RNA–Protein interactions for RNA: ENST00000493250.1

ACSS2-221, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 2

Gene ACSS2, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-221ENST00000493250 NISCHQ9Y2I1 1504 aa32.7■■■□□ 2.83
ACSS2-221ENST00000493250 ABCC9O60706 1549 aa29.53■■■□□ 2.32
ACSS2-221ENST00000493250 CCDC180Q9P1Z9 1646 aa29.47■■■□□ 2.31
ACSS2-221ENST00000493250 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
ACSS2-221ENST00000493250 NACADO15069 1562 aa27.86■■■□□ 2.05
ACSS2-221ENST00000493250 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
ACSS2-221ENST00000493250 DNAJC5BQ9UF47 199 aa27.69■■■□□ 2.02
ACSS2-221ENST00000493250 UNC13AQ9UPW8 1703 aa27.46■■□□□ 1.99
ACSS2-221ENST00000493250 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.981e-10■■■□□ 14.9
ACSS2-221ENST00000493250 MYO15BQ96JP2 1530 aa27.41■■□□□ 1.98
ACSS2-221ENST00000493250 BICRAQ9NZM4 1560 aa27.21■■□□□ 1.95
ACSS2-221ENST00000493250 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
ACSS2-221ENST00000493250 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
ACSS2-221ENST00000493250 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
ACSS2-221ENST00000493250 SCRIBQ14160 1630 aa26.83■■□□□ 1.88
ACSS2-221ENST00000493250 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
ACSS2-221ENST00000493250 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
ACSS2-221ENST00000493250 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
ACSS2-221ENST00000493250 NCAPD3P42695 1498 aa25.67■■□□□ 1.7
ACSS2-221ENST00000493250 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
ACSS2-221ENST00000493250 ATAD2BQ9ULI0 1458 aa25.58■■□□□ 1.69
ACSS2-221ENST00000493250 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
ACSS2-221ENST00000493250 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
ACSS2-221ENST00000493250 SMARCA4P51532 1647 aa25.56■■□□□ 1.68
ACSS2-221ENST00000493250 CUX2O14529 1486 aa25.53■■□□□ 1.68
ACSS2-221ENST00000493250 HMGXB3Q12766 1538 aa25.52■■□□□ 1.68
ACSS2-221ENST00000493250 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
ACSS2-221ENST00000493250 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
ACSS2-221ENST00000493250 NESP48681 1621 aa25.3■■□□□ 1.64
ACSS2-221ENST00000493250 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
ACSS2-221ENST00000493250 MROH2BQ7Z745 1585 aa25.18■■□□□ 1.62
ACSS2-221ENST00000493250 LAMC3Q9Y6N6 1575 aa25.17■■□□□ 1.62
ACSS2-221ENST00000493250 THOC2Q8NI27 1593 aaKnown RBP25.11■■□□□ 1.61
ACSS2-221ENST00000493250 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
ACSS2-221ENST00000493250 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
ACSS2-221ENST00000493250 WIZO95785 1651 aa24.91■■□□□ 1.58
ACSS2-221ENST00000493250 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
ACSS2-221ENST00000493250 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
ACSS2-221ENST00000493250 WDR62O43379 1518 aa24.74■■□□□ 1.55
ACSS2-221ENST00000493250 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.55
ACSS2-221ENST00000493250 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.54
ACSS2-221ENST00000493250 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
ACSS2-221ENST00000493250 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
ACSS2-221ENST00000493250 CFTRP13569 1480 aa24.58■■□□□ 1.53
ACSS2-221ENST00000493250 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
ACSS2-221ENST00000493250 PRDM2Q13029 1718 aa24.44■■□□□ 1.5
ACSS2-221ENST00000493250 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
ACSS2-221ENST00000493250 OSCARQ8IYS5 282 aa24.32■■□□□ 1.48
ACSS2-221ENST00000493250 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
ACSS2-221ENST00000493250 IFT140Q96RY7 1462 aa24.2■■□□□ 1.47
ACSS2-221ENST00000493250 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
ACSS2-221ENST00000493250 ABCC8Q09428 1581 aa24.14■■□□□ 1.45
ACSS2-221ENST00000493250 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
ACSS2-221ENST00000493250 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.45
ACSS2-221ENST00000493250 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
ACSS2-221ENST00000493250 RIMBP3CA6NJZ7 1639 aa24.04■■□□□ 1.44
ACSS2-221ENST00000493250 RIMBP3BA6NNM3 1639 aa24.04■■□□□ 1.44
ACSS2-221ENST00000493250 RIMBP3Q9UFD9 1639 aa24.04■■□□□ 1.44
ACSS2-221ENST00000493250 TARBP1Q13395 1621 aaKnown RBP23.94■■□□□ 1.42
ACSS2-221ENST00000493250 ARHGEF11O15085 1522 aa23.94■■□□□ 1.42
ACSS2-221ENST00000493250 CHD1O14646 1710 aa23.92■■□□□ 1.42
ACSS2-221ENST00000493250 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.42
ACSS2-221ENST00000493250 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
ACSS2-221ENST00000493250 FBLN2P98095 1184 aa23.82■■□□□ 1.4
ACSS2-221ENST00000493250 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
ACSS2-221ENST00000493250 SOGA1O94964 1423 aa23.78■■□□□ 1.4
ACSS2-221ENST00000493250 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
ACSS2-221ENST00000493250 CYB5RLQ6IPT4 315 aa23.75■■□□□ 1.39
ACSS2-221ENST00000493250 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
ACSS2-221ENST00000493250 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
ACSS2-221ENST00000493250 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
ACSS2-221ENST00000493250 CUX1P39880 1505 aa23.68■■□□□ 1.38
ACSS2-221ENST00000493250 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
ACSS2-221ENST00000493250 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
ACSS2-221ENST00000493250 SYNJ1O43426 1573 aa23.62■■□□□ 1.37
ACSS2-221ENST00000493250 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
ACSS2-221ENST00000493250 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
ACSS2-221ENST00000493250 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
ACSS2-221ENST00000493250 TRHP20396 242 aaPredicted RBP23.58■■□□□ 1.37
ACSS2-221ENST00000493250 PBRM1Q86U86 1689 aa23.56■■□□□ 1.36
ACSS2-221ENST00000493250 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
ACSS2-221ENST00000493250 GAPVD1Q14C86 1478 aa23.51■■□□□ 1.35
ACSS2-221ENST00000493250 SUPT5HO00267 1087 aaKnown RBP23.47■■□□□ 1.35
ACSS2-221ENST00000493250 ABCA10Q8WWZ4 1543 aa23.45■■□□□ 1.34
ACSS2-221ENST00000493250 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
ACSS2-221ENST00000493250 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
ACSS2-221ENST00000493250 BIVM-ERCC5R4GMW8 1640 aa23.31■■□□□ 1.32
ACSS2-221ENST00000493250 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
ACSS2-221ENST00000493250 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
ACSS2-221ENST00000493250 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
ACSS2-221ENST00000493250 CEP170Q5SW79 1584 aa23.22■■□□□ 1.31
ACSS2-221ENST00000493250 FHAD1B1AJZ9 1412 aa23.21■■□□□ 1.31
ACSS2-221ENST00000493250 NUP160Q12769 1436 aa23.2■■□□□ 1.3
ACSS2-221ENST00000493250 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
ACSS2-221ENST00000493250 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
ACSS2-221ENST00000493250 SHROOM2Q13796 1616 aa23.14■■□□□ 1.29
ACSS2-221ENST00000493250 AEBP2Q6ZN18 517 aaPredicted RBP23.02■■□□□ 1.28
ACSS2-221ENST00000493250 PRG4Q92954 1404 aaPredicted RBP23.01■■□□□ 1.27
ACSS2-221ENST00000493250 JPH4Q96JJ6 628 aa22.96■■□□□ 1.27
ACSS2-221ENST00000493250 RUSC2Q8N2Y8 1516 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms