RNA–Protein interactions for RNA: ENST00000618139.2

EEF1D-256, Transcript of eukaryotic translation elongation factor 1 delta, humanhuman

TSL 5 BASIC

Gene EEF1D, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1D-256ENST00000618139 NISCHQ9Y2I1 1504 aa49.93■■■■■ 5.58
EEF1D-256ENST00000618139 CCDC180Q9P1Z9 1646 aa43.14■■■■■ 4.5
EEF1D-256ENST00000618139 ZCCHC6Q5VYS8 1495 aaKnown RBP42.04■■■■■ 4.32
EEF1D-256ENST00000618139 SHROOM4Q9ULL8 1493 aa41.48■■■■■ 4.23
EEF1D-256ENST00000618139 DCAF8L2P0C7V8 631 aa41.34■■■■■ 4.21
EEF1D-256ENST00000618139 DCAF1Q9Y4B6 1507 aa41.1■■■■■ 4.17
EEF1D-256ENST00000618139 ABCC9O60706 1549 aa40.57■■■■■ 4.09
EEF1D-256ENST00000618139 MYO15BQ96JP2 1530 aa40.33■■■■■ 4.05
EEF1D-256ENST00000618139 SUPT5HO00267 1087 aaKnown RBP40.15■■■■■ 4.02
EEF1D-256ENST00000618139 NACADO15069 1562 aa40.04■■■■■ 4
EEF1D-256ENST00000618139 SCRIBQ14160 1630 aa40.03■■■■■ 4
EEF1D-256ENST00000618139 RB1CC1Q8TDY2 1594 aa39.6■■■■□ 3.93
EEF1D-256ENST00000618139 UNC13AQ9UPW8 1703 aa39.08■■■■□ 3.85
EEF1D-256ENST00000618139 RSF1Q96T23 1441 aaPredicted RBP39.03■■■■□ 3.84
EEF1D-256ENST00000618139 CECR2Q9BXF3 1484 aa38.93■■■■□ 3.82
EEF1D-256ENST00000618139 MROH2BQ7Z745 1585 aa38.73■■■■□ 3.79
EEF1D-256ENST00000618139 CHIC1Q5VXU3 224 aa38.63■■■■□ 3.78
EEF1D-256ENST00000618139 BICRAQ9NZM4 1560 aa38.56■■■■□ 3.76
EEF1D-256ENST00000618139 WIZO95785 1651 aa38.49■■■■□ 3.75
EEF1D-256ENST00000618139 PABPN1Q86U42 306 aaKnown RBP eCLIP38.47■■■■□ 3.751e-7■■■□□ 15
EEF1D-256ENST00000618139 BAZ1AQ9NRL2 1556 aaPredicted RBP38.45■■■■□ 3.75
EEF1D-256ENST00000618139 SMARCA4P51532 1647 aa38.29■■■■□ 3.72
EEF1D-256ENST00000618139 TOP2AP11388 1531 aaKnown RBP37.91■■■■□ 3.66
EEF1D-256ENST00000618139 PEG3Q9GZU2 1588 aa37.68■■■■□ 3.62
EEF1D-256ENST00000618139 SMARCA2P51531 1590 aa37.66■■■■□ 3.62
EEF1D-256ENST00000618139 CCDC88BA6NC98 1476 aa37.64■■■■□ 3.62
EEF1D-256ENST00000618139 EIF4G1Q04637 1599 aaKnown RBP37.58■■■■□ 3.61
EEF1D-256ENST00000618139 TRIM41Q8WV44 630 aa37.55■■■■□ 3.6
EEF1D-256ENST00000618139 ATAD2BQ9ULI0 1458 aa37.5■■■■□ 3.59
EEF1D-256ENST00000618139 LOC105371045A0A1W2PR82 267 aa37.35■■■■□ 3.57
EEF1D-256ENST00000618139 BAZ1BQ9UIG0 1483 aaKnown RBP37.32■■■■□ 3.56
EEF1D-256ENST00000618139 ABCC8Q09428 1581 aa37.17■■■■□ 3.54
EEF1D-256ENST00000618139 FAM9AQ8IZU1 332 aaPredicted RBP37.1■■■■□ 3.53
EEF1D-256ENST00000618139 NCAPD3P42695 1498 aa37■■■■□ 3.51
EEF1D-256ENST00000618139 HMGXB3Q12766 1538 aa36.97■■■■□ 3.51
EEF1D-256ENST00000618139 EHMT2Q96KQ7 1210 aa36.72■■■■□ 3.47
EEF1D-256ENST00000618139 WRNQ14191 1432 aaPredicted RBP eCLIP36.67■■■■□ 3.462e-6■■■□□ 16.6
EEF1D-256ENST00000618139 CC2D2AQ9P2K1 1620 aa36.66■■■■□ 3.46
EEF1D-256ENST00000618139 SYNJ1O43426 1573 aa36.61■■■■□ 3.45
EEF1D-256ENST00000618139 SOGA1O94964 1423 aa36.56■■■■□ 3.44
EEF1D-256ENST00000618139 RUSC2Q8N2Y8 1516 aa36.45■■■■□ 3.43
EEF1D-256ENST00000618139 CFTRP13569 1480 aa36.39■■■■□ 3.42
EEF1D-256ENST00000618139 TOP2BQ02880 1626 aa36.29■■■■□ 3.4
EEF1D-256ENST00000618139 EEA1Q15075 1411 aa36.27■■■■□ 3.4
EEF1D-256ENST00000618139 BIVM-ERCC5R4GMW8 1640 aa36.23■■■■□ 3.39
EEF1D-256ENST00000618139 PRDM2Q13029 1718 aa36.23■■■■□ 3.39
EEF1D-256ENST00000618139 CSRNP3Q8WYN3 585 aa36.23■■■■□ 3.39
EEF1D-256ENST00000618139 PCGF6Q9BYE7 350 aa36.2■■■■□ 3.39
EEF1D-256ENST00000618139 CADPSQ9ULU8 1353 aa36.14■■■■□ 3.38
EEF1D-256ENST00000618139 CUX1P39880 1505 aa36.13■■■■□ 3.37
EEF1D-256ENST00000618139 GOLGA3Q08378 1498 aa35.94■■■■□ 3.34
EEF1D-256ENST00000618139 TNIKQ9UKE5 1360 aa35.94■■■■□ 3.34
EEF1D-256ENST00000618139 KIF21BO75037 1637 aa35.9■■■■□ 3.34
EEF1D-256ENST00000618139 UBTFP17480 764 aaKnown RBP35.89■■■■□ 3.34
EEF1D-256ENST00000618139 CEP162Q5TB80 1403 aa35.88■■■■□ 3.33
EEF1D-256ENST00000618139 CEP164Q9UPV0 1460 aa35.86■■■■□ 3.33
EEF1D-256ENST00000618139 NESP48681 1621 aa35.86■■■■□ 3.33
EEF1D-256ENST00000618139 TRIM26Q12899 539 aaPredicted RBP35.86■■■■□ 3.33
EEF1D-256ENST00000618139 DNAJC5BQ9UF47 199 aa35.86■■■■□ 3.33
EEF1D-256ENST00000618139 FANCD2Q9BXW9 1451 aa35.79■■■■□ 3.32
EEF1D-256ENST00000618139 RAPGEF2Q9Y4G8 1499 aa35.75■■■■□ 3.31
EEF1D-256ENST00000618139 PPARGC1BQ86YN6 1023 aaKnown RBP35.66■■■■□ 3.3
EEF1D-256ENST00000618139 KIF27Q86VH2 1401 aa35.64■■■■□ 3.3
EEF1D-256ENST00000618139 LAMC3Q9Y6N6 1575 aa35.64■■■■□ 3.3
EEF1D-256ENST00000618139 FGD5Q6ZNL6 1462 aa35.63■■■■□ 3.3
EEF1D-256ENST00000618139 PRXQ9BXM0 1461 aa35.58■■■■□ 3.29
EEF1D-256ENST00000618139 DNMBPQ6XZF7 1577 aa35.52■■■■□ 3.28
EEF1D-256ENST00000618139 HRCP23327 699 aa35.51■■■■□ 3.28
EEF1D-256ENST00000618139 CUX2O14529 1486 aa35.51■■■■□ 3.28
EEF1D-256ENST00000618139 ERICH3Q5RHP9 1530 aa35.51■■■■□ 3.28
EEF1D-256ENST00000618139 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
EEF1D-256ENST00000618139 CLIP1P30622 1438 aa35.45■■■■□ 3.27
EEF1D-256ENST00000618139 POLA1P09884 1462 aaPredicted RBP35.37■■■■□ 3.25
EEF1D-256ENST00000618139 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
EEF1D-256ENST00000618139 RANGAP1P46060 587 aaPredicted RBP35.37■■■■□ 3.25
EEF1D-256ENST00000618139 URB2Q14146 1524 aaKnown RBP35.37■■■■□ 3.25
EEF1D-256ENST00000618139 RAD54L2Q9Y4B4 1467 aa35.36■■■■□ 3.25
EEF1D-256ENST00000618139 IGF1RP08069 1367 aa35.35■■■■□ 3.25
EEF1D-256ENST00000618139 PDS5BQ9NTI5 1447 aa35.34■■■■□ 3.25
EEF1D-256ENST00000618139 TTBK1Q5TCY1 1321 aaPredicted RBP35.26■■■■□ 3.23
EEF1D-256ENST00000618139 ABCA10Q8WWZ4 1543 aa35.24■■■■□ 3.23
EEF1D-256ENST00000618139 VPS8Q8N3P4 1428 aa35.18■■■■□ 3.22
EEF1D-256ENST00000618139 CARMIL1Q5VZK9 1371 aa35.16■■■■□ 3.22
EEF1D-256ENST00000618139 WDR97A6NE52 1622 aa35.13■■■■□ 3.21
EEF1D-256ENST00000618139 ARAP1Q96P48 1450 aa35.07■■■■□ 3.21
EEF1D-256ENST00000618139 TDRD9Q8NDG6 1382 aaKnown RBP34.96■■■■□ 3.19
EEF1D-256ENST00000618139 ARHGAP35Q9NRY4 1499 aa34.95■■■■□ 3.19
EEF1D-256ENST00000618139 ABCA5Q8WWZ7 1642 aa34.95■■■■□ 3.19
EEF1D-256ENST00000618139 CUL7Q14999 1698 aa34.92■■■■□ 3.18
EEF1D-256ENST00000618139 TARBP1Q13395 1621 aaKnown RBP34.91■■■■□ 3.18
EEF1D-256ENST00000618139 MRC2Q9UBG0 1479 aa34.9■■■■□ 3.18
EEF1D-256ENST00000618139 GAPVD1Q14C86 1478 aa34.85■■■■□ 3.17
EEF1D-256ENST00000618139 APLP2Q06481 763 aa34.83■■■■□ 3.17
EEF1D-256ENST00000618139 CTTNBP2Q8WZ74 1663 aa34.71■■■■□ 3.15
EEF1D-256ENST00000618139 WDR62O43379 1518 aa34.69■■■■□ 3.14
EEF1D-256ENST00000618139 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
EEF1D-256ENST00000618139 AQRO60306 1485 aaKnown RBP eCLIP34.64■■■■□ 3.149e-8■■■■■ 45.4
EEF1D-256ENST00000618139 KANK4Q5T7N3 995 aaPredicted RBP34.63■■■■□ 3.13
EEF1D-256ENST00000618139 ERCC6Q03468 1493 aa34.61■■■■□ 3.13
EEF1D-256ENST00000618139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms