0.17
PHGDH-206ENST00000493622 EFCAB5A4FU69 1503 aa14□□□□□ -0.17
PHGDH-206ENST00000493622 IFT140Q96RY7 1462 aa14□□□□□ -0.17
PHGDH-206ENST00000493622 SAMD9Q5K651 1589 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms