RNA–Protein interactions for RNA: ENST00000369923.4

SARS-202, Transcript of seryl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene SARS, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS-202ENST00000369923 NISCHQ9Y2I1 1504 aa33.19■■■□□ 2.9
SARS-202ENST00000369923 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
SARS-202ENST00000369923 ABCC9O60706 1549 aa28.03■■■□□ 2.08
SARS-202ENST00000369923 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
SARS-202ENST00000369923 DCAF8L2P0C7V8 631 aa27.49■■□□□ 1.99
SARS-202ENST00000369923 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
SARS-202ENST00000369923 MYO15BQ96JP2 1530 aa27.25■■□□□ 1.95
SARS-202ENST00000369923 NACADO15069 1562 aa27.24■■□□□ 1.95
SARS-202ENST00000369923 RB1CC1Q8TDY2 1594 aa27.12■■□□□ 1.93
SARS-202ENST00000369923 SCRIBQ14160 1630 aa26.78■■□□□ 1.88
SARS-202ENST00000369923 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
SARS-202ENST00000369923 UNC13AQ9UPW8 1703 aa26.7■■□□□ 1.87
SARS-202ENST00000369923 BICRAQ9NZM4 1560 aa26.43■■□□□ 1.82
SARS-202ENST00000369923 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.812e-7■■■□□ 14.8
SARS-202ENST00000369923 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
SARS-202ENST00000369923 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
SARS-202ENST00000369923 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
SARS-202ENST00000369923 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
SARS-202ENST00000369923 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
SARS-202ENST00000369923 RSF1Q96T23 1441 aaPredicted RBP25.57■■□□□ 1.68
SARS-202ENST00000369923 WIZO95785 1651 aa25.44■■□□□ 1.66
SARS-202ENST00000369923 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
SARS-202ENST00000369923 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
SARS-202ENST00000369923 PEG3Q9GZU2 1588 aa25.33■■□□□ 1.65
SARS-202ENST00000369923 ATAD2BQ9ULI0 1458 aa25.32■■□□□ 1.64
SARS-202ENST00000369923 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
SARS-202ENST00000369923 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
SARS-202ENST00000369923 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
SARS-202ENST00000369923 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
SARS-202ENST00000369923 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
SARS-202ENST00000369923 HMGXB3Q12766 1538 aa25.08■■□□□ 1.61
SARS-202ENST00000369923 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
SARS-202ENST00000369923 NESP48681 1621 aa24.51■■□□□ 1.51
SARS-202ENST00000369923 CFTRP13569 1480 aa24.48■■□□□ 1.51
SARS-202ENST00000369923 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
SARS-202ENST00000369923 LAMC3Q9Y6N6 1575 aa24.37■■□□□ 1.49
SARS-202ENST00000369923 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
SARS-202ENST00000369923 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
SARS-202ENST00000369923 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
SARS-202ENST00000369923 FANCD2Q9BXW9 1451 aa24.21■■□□□ 1.47
SARS-202ENST00000369923 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
SARS-202ENST00000369923 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
SARS-202ENST00000369923 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.44
SARS-202ENST00000369923 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
SARS-202ENST00000369923 WRNQ14191 1432 aaPredicted RBP eCLIP24.03■■□□□ 1.44
SARS-202ENST00000369923 CUX1P39880 1505 aa24.02■■□□□ 1.44
SARS-202ENST00000369923 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
SARS-202ENST00000369923 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
SARS-202ENST00000369923 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
SARS-202ENST00000369923 THOC2Q8NI27 1593 aaKnown RBP23.93■■□□□ 1.42
SARS-202ENST00000369923 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
SARS-202ENST00000369923 MRC2Q9UBG0 1479 aa23.92■■□□□ 1.42
SARS-202ENST00000369923 TOPBP1Q92547 1522 aa23.91■■□□□ 1.42
SARS-202ENST00000369923 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
SARS-202ENST00000369923 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
SARS-202ENST00000369923 WDR62O43379 1518 aa23.84■■□□□ 1.41
SARS-202ENST00000369923 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
SARS-202ENST00000369923 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
SARS-202ENST00000369923 CUX2O14529 1486 aa23.71■■□□□ 1.39
SARS-202ENST00000369923 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
SARS-202ENST00000369923 SOGA1O94964 1423 aa23.64■■□□□ 1.37
SARS-202ENST00000369923 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.37
SARS-202ENST00000369923 RUSC2Q8N2Y8 1516 aa23.62■■□□□ 1.37
SARS-202ENST00000369923 WDR97A6NE52 1622 aa23.6■■□□□ 1.37
SARS-202ENST00000369923 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
SARS-202ENST00000369923 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
SARS-202ENST00000369923 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
SARS-202ENST00000369923 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
SARS-202ENST00000369923 TDRD9Q8NDG6 1382 aaKnown RBP23.49■■□□□ 1.35
SARS-202ENST00000369923 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.35
SARS-202ENST00000369923 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.344e-7■■■■■ 29.1
SARS-202ENST00000369923 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
SARS-202ENST00000369923 EIF4G3O43432 1585 aaKnown RBP23.4■■□□□ 1.34
SARS-202ENST00000369923 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
SARS-202ENST00000369923 EEA1Q15075 1411 aa23.35■■□□□ 1.33
SARS-202ENST00000369923 IGF1RP08069 1367 aa23.34■■□□□ 1.33
SARS-202ENST00000369923 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
SARS-202ENST00000369923 CSRNP3Q8WYN3 585 aa23.32■■□□□ 1.32
SARS-202ENST00000369923 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
SARS-202ENST00000369923 GRIN2BQ13224 1484 aa23.25■■□□□ 1.31
SARS-202ENST00000369923 PRXQ9BXM0 1461 aa23.22■■□□□ 1.31
SARS-202ENST00000369923 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
SARS-202ENST00000369923 LOC105371045A0A1W2PR82 267 aa23.2■■□□□ 1.3
SARS-202ENST00000369923 SNAPC4Q5SXM2 1469 aa23.19■■□□□ 1.3
SARS-202ENST00000369923 CARMIL1Q5VZK9 1371 aa23.17■■□□□ 1.3
SARS-202ENST00000369923 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
SARS-202ENST00000369923 CUL7Q14999 1698 aa23.17■■□□□ 1.3
SARS-202ENST00000369923 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
SARS-202ENST00000369923 KIF21BO75037 1637 aa23.16■■□□□ 1.3
SARS-202ENST00000369923 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
SARS-202ENST00000369923 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
SARS-202ENST00000369923 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
SARS-202ENST00000369923 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
SARS-202ENST00000369923 CHD1O14646 1710 aa23.01■■□□□ 1.27
SARS-202ENST00000369923 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
SARS-202ENST00000369923 FBLN2P98095 1184 aa22.97■■□□□ 1.27
SARS-202ENST00000369923 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
SARS-202ENST00000369923 UBTFP17480 764 aaKnown RBP22.94■■□□□ 1.26
SARS-202ENST00000369923 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
SARS-202ENST00000369923 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms