RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 NISCHQ9Y2I1 1504 aa18.06■□□□□ 0.48
GSDMB-208ENST00000477054 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
GSDMB-208ENST00000477054 SUPT5HO00267 1087 aaKnown RBP16.43■□□□□ 0.22
GSDMB-208ENST00000477054 SHROOM4Q9ULL8 1493 aa16.39■□□□□ 0.21
GSDMB-208ENST00000477054 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
GSDMB-208ENST00000477054 MYT1Q01538 1121 aa15.52■□□□□ 0.07
GSDMB-208ENST00000477054 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
GSDMB-208ENST00000477054 PCGF6Q9BYE7 350 aa15.37■□□□□ 0.05
GSDMB-208ENST00000477054 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
GSDMB-208ENST00000477054 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
GSDMB-208ENST00000477054 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
GSDMB-208ENST00000477054 HRCP23327 699 aa15.12■□□□□ 0.01
GSDMB-208ENST00000477054 ZCCHC6Q5VYS8 1495 aaKnown RBP15.11■□□□□ 0.01
GSDMB-208ENST00000477054 ZEB1P37275 1124 aaPredicted RBP15.08■□□□□ 0
GSDMB-208ENST00000477054 APLP2Q06481 763 aa15.07■□□□□ 0
GSDMB-208ENST00000477054 CCDC180Q9P1Z9 1646 aa15.07■□□□□ 0
GSDMB-208ENST00000477054 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
GSDMB-208ENST00000477054 LOC105371045A0A1W2PR82 267 aa14.95□□□□□ -0.02
GSDMB-208ENST00000477054 TTBK1Q5TCY1 1321 aaPredicted RBP14.92□□□□□ -0.02
GSDMB-208ENST00000477054 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
GSDMB-208ENST00000477054 CCER1Q8TC90 406 aaPredicted RBP14.86□□□□□ -0.03
GSDMB-208ENST00000477054 ABCC9O60706 1549 aa14.86□□□□□ -0.03
GSDMB-208ENST00000477054 CENPBP07199 599 aaPredicted RBP14.79□□□□□ -0.04
GSDMB-208ENST00000477054 RANGAP1P46060 587 aaPredicted RBP14.74□□□□□ -0.05
GSDMB-208ENST00000477054 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.05
GSDMB-208ENST00000477054 SCRIBQ14160 1630 aa14.64□□□□□ -0.07
GSDMB-208ENST00000477054 DCAF1Q9Y4B6 1507 aa14.54□□□□□ -0.08
GSDMB-208ENST00000477054 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.092e-7■■■□□ 14.9
GSDMB-208ENST00000477054 ATP1B4Q9UN42 357 aaPredicted RBP14.48□□□□□ -0.09
GSDMB-208ENST00000477054 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
GSDMB-208ENST00000477054 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
GSDMB-208ENST00000477054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.39□□□□□ -0.11
GSDMB-208ENST00000477054 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
GSDMB-208ENST00000477054 NACADO15069 1562 aa14.34□□□□□ -0.11
GSDMB-208ENST00000477054 YTHDC1Q96MU7 727 aaKnown RBP14.31□□□□□ -0.12
GSDMB-208ENST00000477054 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
GSDMB-208ENST00000477054 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
GSDMB-208ENST00000477054 ITGAEP38570 1179 aa14.24□□□□□ -0.13
GSDMB-208ENST00000477054 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
GSDMB-208ENST00000477054 GTF3C3Q9Y5Q9 886 aa14.22□□□□□ -0.13
GSDMB-208ENST00000477054 SCAF1Q9H7N4 1312 aaKnown RBP14.22□□□□□ -0.13
GSDMB-208ENST00000477054 ACIN1Q9UKV3 1341 aaKnown RBP14.2□□□□□ -0.14
GSDMB-208ENST00000477054 ERICH6Q7L0X2 663 aa14.17□□□□□ -0.14
GSDMB-208ENST00000477054 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
GSDMB-208ENST00000477054 NEFLP07196 543 aa14.09□□□□□ -0.15
GSDMB-208ENST00000477054 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
GSDMB-208ENST00000477054 EEA1Q15075 1411 aa14.05□□□□□ -0.16
GSDMB-208ENST00000477054 ZNF316A6NFI3 1004 aaPredicted RBP14.03□□□□□ -0.16
GSDMB-208ENST00000477054 FAM50AQ14320 339 aaKnown RBP14.02□□□□□ -0.16
GSDMB-208ENST00000477054 MROH2BQ7Z745 1585 aa13.98□□□□□ -0.17
GSDMB-208ENST00000477054 CEP162Q5TB80 1403 aa13.96□□□□□ -0.18
GSDMB-208ENST00000477054 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
GSDMB-208ENST00000477054 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
GSDMB-208ENST00000477054 TNIKQ9UKE5 1360 aa13.92□□□□□ -0.18
GSDMB-208ENST00000477054 NEUROD1Q13562 356 aa13.92□□□□□ -0.18
GSDMB-208ENST00000477054 CLIP1P30622 1438 aa13.92□□□□□ -0.18
GSDMB-208ENST00000477054 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
GSDMB-208ENST00000477054 CEP164Q9UPV0 1460 aa13.85□□□□□ -0.19
GSDMB-208ENST00000477054 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
GSDMB-208ENST00000477054 CCDC88BA6NC98 1476 aa13.83□□□□□ -0.2
GSDMB-208ENST00000477054 WIZO95785 1651 aa13.82□□□□□ -0.2
GSDMB-208ENST00000477054 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
GSDMB-208ENST00000477054 TOP2AP11388 1531 aaKnown RBP13.79□□□□□ -0.2
GSDMB-208ENST00000477054 SOGA1O94964 1423 aa13.77□□□□□ -0.2
GSDMB-208ENST00000477054 POLR3GLQ9BT43 218 aa13.76□□□□□ -0.21
GSDMB-208ENST00000477054 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
GSDMB-208ENST00000477054 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
GSDMB-208ENST00000477054 ANP32CO43423 234 aa13.72□□□□□ -0.21
GSDMB-208ENST00000477054 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
GSDMB-208ENST00000477054 SMARCA2P51531 1590 aa13.68□□□□□ -0.22
GSDMB-208ENST00000477054 BCL11AQ9H165 835 aa13.67□□□□□ -0.22
GSDMB-208ENST00000477054 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
GSDMB-208ENST00000477054 ANP32EQ9BTT0 268 aa13.65□□□□□ -0.22
GSDMB-208ENST00000477054 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
GSDMB-208ENST00000477054 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
GSDMB-208ENST00000477054 TONSLQ96HA7 1378 aa13.61□□□□□ -0.23
GSDMB-208ENST00000477054 FBLN2P98095 1184 aa13.61□□□□□ -0.23
GSDMB-208ENST00000477054 CDK11AQ9UQ88 783 aaPredicted RBP13.61□□□□□ -0.23
GSDMB-208ENST00000477054 VPS8Q8N3P4 1428 aa13.6□□□□□ -0.23
GSDMB-208ENST00000477054 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
GSDMB-208ENST00000477054 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.24
GSDMB-208ENST00000477054 MIER1Q8N108 512 aa13.57□□□□□ -0.24
GSDMB-208ENST00000477054 BCANQ96GW7 911 aa13.54□□□□□ -0.24
GSDMB-208ENST00000477054 ATAD2BQ9ULI0 1458 aa13.53□□□□□ -0.24
GSDMB-208ENST00000477054 ZNF326Q5BKZ1 582 aaKnown RBP13.53□□□□□ -0.24
GSDMB-208ENST00000477054 DDX10Q13206 875 aaKnown RBP13.51□□□□□ -0.25
GSDMB-208ENST00000477054 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
GSDMB-208ENST00000477054 CUX2O14529 1486 aa13.5□□□□□ -0.25
GSDMB-208ENST00000477054 ZNF777Q9ULD5 760 aaPredicted RBP13.49□□□□□ -0.25
GSDMB-208ENST00000477054 CARMIL1Q5VZK9 1371 aa13.48□□□□□ -0.25
GSDMB-208ENST00000477054 CCNB3Q8WWL7 1395 aa13.48□□□□□ -0.25
GSDMB-208ENST00000477054 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
GSDMB-208ENST00000477054 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
GSDMB-208ENST00000477054 RUSC2Q8N2Y8 1516 aa13.45□□□□□ -0.26
GSDMB-208ENST00000477054 RAPGEF2Q9Y4G8 1499 aa13.42□□□□□ -0.26
GSDMB-208ENST00000477054 KANK4Q5T7N3 995 aaPredicted RBP13.39□□□□□ -0.27
GSDMB-208ENST00000477054 FKBP8Q14318 412 aa13.38□□□□□ -0.27
GSDMB-208ENST00000477054 DAXXQ9UER7 740 aaPredicted RBP13.37□□□□□ -0.27
GSDMB-208ENST00000477054 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
GSDMB-208ENST00000477054 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms