RNA–Protein interactions for RNA: ENST00000545227.6

LLGL2-204, Transcript of LLGL2, scribble cell polarity complex component, humanhuman

TSL 2

Gene LLGL2, Length 3,527 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL2-204ENST00000545227 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
LLGL2-204ENST00000545227 SHROOM4Q9ULL8 1493 aa20.65■□□□□ 0.9
LLGL2-204ENST00000545227 DCAF8L2P0C7V8 631 aa20.44■□□□□ 0.86
LLGL2-204ENST00000545227 SUPT5HO00267 1087 aaKnown RBP20.21■□□□□ 0.83
LLGL2-204ENST00000545227 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
LLGL2-204ENST00000545227 CCDC180Q9P1Z9 1646 aa19.5■□□□□ 0.71
LLGL2-204ENST00000545227 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
LLGL2-204ENST00000545227 MYO15BQ96JP2 1530 aa19.02■□□□□ 0.64
LLGL2-204ENST00000545227 EHMT2Q96KQ7 1210 aa19.01■□□□□ 0.63
LLGL2-204ENST00000545227 ABCC9O60706 1549 aa19■□□□□ 0.63
LLGL2-204ENST00000545227 LOC105371045A0A1W2PR82 267 aa18.93■□□□□ 0.62
LLGL2-204ENST00000545227 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
LLGL2-204ENST00000545227 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.6
LLGL2-204ENST00000545227 PCGF6Q9BYE7 350 aa18.8■□□□□ 0.6
LLGL2-204ENST00000545227 DCAF1Q9Y4B6 1507 aa18.71■□□□□ 0.59
LLGL2-204ENST00000545227 TRIM41Q8WV44 630 aa18.58■□□□□ 0.57
LLGL2-204ENST00000545227 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
LLGL2-204ENST00000545227 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
LLGL2-204ENST00000545227 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
LLGL2-204ENST00000545227 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.543e-7■■■□□ 14.9
LLGL2-204ENST00000545227 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
LLGL2-204ENST00000545227 HRCP23327 699 aa18.33■□□□□ 0.53
LLGL2-204ENST00000545227 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
LLGL2-204ENST00000545227 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
LLGL2-204ENST00000545227 NACADO15069 1562 aa18.22■□□□□ 0.51
LLGL2-204ENST00000545227 WIZO95785 1651 aa18.18■□□□□ 0.5
LLGL2-204ENST00000545227 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
LLGL2-204ENST00000545227 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
LLGL2-204ENST00000545227 ABCC8Q09428 1581 aa17.9■□□□□ 0.46
LLGL2-204ENST00000545227 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
LLGL2-204ENST00000545227 UBTFP17480 764 aaKnown RBP17.86■□□□□ 0.45
LLGL2-204ENST00000545227 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
LLGL2-204ENST00000545227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
LLGL2-204ENST00000545227 UNC13AQ9UPW8 1703 aa17.76■□□□□ 0.43
LLGL2-204ENST00000545227 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
LLGL2-204ENST00000545227 SOGA1O94964 1423 aa17.73■□□□□ 0.43
LLGL2-204ENST00000545227 RUSC2Q8N2Y8 1516 aa17.67■□□□□ 0.42
LLGL2-204ENST00000545227 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
LLGL2-204ENST00000545227 CCER1Q8TC90 406 aaPredicted RBP17.65■□□□□ 0.42
LLGL2-204ENST00000545227 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
LLGL2-204ENST00000545227 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
LLGL2-204ENST00000545227 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
LLGL2-204ENST00000545227 CEP162Q5TB80 1403 aa17.5■□□□□ 0.39
LLGL2-204ENST00000545227 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
LLGL2-204ENST00000545227 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
LLGL2-204ENST00000545227 EIF4G1Q04637 1599 aaKnown RBP17.48■□□□□ 0.39
LLGL2-204ENST00000545227 ZEB1P37275 1124 aaPredicted RBP17.47■□□□□ 0.39
LLGL2-204ENST00000545227 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
LLGL2-204ENST00000545227 ATAD2BQ9ULI0 1458 aa17.42■□□□□ 0.38
LLGL2-204ENST00000545227 APLP2Q06481 763 aa17.36■□□□□ 0.37
LLGL2-204ENST00000545227 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
LLGL2-204ENST00000545227 TNIKQ9UKE5 1360 aa17.31■□□□□ 0.36
LLGL2-204ENST00000545227 GOLGA3Q08378 1498 aa17.27■□□□□ 0.35
LLGL2-204ENST00000545227 ITGAEP38570 1179 aa17.24■□□□□ 0.35
LLGL2-204ENST00000545227 RAPGEF2Q9Y4G8 1499 aa17.23■□□□□ 0.35
LLGL2-204ENST00000545227 CLIP1P30622 1438 aa17.23■□□□□ 0.35
LLGL2-204ENST00000545227 ATP1B4Q9UN42 357 aaPredicted RBP17.21■□□□□ 0.34
LLGL2-204ENST00000545227 EEA1Q15075 1411 aa17.17■□□□□ 0.34
LLGL2-204ENST00000545227 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
LLGL2-204ENST00000545227 P3H3Q8IVL6 736 aa17.14■□□□□ 0.33
LLGL2-204ENST00000545227 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
LLGL2-204ENST00000545227 DIEXFQ68CQ4 756 aaKnown RBP17.1■□□□□ 0.33
LLGL2-204ENST00000545227 YTHDC1Q96MU7 727 aaKnown RBP17.1■□□□□ 0.33
LLGL2-204ENST00000545227 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
LLGL2-204ENST00000545227 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
LLGL2-204ENST00000545227 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
LLGL2-204ENST00000545227 CUX1P39880 1505 aa16.97■□□□□ 0.31
LLGL2-204ENST00000545227 NCAPD3P42695 1498 aa16.96■□□□□ 0.31
LLGL2-204ENST00000545227 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
LLGL2-204ENST00000545227 TOP2BQ02880 1626 aa16.94■□□□□ 0.3
LLGL2-204ENST00000545227 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
LLGL2-204ENST00000545227 CUX2O14529 1486 aa16.92■□□□□ 0.3
LLGL2-204ENST00000545227 KIF21BO75037 1637 aa16.92■□□□□ 0.3
LLGL2-204ENST00000545227 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
LLGL2-204ENST00000545227 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
LLGL2-204ENST00000545227 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
LLGL2-204ENST00000545227 CFTRP13569 1480 aa16.86■□□□□ 0.29
LLGL2-204ENST00000545227 ARAP1Q96P48 1450 aa16.85■□□□□ 0.29
LLGL2-204ENST00000545227 NESP48681 1621 aa16.83■□□□□ 0.29
LLGL2-204ENST00000545227 ARID3CA6NKF2 412 aa16.83■□□□□ 0.29
LLGL2-204ENST00000545227 CADPSQ9ULU8 1353 aa16.83■□□□□ 0.29
LLGL2-204ENST00000545227 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
LLGL2-204ENST00000545227 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
LLGL2-204ENST00000545227 MIER1Q8N108 512 aa16.8■□□□□ 0.28
LLGL2-204ENST00000545227 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
LLGL2-204ENST00000545227 RAD54L2Q9Y4B4 1467 aa16.78■□□□□ 0.28
LLGL2-204ENST00000545227 IGF1RP08069 1367 aa16.78■□□□□ 0.28
LLGL2-204ENST00000545227 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
LLGL2-204ENST00000545227 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
LLGL2-204ENST00000545227 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
LLGL2-204ENST00000545227 GTF3C3Q9Y5Q9 886 aa16.76■□□□□ 0.27
LLGL2-204ENST00000545227 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
LLGL2-204ENST00000545227 ACIN1Q9UKV3 1341 aaKnown RBP16.75■□□□□ 0.27
LLGL2-204ENST00000545227 ARHGAP35Q9NRY4 1499 aa16.72■□□□□ 0.27
LLGL2-204ENST00000545227 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
LLGL2-204ENST00000545227 CENPBP07199 599 aaPredicted RBP16.71■□□□□ 0.27
LLGL2-204ENST00000545227 TDRD9Q8NDG6 1382 aaKnown RBP16.71■□□□□ 0.27
LLGL2-204ENST00000545227 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
LLGL2-204ENST00000545227 FHOD3Q2V2M9 1422 aa16.66■□□□□ 0.26
LLGL2-204ENST00000545227 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms