RNA–Protein interactions for RNA: ENST00000471212.5

TPM2-205, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 1,363 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-205ENST00000471212 NISCHQ9Y2I1 1504 aa42■■■■■ 4.31
TPM2-205ENST00000471212 CCDC180Q9P1Z9 1646 aa37.55■■■■□ 3.6
TPM2-205ENST00000471212 ABCC9O60706 1549 aa37.17■■■■□ 3.54
TPM2-205ENST00000471212 RB1CC1Q8TDY2 1594 aa35.6■■■■□ 3.29
TPM2-205ENST00000471212 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.28
TPM2-205ENST00000471212 NACADO15069 1562 aa35.41■■■■□ 3.26
TPM2-205ENST00000471212 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
TPM2-205ENST00000471212 ZCCHC6Q5VYS8 1495 aaKnown RBP34.88■■■■□ 3.17
TPM2-205ENST00000471212 UNC13AQ9UPW8 1703 aa34.69■■■■□ 3.14
TPM2-205ENST00000471212 PABPN1Q86U42 306 aaKnown RBP eCLIP34.68■■■■□ 3.145e-7■■■□□ 15
TPM2-205ENST00000471212 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
TPM2-205ENST00000471212 BICRAQ9NZM4 1560 aa34.33■■■■□ 3.09
TPM2-205ENST00000471212 SCRIBQ14160 1630 aa34.3■■■■□ 3.08
TPM2-205ENST00000471212 DNAJC5BQ9UF47 199 aa34.26■■■■□ 3.08
TPM2-205ENST00000471212 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
TPM2-205ENST00000471212 EIF4G1Q04637 1599 aaKnown RBP33.58■■■□□ 2.97
TPM2-205ENST00000471212 CC2D2AQ9P2K1 1620 aa33.55■■■□□ 2.96
TPM2-205ENST00000471212 CECR2Q9BXF3 1484 aa33.43■■■□□ 2.94
TPM2-205ENST00000471212 SMARCA4P51532 1647 aa32.7■■■□□ 2.83
TPM2-205ENST00000471212 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
TPM2-205ENST00000471212 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
TPM2-205ENST00000471212 NCAPD3P42695 1498 aa32.6■■■□□ 2.81
TPM2-205ENST00000471212 ATAD2BQ9ULI0 1458 aa32.59■■■□□ 2.81
TPM2-205ENST00000471212 HMGXB3Q12766 1538 aa32.44■■■□□ 2.78
TPM2-205ENST00000471212 BAZ1BQ9UIG0 1483 aaKnown RBP32.42■■■□□ 2.78
TPM2-205ENST00000471212 MROH2BQ7Z745 1585 aa32.34■■■□□ 2.77
TPM2-205ENST00000471212 PEG3Q9GZU2 1588 aa32.29■■■□□ 2.76
TPM2-205ENST00000471212 ERCC6Q03468 1493 aa32.2■■■□□ 2.74
TPM2-205ENST00000471212 WIZO95785 1651 aa32.04■■■□□ 2.72
TPM2-205ENST00000471212 NESP48681 1621 aa31.97■■■□□ 2.71
TPM2-205ENST00000471212 LAMC3Q9Y6N6 1575 aa31.9■■■□□ 2.7
TPM2-205ENST00000471212 CUX2O14529 1486 aa31.85■■■□□ 2.69
TPM2-205ENST00000471212 RSF1Q96T23 1441 aaPredicted RBP31.83■■■□□ 2.69
TPM2-205ENST00000471212 PDS5BQ9NTI5 1447 aa31.76■■■□□ 2.67
TPM2-205ENST00000471212 CADPSQ9ULU8 1353 aa31.7■■■□□ 2.67
TPM2-205ENST00000471212 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
TPM2-205ENST00000471212 KIF21AQ7Z4S6 1674 aa31.64■■■□□ 2.66
TPM2-205ENST00000471212 THOC2Q8NI27 1593 aaKnown RBP31.55■■■□□ 2.64
TPM2-205ENST00000471212 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
TPM2-205ENST00000471212 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
TPM2-205ENST00000471212 CFTRP13569 1480 aa31.38■■■□□ 2.61
TPM2-205ENST00000471212 FANCD2Q9BXW9 1451 aa31.37■■■□□ 2.61
TPM2-205ENST00000471212 CCDC88BA6NC98 1476 aa31.28■■■□□ 2.6
TPM2-205ENST00000471212 DNAJC5Q9H3Z4 198 aa31.28■■■□□ 2.6
TPM2-205ENST00000471212 WDR62O43379 1518 aa31.24■■■□□ 2.59
TPM2-205ENST00000471212 PRDM2Q13029 1718 aa31.22■■■□□ 2.59
TPM2-205ENST00000471212 SUPT5HO00267 1087 aaKnown RBP31.01■■■□□ 2.55
TPM2-205ENST00000471212 URB2Q14146 1524 aaKnown RBP30.99■■■□□ 2.55
TPM2-205ENST00000471212 ABCC8Q09428 1581 aa30.85■■■□□ 2.53
TPM2-205ENST00000471212 TOPBP1Q92547 1522 aa30.79■■■□□ 2.52
TPM2-205ENST00000471212 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
TPM2-205ENST00000471212 IFT140Q96RY7 1462 aa30.74■■■□□ 2.51
TPM2-205ENST00000471212 ZNF608Q9ULD9 1512 aaPredicted RBP30.55■■■□□ 2.48
TPM2-205ENST00000471212 OSCARQ8IYS5 282 aa30.54■■■□□ 2.48
TPM2-205ENST00000471212 POLA1P09884 1462 aaPredicted RBP30.49■■■□□ 2.47
TPM2-205ENST00000471212 EIF4G3O43432 1585 aaKnown RBP30.48■■■□□ 2.47
TPM2-205ENST00000471212 SOGA1O94964 1423 aa30.44■■■□□ 2.46
TPM2-205ENST00000471212 TARBP1Q13395 1621 aaKnown RBP30.42■■■□□ 2.46
TPM2-205ENST00000471212 FGD5Q6ZNL6 1462 aa30.4■■■□□ 2.46
TPM2-205ENST00000471212 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.45
TPM2-205ENST00000471212 RAD54L2Q9Y4B4 1467 aa30.39■■■□□ 2.45
TPM2-205ENST00000471212 CUX1P39880 1505 aa30.38■■■□□ 2.45
TPM2-205ENST00000471212 FBLN2P98095 1184 aa30.32■■■□□ 2.44
TPM2-205ENST00000471212 TRIM41Q8WV44 630 aa30.3■■■□□ 2.44
TPM2-205ENST00000471212 TDRD9Q8NDG6 1382 aaKnown RBP30.29■■■□□ 2.44
TPM2-205ENST00000471212 WDR97A6NE52 1622 aa30.24■■■□□ 2.43
TPM2-205ENST00000471212 CHD1O14646 1710 aa30.19■■■□□ 2.42
TPM2-205ENST00000471212 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
TPM2-205ENST00000471212 SNAPC4Q5SXM2 1469 aa30.12■■■□□ 2.41
TPM2-205ENST00000471212 CHMP7Q8WUX9 453 aaPredicted RBP30.12■■■□□ 2.41
TPM2-205ENST00000471212 GRIN2BQ13224 1484 aa30.11■■■□□ 2.41
TPM2-205ENST00000471212 GAPVD1Q14C86 1478 aa30.07■■■□□ 2.4
TPM2-205ENST00000471212 MAGI1Q96QZ7 1491 aaPredicted RBP30.07■■■□□ 2.4
TPM2-205ENST00000471212 TOP2BQ02880 1626 aa30.06■■■□□ 2.4
TPM2-205ENST00000471212 ABCA10Q8WWZ4 1543 aa30.05■■■□□ 2.4
TPM2-205ENST00000471212 PBRM1Q86U86 1689 aa30.05■■■□□ 2.4
TPM2-205ENST00000471212 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
TPM2-205ENST00000471212 RIMBP3CA6NJZ7 1639 aa30■■■□□ 2.39
TPM2-205ENST00000471212 RIMBP3BA6NNM3 1639 aa30■■■□□ 2.39
TPM2-205ENST00000471212 RIMBP3Q9UFD9 1639 aa30■■■□□ 2.39
TPM2-205ENST00000471212 SYNJ1O43426 1573 aa30■■■□□ 2.39
TPM2-205ENST00000471212 SYNJ2O15056 1496 aa29.95■■■□□ 2.39
TPM2-205ENST00000471212 ARHGEF11O15085 1522 aa29.95■■■□□ 2.38
TPM2-205ENST00000471212 ABCA5Q8WWZ7 1642 aa29.95■■■□□ 2.38
TPM2-205ENST00000471212 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
TPM2-205ENST00000471212 CLASP1Q7Z460 1538 aa29.75■■■□□ 2.35
TPM2-205ENST00000471212 ADAMTS12P58397 1594 aa29.73■■■□□ 2.35
TPM2-205ENST00000471212 ERICH3Q5RHP9 1530 aa29.72■■■□□ 2.35
TPM2-205ENST00000471212 FHAD1B1AJZ9 1412 aa29.7■■■□□ 2.35
TPM2-205ENST00000471212 GRIN2AQ12879 1464 aa29.7■■■□□ 2.34
TPM2-205ENST00000471212 ARAP1Q96P48 1450 aa29.64■■■□□ 2.34
TPM2-205ENST00000471212 KIF27Q86VH2 1401 aa29.59■■■□□ 2.33
TPM2-205ENST00000471212 CEP170Q5SW79 1584 aa29.53■■■□□ 2.32
TPM2-205ENST00000471212 NUP160Q12769 1436 aa29.51■■■□□ 2.31
TPM2-205ENST00000471212 TRHP20396 242 aaPredicted RBP29.48■■■□□ 2.31
TPM2-205ENST00000471212 CUL7Q14999 1698 aa29.43■■■□□ 2.3
TPM2-205ENST00000471212 IGF1RP08069 1367 aa29.38■■■□□ 2.29
TPM2-205ENST00000471212 SHROOM2Q13796 1616 aa29.33■■■□□ 2.29
TPM2-205ENST00000471212 JPH4Q96JJ6 628 aa29.32■■■□□ 2.28
TPM2-205ENST00000471212 PRG4Q92954 1404 aaPredicted RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms