RNA–Protein interactions for RNA: ENST00000299167.12

PHKB-201, Transcript of phosphorylase kinase regulatory subunit beta, humanhuman

TSL 5 BASIC

Gene PHKB, Length 5,464 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKB-201ENST00000299167 NISCHQ9Y2I1 1504 aa16.46■□□□□ 0.23
PHKB-201ENST00000299167 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
PHKB-201ENST00000299167 ZCCHC6Q5VYS8 1495 aaKnown RBP13.94□□□□□ -0.18
PHKB-201ENST00000299167 DCAF1Q9Y4B6 1507 aa13.77□□□□□ -0.21
PHKB-201ENST00000299167 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
PHKB-201ENST00000299167 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
PHKB-201ENST00000299167 NACADO15069 1562 aa13.25□□□□□ -0.29
PHKB-201ENST00000299167 ABCC9O60706 1549 aa13.14□□□□□ -0.31
PHKB-201ENST00000299167 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
PHKB-201ENST00000299167 SCRIBQ14160 1630 aa13.06□□□□□ -0.32
PHKB-201ENST00000299167 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
PHKB-201ENST00000299167 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
PHKB-201ENST00000299167 MYT1Q01538 1121 aa12.88□□□□□ -0.35
PHKB-201ENST00000299167 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
PHKB-201ENST00000299167 CECR2Q9BXF3 1484 aa12.79□□□□□ -0.36
PHKB-201ENST00000299167 EIF4G1Q04637 1599 aaKnown RBP12.78□□□□□ -0.36
PHKB-201ENST00000299167 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
PHKB-201ENST00000299167 PEG3Q9GZU2 1588 aa12.75□□□□□ -0.37
PHKB-201ENST00000299167 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
PHKB-201ENST00000299167 WIZO95785 1651 aa12.72□□□□□ -0.37
PHKB-201ENST00000299167 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
PHKB-201ENST00000299167 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
PHKB-201ENST00000299167 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.41
PHKB-201ENST00000299167 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
PHKB-201ENST00000299167 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
PHKB-201ENST00000299167 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
PHKB-201ENST00000299167 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
PHKB-201ENST00000299167 PRDM2Q13029 1718 aa12.31□□□□□ -0.44
PHKB-201ENST00000299167 CCDC88BA6NC98 1476 aa12.29□□□□□ -0.44
PHKB-201ENST00000299167 NCAPD3P42695 1498 aa12.24□□□□□ -0.45
PHKB-201ENST00000299167 SUPT5HO00267 1087 aaKnown RBP12.23□□□□□ -0.45
PHKB-201ENST00000299167 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
PHKB-201ENST00000299167 CC2D2AQ9P2K1 1620 aa12.2□□□□□ -0.46
PHKB-201ENST00000299167 CHIC1Q5VXU3 224 aa12.14□□□□□ -0.47
PHKB-201ENST00000299167 BIVM-ERCC5R4GMW8 1640 aa12.1□□□□□ -0.47
PHKB-201ENST00000299167 SYNJ1O43426 1573 aa12.08□□□□□ -0.48
PHKB-201ENST00000299167 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
PHKB-201ENST00000299167 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
PHKB-201ENST00000299167 CFTRP13569 1480 aa12.01□□□□□ -0.49
PHKB-201ENST00000299167 TOP2BQ02880 1626 aa11.99□□□□□ -0.49
PHKB-201ENST00000299167 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
PHKB-201ENST00000299167 WDR97A6NE52 1622 aa11.96□□□□□ -0.5
PHKB-201ENST00000299167 CUX1P39880 1505 aa11.92□□□□□ -0.5
PHKB-201ENST00000299167 DNAJC5BQ9UF47 199 aa11.9□□□□□ -0.5
PHKB-201ENST00000299167 KIF21AQ7Z4S6 1674 aa11.87□□□□□ -0.51
PHKB-201ENST00000299167 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
PHKB-201ENST00000299167 LAMC3Q9Y6N6 1575 aa11.81□□□□□ -0.52
PHKB-201ENST00000299167 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
PHKB-201ENST00000299167 NESP48681 1621 aa11.79□□□□□ -0.52
PHKB-201ENST00000299167 SOGA1O94964 1423 aa11.77□□□□□ -0.53
PHKB-201ENST00000299167 KIF21BO75037 1637 aa11.76□□□□□ -0.53
PHKB-201ENST00000299167 WRNQ14191 1432 aaPredicted RBP eCLIP11.75□□□□□ -0.53
PHKB-201ENST00000299167 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
PHKB-201ENST00000299167 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
PHKB-201ENST00000299167 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
PHKB-201ENST00000299167 URB2Q14146 1524 aaKnown RBP11.72□□□□□ -0.53
PHKB-201ENST00000299167 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.54
PHKB-201ENST00000299167 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
PHKB-201ENST00000299167 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
PHKB-201ENST00000299167 HRCP23327 699 aa11.69□□□□□ -0.54
PHKB-201ENST00000299167 PRXQ9BXM0 1461 aa11.65□□□□□ -0.54
PHKB-201ENST00000299167 TOPBP1Q92547 1522 aa11.64□□□□□ -0.55
PHKB-201ENST00000299167 FANCD2Q9BXW9 1451 aa11.64□□□□□ -0.55
PHKB-201ENST00000299167 WDR62O43379 1518 aa11.61□□□□□ -0.55
PHKB-201ENST00000299167 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
PHKB-201ENST00000299167 POLA1P09884 1462 aaPredicted RBP11.59□□□□□ -0.55
PHKB-201ENST00000299167 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
PHKB-201ENST00000299167 CUX2O14529 1486 aa11.59□□□□□ -0.55
PHKB-201ENST00000299167 FGD5Q6ZNL6 1462 aa11.59□□□□□ -0.55
PHKB-201ENST00000299167 ERICH6Q7L0X2 663 aa11.59□□□□□ -0.55
PHKB-201ENST00000299167 LOC105371045A0A1W2PR82 267 aa11.58□□□□□ -0.56
PHKB-201ENST00000299167 PBRM1Q86U86 1689 aa11.58□□□□□ -0.56
PHKB-201ENST00000299167 LRRIQ1Q96JM4 1722 aa11.57□□□□□ -0.56
PHKB-201ENST00000299167 PCGF6Q9BYE7 350 aa11.56□□□□□ -0.56
PHKB-201ENST00000299167 EEA1Q15075 1411 aa11.56□□□□□ -0.56
PHKB-201ENST00000299167 RAPGEF2Q9Y4G8 1499 aa11.53□□□□□ -0.56
PHKB-201ENST00000299167 CTTNBP2Q8WZ74 1663 aa11.5□□□□□ -0.57
PHKB-201ENST00000299167 CCER1Q8TC90 406 aaPredicted RBP11.5□□□□□ -0.57
PHKB-201ENST00000299167 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
PHKB-201ENST00000299167 RAD54L2Q9Y4B4 1467 aa11.48□□□□□ -0.57
PHKB-201ENST00000299167 CUL7Q14999 1698 aa11.48□□□□□ -0.57
PHKB-201ENST00000299167 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
PHKB-201ENST00000299167 IGF1RP08069 1367 aa11.45□□□□□ -0.58
PHKB-201ENST00000299167 TNIKQ9UKE5 1360 aa11.44□□□□□ -0.58
PHKB-201ENST00000299167 SAMD9Q5K651 1589 aa11.43□□□□□ -0.58
PHKB-201ENST00000299167 ARAP1Q96P48 1450 aa11.42□□□□□ -0.58
PHKB-201ENST00000299167 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
PHKB-201ENST00000299167 ADAMTS12P58397 1594 aa11.41□□□□□ -0.58
PHKB-201ENST00000299167 GOLGA3Q08378 1498 aa11.41□□□□□ -0.58
PHKB-201ENST00000299167 MRC2Q9UBG0 1479 aa11.41□□□□□ -0.58
PHKB-201ENST00000299167 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
PHKB-201ENST00000299167 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
PHKB-201ENST00000299167 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
PHKB-201ENST00000299167 ARHGAP35Q9NRY4 1499 aa11.34□□□□□ -0.59
PHKB-201ENST00000299167 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
PHKB-201ENST00000299167 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
PHKB-201ENST00000299167 CFAP43Q8NDM7 1665 aa11.32□□□□□ -0.6
PHKB-201ENST00000299167 CEP170Q5SW79 1584 aa11.27□□□□□ -0.61
PHKB-201ENST00000299167 SNAPC4Q5SXM2 1469 aa11.27□□□□□ -0.61
PHKB-201ENST00000299167 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms