Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC38.79■■■■□ 3.81e-7■■■□□ 15
PABPN1Q86U42 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC38.47■■■■□ 3.751e-7■■■□□ 15
PABPN1Q86U42 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC37.98■■■■□ 3.671e-7■■■□□ 15
PABPN1Q86U42 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.151e-7■■■□□ 15
PABPN1Q86U42 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC34.74■■■■□ 3.151e-7■■■□□ 15
PABPN1Q86U42 EEF1D-206ENST00000524397 957 ntTSL 334.7■■■■□ 3.151e-7■■■□□ 15
PABPN1Q86U42 EEF1D-224ENST00000529007 861 ntTSL 234.7■■■■□ 3.151e-7■■■□□ 15
PABPN1Q86U42 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC34.53■■■■□ 3.121e-7■■■□□ 15
PABPN1Q86U42 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC33.74■■■□□ 2.991e-7■■■□□ 15
PABPN1Q86U42 EEF1D-250ENST00000533833 831 ntTSL 533.59■■■□□ 2.971e-7■■■□□ 15
PABPN1Q86U42 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.891e-7■■■□□ 15
PABPN1Q86U42 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.491e-7■■■□□ 15
PABPN1Q86U42 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.261e-7■■■□□ 15
PABPN1Q86U42 EEF1D-253ENST00000534380 1001 ntTSL 527.58■■■□□ 2.011e-7■■■□□ 15
PABPN1Q86U42 TPM2-205ENST00000471212 1363 ntTSL 234.68■■■■□ 3.145e-7■■■□□ 15
PABPN1Q86U42 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC29.17■■■□□ 2.265e-7■■■□□ 15
PABPN1Q86U42 CFB-277ENST00000467360 1082 ntTSL 514.32□□□□□ -0.124e-13■■■□□ 14.9
PABPN1Q86U42 PSME2-209ENST00000559453 1721 ntTSL 515.06■□□□□ 01e-8■■■□□ 14.9
PABPN1Q86U42 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.852e-9■■■□□ 14.9
PABPN1Q86U42 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.49e-7■■■□□ 14.9
PABPN1Q86U42 COL9A3-203ENST00000462700 1237 ntTSL 337.55■■■■□ 3.67e-12■■■□□ 14.9
PABPN1Q86U42 SSBP4-211ENST00000601614 628 ntTSL 235.05■■■■□ 3.24e-9■■■□□ 14.9
PABPN1Q86U42 UNC13D-206ENST00000586519 403 ntTSL 533.02■■■□□ 2.889e-7■■■□□ 14.9
PABPN1Q86U42 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.049e-7■■■□□ 14.9
PABPN1Q86U42 GABRE-208ENST00000483564 2747 ntTSL 313.7□□□□□ -0.229e-7■■■□□ 14.9
PABPN1Q86U42 GABRE-209ENST00000486255 6176 ntTSL 1 (best)12.39□□□□□ -0.439e-7■■■□□ 14.9
PABPN1Q86U42 MLXIPL-209ENST00000467221 774 ntTSL 521.58■■□□□ 1.052e-12■■■□□ 14.9
PABPN1Q86U42 ACSS2-221ENST00000493250 693 ntTSL 227.44■■□□□ 1.981e-10■■■□□ 14.9
PABPN1Q86U42 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.054e-7■■■□□ 14.9
PABPN1Q86U42 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.854e-7■■■□□ 14.9
PABPN1Q86U42 EEF1D-252ENST00000534377 617 ntTSL 229.93■■■□□ 2.381e-7■■■□□ 14.9
PABPN1Q86U42 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.42e-7■■■□□ 14.9
PABPN1Q86U42 GSDMB-205ENST00000418519 1597 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.052e-7■■■□□ 14.9
PABPN1Q86U42 GSDMB-212ENST00000520542 1546 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.972e-7■■■□□ 14.9
PABPN1Q86U42 GSDMB-203ENST00000394175 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.812e-7■■■□□ 14.9
PABPN1Q86U42 GSDMB-204ENST00000394179 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.632e-7■■■□□ 14.9
PABPN1Q86U42 GSDMB-208ENST00000477054 4655 ntTSL 514.51□□□□□ -0.092e-7■■■□□ 14.9
PABPN1Q86U42 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.282e-7■■■□□ 14.9
PABPN1Q86U42 OBSL1-206ENST00000462385 951 ntTSL 227.57■■■□□ 22e-13■■■□□ 14.9
PABPN1Q86U42 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.483e-7■■■□□ 14.9
PABPN1Q86U42 LLGL2-211ENST00000578638 2367 ntTSL 228.61■■■□□ 2.173e-7■■■□□ 14.9
PABPN1Q86U42 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC28.17■■■□□ 2.13e-7■■■□□ 14.9
PABPN1Q86U42 LLGL2-207ENST00000577500 2971 ntTSL 220.57■□□□□ 0.883e-7■■■□□ 14.9
PABPN1Q86U42 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.73e-7■■■□□ 14.9
PABPN1Q86U42 LLGL2-204ENST00000545227 3527 ntTSL 218.4■□□□□ 0.543e-7■■■□□ 14.9
PABPN1Q86U42 EEF1D-229ENST00000530109 533 ntTSL 230.97■■■□□ 2.552e-7■■■□□ 14.8
PABPN1Q86U42 EPS8L2-220ENST00000531393 2304 ntTSL 1 (best)32.49■■■□□ 2.796e-12■■■□□ 14.8
PABPN1Q86U42 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC49.1■■■■■ 5.454e-8■■■□□ 14.8
PABPN1Q86U42 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC43.76■■■■■ 4.64e-8■■■□□ 14.8
PABPN1Q86U42 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC22.37■■□□□ 1.174e-8■■■□□ 14.8
PABPN1Q86U42 MIB2-218ENST00000505370 809 ntTSL 249.36■■■■■ 5.492e-7■■■□□ 14.8
PABPN1Q86U42 NSUN5P1-202ENST00000421140 1535 ntBASIC35.73■■■■□ 3.312e-7■■■□□ 14.8
PABPN1Q86U42 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC29.01■■■□□ 2.242e-7■■■□□ 14.8
PABPN1Q86U42 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC28.87■■■□□ 2.212e-7■■■□□ 14.8
PABPN1Q86U42 NSUN5P1-201ENST00000393633 4792 ntTSL 227.46■■□□□ 1.992e-7■■■□□ 14.8
PABPN1Q86U42 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC27.18■■□□□ 1.942e-7■■■□□ 14.8
PABPN1Q86U42 SARS-202ENST00000369923 1882 ntTSL 5 BASIC26.34■■□□□ 1.812e-7■■■□□ 14.8
PABPN1Q86U42 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.392e-7■■■□□ 14.8
PABPN1Q86U42 MED24-228ENST00000581058 524 ntTSL 417.48■□□□□ 0.395e-7■■■□□ 14.8
PABPN1Q86U42 SARS-203ENST00000468588 1582 ntTSL 210.86□□□□□ -0.672e-7■■■□□ 14.8
PABPN1Q86U42 RBM6-208ENST00000438912 473 ntTSL 511.63□□□□□ -0.553e-13■■■□□ 14.8
PABPN1Q86U42 SYMPK-202ENST00000593504 5107 ntTSL 223.29■■□□□ 1.321e-6■■■□□ 14.8
PABPN1Q86U42 SYMPK-215ENST00000600237 5164 ntTSL 521.24■□□□□ 0.991e-6■■■□□ 14.8
PABPN1Q86U42 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.771e-6■■■□□ 14.8
PABPN1Q86U42 CS-219ENST00000550655 589 ntTSL 235.72■■■■□ 3.312e-8■■■□□ 14.8
PABPN1Q86U42 CAPN15-203ENST00000565010 1952 ntTSL 1 (best)32.07■■■□□ 2.722e-6■■■□□ 14.8
PABPN1Q86U42 CS-230ENST00000551968 542 ntTSL 430.6■■■□□ 2.492e-8■■■□□ 14.8
PABPN1Q86U42 CS-229ENST00000551936 744 ntTSL 329.89■■■□□ 2.382e-8■■■□□ 14.8
PABPN1Q86U42 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.192e-6■■■□□ 14.8
PABPN1Q86U42 CS-228ENST00000551473 797 ntTSL 325.82■■□□□ 1.722e-8■■■□□ 14.8
PABPN1Q86U42 CS-208ENST00000547298 656 ntTSL 325.52■■□□□ 1.682e-8■■■□□ 14.8
PABPN1Q86U42 CS-221ENST00000550734 747 ntTSL 524.49■■□□□ 1.512e-8■■■□□ 14.8
PABPN1Q86U42 CS-223ENST00000551137 903 ntTSL 323.3■■□□□ 1.322e-8■■■□□ 14.8
PABPN1Q86U42 CS-225ENST00000551253 676 ntTSL 317.17■□□□□ 0.342e-8■■■□□ 14.8
PABPN1Q86U42 CS-209ENST00000547449 434 ntTSL 217.02■□□□□ 0.322e-8■■■□□ 14.8
PABPN1Q86U42 CS-211ENST00000548041 561 ntTSL 416.97■□□□□ 0.312e-8■■■□□ 14.8
PABPN1Q86U42 CS-206ENST00000546930 568 ntTSL 416.1■□□□□ 0.172e-8■■■□□ 14.8
PABPN1Q86U42 CS-216ENST00000549221 553 ntTSL 415.27■□□□□ 0.042e-8■■■□□ 14.8
PABPN1Q86U42 CS-233ENST00000552688 580 ntTSL 414.59□□□□□ -0.072e-8■■■□□ 14.8
PABPN1Q86U42 CS-210ENST00000547912 674 ntTSL 210.32□□□□□ -0.762e-8■■■□□ 14.8
PABPN1Q86U42 FTCD-211ENST00000494498 840 ntTSL 338.81■■■■□ 3.81e-12■■■□□ 14.8
PABPN1Q86U42 MSH5-SAPCD1-206ENST00000491552 706 ntTSL 331.94■■■□□ 2.71e-6■■■□□ 14.8
PABPN1Q86U42 MSH5-208ENST00000429846 616 ntTSL 331.02■■■□□ 2.561e-6■■■□□ 14.8
PABPN1Q86U42 PSME2-203ENST00000558273 1502 ntTSL 232.51■■■□□ 2.85e-8■■■□□ 14.8
PABPN1Q86U42 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.135e-8■■■□□ 14.8
PABPN1Q86U42 PSME2-217ENST00000615264 874 ntTSL 5 BASIC27.25■■□□□ 1.955e-8■■■□□ 14.8
PABPN1Q86U42 PSME2-204ENST00000558931 2754 ntTSL 524.3■■□□□ 1.485e-8■■■□□ 14.8
PABPN1Q86U42 MORC2-204ENST00000445980 766 ntTSL 519.3■□□□□ 0.681e-6■■■□□ 14.8
PABPN1Q86U42 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.883e-6■■■□□ 14.8
PABPN1Q86U42 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.693e-6■■■□□ 14.8
PABPN1Q86U42 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.176e-7■■■□□ 14.8
PABPN1Q86U42 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.286e-7■■■□□ 14.8
PABPN1Q86U42 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC11.79□□□□□ -0.526e-7■■■□□ 14.8
PABPN1Q86U42 SETD5-202ENST00000399686 3362 ntTSL 511.78□□□□□ -0.526e-7■■■□□ 14.8
PABPN1Q86U42 COL9A3-205ENST00000466192 2194 ntTSL 231.3■■■□□ 2.68e-12■■■□□ 14.8
PABPN1Q86U42 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC29.58■■■□□ 2.336e-7■■■□□ 14.8
PABPN1Q86U42 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.096e-7■■■□□ 14.8
PABPN1Q86U42 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC27.5■■□□□ 1.996e-7■■■□□ 14.8
PABPN1Q86U42 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC25.59■■□□□ 1.696e-7■■■□□ 14.8
PABPN1Q86U42 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC23.78■■□□□ 1.46e-7■■■□□ 14.8
Retrieved 100 of 8,254 protein–RNA pairs in 81.9 ms