RNA–Protein interactions for RNA: ENST00000245934.11

SYMPK-201, Transcript of symplekin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYMPK, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-201ENST00000245934 NISCHQ9Y2I1 1504 aa24.03■■□□□ 1.44
SYMPK-201ENST00000245934 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
SYMPK-201ENST00000245934 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
SYMPK-201ENST00000245934 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
SYMPK-201ENST00000245934 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.07
SYMPK-201ENST00000245934 FAM9AQ8IZU1 332 aaPredicted RBP21.1■□□□□ 0.97
SYMPK-201ENST00000245934 TTBK1Q5TCY1 1321 aaPredicted RBP20.84■□□□□ 0.93
SYMPK-201ENST00000245934 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
SYMPK-201ENST00000245934 RANGAP1P46060 587 aaPredicted RBP20.59■□□□□ 0.89
SYMPK-201ENST00000245934 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
SYMPK-201ENST00000245934 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
SYMPK-201ENST00000245934 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.86
SYMPK-201ENST00000245934 LOC105371045A0A1W2PR82 267 aa20.27■□□□□ 0.83
SYMPK-201ENST00000245934 APLP2Q06481 763 aa20.17■□□□□ 0.82
SYMPK-201ENST00000245934 ABCC9O60706 1549 aa20.16■□□□□ 0.82
SYMPK-201ENST00000245934 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
SYMPK-201ENST00000245934 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
SYMPK-201ENST00000245934 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
SYMPK-201ENST00000245934 MYT1Q01538 1121 aa20.09■□□□□ 0.81
SYMPK-201ENST00000245934 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
SYMPK-201ENST00000245934 ATP1B4Q9UN42 357 aaPredicted RBP20.01■□□□□ 0.79
SYMPK-201ENST00000245934 CCER1Q8TC90 406 aaPredicted RBP19.9■□□□□ 0.78
SYMPK-201ENST00000245934 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.771e-6■■■□□ 14.8
SYMPK-201ENST00000245934 HRCP23327 699 aa19.64■□□□□ 0.73
SYMPK-201ENST00000245934 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
SYMPK-201ENST00000245934 ITGAEP38570 1179 aa19.6■□□□□ 0.73
SYMPK-201ENST00000245934 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
SYMPK-201ENST00000245934 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
SYMPK-201ENST00000245934 YTHDC1Q96MU7 727 aaKnown RBP19.52■□□□□ 0.71
SYMPK-201ENST00000245934 HNRNPUL2Q1KMD3 747 aaKnown RBP19.51■□□□□ 0.71
SYMPK-201ENST00000245934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.42■□□□□ 0.7
SYMPK-201ENST00000245934 ZEB1P37275 1124 aaPredicted RBP19.4■□□□□ 0.7
SYMPK-201ENST00000245934 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
SYMPK-201ENST00000245934 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
SYMPK-201ENST00000245934 CNGB1Q14028 1251 aaPredicted RBP19.17■□□□□ 0.66
SYMPK-201ENST00000245934 NACADO15069 1562 aa19.1■□□□□ 0.65
SYMPK-201ENST00000245934 RB1CC1Q8TDY2 1594 aa19.07■□□□□ 0.64
SYMPK-201ENST00000245934 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
SYMPK-201ENST00000245934 POLR3GLQ9BT43 218 aa19.01■□□□□ 0.63
SYMPK-201ENST00000245934 P3H3Q8IVL6 736 aa19■□□□□ 0.63
SYMPK-201ENST00000245934 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
SYMPK-201ENST00000245934 ARID3CA6NKF2 412 aa18.95■□□□□ 0.62
SYMPK-201ENST00000245934 FAM50AQ14320 339 aaKnown RBP18.94■□□□□ 0.62
SYMPK-201ENST00000245934 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
SYMPK-201ENST00000245934 MYT1LQ9UL68 1186 aa18.88■□□□□ 0.61
SYMPK-201ENST00000245934 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
SYMPK-201ENST00000245934 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
SYMPK-201ENST00000245934 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
SYMPK-201ENST00000245934 FBLN2P98095 1184 aa18.83■□□□□ 0.6
SYMPK-201ENST00000245934 DIEXFQ68CQ4 756 aaKnown RBP18.83■□□□□ 0.6
SYMPK-201ENST00000245934 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
SYMPK-201ENST00000245934 TRIM52Q96A61 297 aa18.67■□□□□ 0.58
SYMPK-201ENST00000245934 NEFLP07196 543 aa18.66■□□□□ 0.58
SYMPK-201ENST00000245934 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
SYMPK-201ENST00000245934 ZNF326Q5BKZ1 582 aaKnown RBP18.57■□□□□ 0.56
SYMPK-201ENST00000245934 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
SYMPK-201ENST00000245934 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
SYMPK-201ENST00000245934 WIZO95785 1651 aa18.53■□□□□ 0.56
SYMPK-201ENST00000245934 BCANQ96GW7 911 aa18.46■□□□□ 0.55
SYMPK-201ENST00000245934 ZNF777Q9ULD5 760 aaPredicted RBP18.44■□□□□ 0.54
SYMPK-201ENST00000245934 SLC4A1APQ9BWU0 796 aaKnown RBP18.41■□□□□ 0.54
SYMPK-201ENST00000245934 ZNF316A6NFI3 1004 aaPredicted RBP18.41■□□□□ 0.54
SYMPK-201ENST00000245934 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
SYMPK-201ENST00000245934 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
SYMPK-201ENST00000245934 CHIC2Q9UKJ5 165 aa18.34■□□□□ 0.53
SYMPK-201ENST00000245934 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
SYMPK-201ENST00000245934 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
SYMPK-201ENST00000245934 ABCC8Q09428 1581 aa18.27■□□□□ 0.52
SYMPK-201ENST00000245934 WRNQ14191 1432 aaPredicted RBP eCLIP18.24■□□□□ 0.51
SYMPK-201ENST00000245934 TOP2AP11388 1531 aaKnown RBP18.22■□□□□ 0.51
SYMPK-201ENST00000245934 DDX10Q13206 875 aaKnown RBP18.19■□□□□ 0.5
SYMPK-201ENST00000245934 SOGA1O94964 1423 aa18.18■□□□□ 0.5
SYMPK-201ENST00000245934 ANP32CO43423 234 aa18.15■□□□□ 0.5
SYMPK-201ENST00000245934 CLIP1P30622 1438 aa18.15■□□□□ 0.5
SYMPK-201ENST00000245934 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
SYMPK-201ENST00000245934 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
SYMPK-201ENST00000245934 CEP162Q5TB80 1403 aa18.11■□□□□ 0.49
SYMPK-201ENST00000245934 SMARCA2P51531 1590 aa18.08■□□□□ 0.49
SYMPK-201ENST00000245934 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
SYMPK-201ENST00000245934 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
SYMPK-201ENST00000245934 MIER1Q8N108 512 aa18.07■□□□□ 0.48
SYMPK-201ENST00000245934 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
SYMPK-201ENST00000245934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.486e-7■■■□□ 16.6
SYMPK-201ENST00000245934 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
SYMPK-201ENST00000245934 SALL2Q9Y467 1007 aaPredicted RBP18■□□□□ 0.47
SYMPK-201ENST00000245934 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
SYMPK-201ENST00000245934 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
SYMPK-201ENST00000245934 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
SYMPK-201ENST00000245934 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
SYMPK-201ENST00000245934 KDM2AQ9Y2K7 1162 aa17.97■□□□□ 0.47
SYMPK-201ENST00000245934 EEA1Q15075 1411 aa17.96■□□□□ 0.47
SYMPK-201ENST00000245934 MTUS2Q5JR59 1369 aa17.95■□□□□ 0.46
SYMPK-201ENST00000245934 TONSLQ96HA7 1378 aa17.95■□□□□ 0.46
SYMPK-201ENST00000245934 EIF5BO60841 1220 aaKnown RBP17.95■□□□□ 0.46
SYMPK-201ENST00000245934 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
SYMPK-201ENST00000245934 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
SYMPK-201ENST00000245934 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
SYMPK-201ENST00000245934 UNC13AQ9UPW8 1703 aa17.93■□□□□ 0.46
SYMPK-201ENST00000245934 FAM9BQ8IZU0 186 aa17.93■□□□□ 0.46
SYMPK-201ENST00000245934 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms