RNA–Protein interactions for RNA: ENST00000360317.7

GSDMB-202, Transcript of gasdermin B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMB, Length 1,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-202ENST00000360317 NISCHQ9Y2I1 1504 aa16.05■□□□□ 0.16
GSDMB-202ENST00000360317 CCDC180Q9P1Z9 1646 aa14.52□□□□□ -0.08
GSDMB-202ENST00000360317 ABCC9O60706 1549 aa14.39□□□□□ -0.11
GSDMB-202ENST00000360317 AEBP2Q6ZN18 517 aaPredicted RBP14.13□□□□□ -0.15
GSDMB-202ENST00000360317 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
GSDMB-202ENST00000360317 NACADO15069 1562 aa13.66□□□□□ -0.22
GSDMB-202ENST00000360317 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
GSDMB-202ENST00000360317 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.26
GSDMB-202ENST00000360317 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
GSDMB-202ENST00000360317 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
GSDMB-202ENST00000360317 BICRAQ9NZM4 1560 aa13.35□□□□□ -0.27
GSDMB-202ENST00000360317 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.282e-7■■■□□ 14.9
GSDMB-202ENST00000360317 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
GSDMB-202ENST00000360317 DCAF1Q9Y4B6 1507 aa13.28□□□□□ -0.28
GSDMB-202ENST00000360317 CHIC1Q5VXU3 224 aa13.25□□□□□ -0.29
GSDMB-202ENST00000360317 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
GSDMB-202ENST00000360317 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
GSDMB-202ENST00000360317 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
GSDMB-202ENST00000360317 EIF4G1Q04637 1599 aaKnown RBP13.02□□□□□ -0.33
GSDMB-202ENST00000360317 CECR2Q9BXF3 1484 aa12.96□□□□□ -0.33
GSDMB-202ENST00000360317 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
GSDMB-202ENST00000360317 SMARCA4P51532 1647 aa12.57□□□□□ -0.4
GSDMB-202ENST00000360317 NCAPD3P42695 1498 aa12.55□□□□□ -0.4
GSDMB-202ENST00000360317 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
GSDMB-202ENST00000360317 HMGXB3Q12766 1538 aa12.52□□□□□ -0.4
GSDMB-202ENST00000360317 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.41
GSDMB-202ENST00000360317 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
GSDMB-202ENST00000360317 PEG3Q9GZU2 1588 aa12.44□□□□□ -0.42
GSDMB-202ENST00000360317 CUX2O14529 1486 aa12.44□□□□□ -0.42
GSDMB-202ENST00000360317 ERCC6Q03468 1493 aa12.43□□□□□ -0.42
GSDMB-202ENST00000360317 BAZ1BQ9UIG0 1483 aaKnown RBP12.42□□□□□ -0.42
GSDMB-202ENST00000360317 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
GSDMB-202ENST00000360317 NESP48681 1621 aa12.36□□□□□ -0.43
GSDMB-202ENST00000360317 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
GSDMB-202ENST00000360317 LAMC3Q9Y6N6 1575 aa12.34□□□□□ -0.43
GSDMB-202ENST00000360317 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
GSDMB-202ENST00000360317 THOC2Q8NI27 1593 aaKnown RBP12.32□□□□□ -0.44
GSDMB-202ENST00000360317 WIZO95785 1651 aa12.26□□□□□ -0.45
GSDMB-202ENST00000360317 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
GSDMB-202ENST00000360317 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
GSDMB-202ENST00000360317 RSF1Q96T23 1441 aaPredicted RBP12.13□□□□□ -0.47
GSDMB-202ENST00000360317 MRC2Q9UBG0 1479 aa12.13□□□□□ -0.47
GSDMB-202ENST00000360317 WDR62O43379 1518 aa12.12□□□□□ -0.47
GSDMB-202ENST00000360317 PRDM2Q13029 1718 aa12.11□□□□□ -0.47
GSDMB-202ENST00000360317 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
GSDMB-202ENST00000360317 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
GSDMB-202ENST00000360317 CFTRP13569 1480 aa12.04□□□□□ -0.48
GSDMB-202ENST00000360317 FANCD2Q9BXW9 1451 aa12.04□□□□□ -0.48
GSDMB-202ENST00000360317 SENP3Q9H4L4 574 aaPredicted RBP11.99□□□□□ -0.49
GSDMB-202ENST00000360317 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
GSDMB-202ENST00000360317 CCDC88BA6NC98 1476 aa11.9□□□□□ -0.5
GSDMB-202ENST00000360317 LOC105371045A0A1W2PR82 267 aa11.89□□□□□ -0.51
GSDMB-202ENST00000360317 HRCP23327 699 aa11.89□□□□□ -0.51
GSDMB-202ENST00000360317 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
GSDMB-202ENST00000360317 TRIM41Q8WV44 630 aa11.83□□□□□ -0.52
GSDMB-202ENST00000360317 PHF23Q9BUL5 403 aaPredicted RBP11.83□□□□□ -0.52
GSDMB-202ENST00000360317 IFT140Q96RY7 1462 aa11.82□□□□□ -0.52
GSDMB-202ENST00000360317 DNMBPQ6XZF7 1577 aa11.82□□□□□ -0.52
GSDMB-202ENST00000360317 ABCC8Q09428 1581 aa11.81□□□□□ -0.52
GSDMB-202ENST00000360317 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
GSDMB-202ENST00000360317 EIF4G3O43432 1585 aaKnown RBP11.8□□□□□ -0.52
GSDMB-202ENST00000360317 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
GSDMB-202ENST00000360317 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
GSDMB-202ENST00000360317 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
GSDMB-202ENST00000360317 CHD1O14646 1710 aa11.76□□□□□ -0.53
GSDMB-202ENST00000360317 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
GSDMB-202ENST00000360317 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
GSDMB-202ENST00000360317 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
GSDMB-202ENST00000360317 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
GSDMB-202ENST00000360317 POLA1P09884 1462 aaPredicted RBP11.69□□□□□ -0.54
GSDMB-202ENST00000360317 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
GSDMB-202ENST00000360317 ARHGEF11O15085 1522 aa11.67□□□□□ -0.54
GSDMB-202ENST00000360317 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.54
GSDMB-202ENST00000360317 FAM9AQ8IZU1 332 aaPredicted RBP11.63□□□□□ -0.55
GSDMB-202ENST00000360317 CUX1P39880 1505 aa11.63□□□□□ -0.55
GSDMB-202ENST00000360317 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
GSDMB-202ENST00000360317 RAD54L2Q9Y4B4 1467 aa11.63□□□□□ -0.55
GSDMB-202ENST00000360317 PBRM1Q86U86 1689 aa11.62□□□□□ -0.55
GSDMB-202ENST00000360317 SOGA1O94964 1423 aa11.61□□□□□ -0.55
GSDMB-202ENST00000360317 SNAPC4Q5SXM2 1469 aa11.58□□□□□ -0.56
GSDMB-202ENST00000360317 MAGI1Q96QZ7 1491 aaPredicted RBP11.57□□□□□ -0.56
GSDMB-202ENST00000360317 TDRD9Q8NDG6 1382 aaKnown RBP11.57□□□□□ -0.56
GSDMB-202ENST00000360317 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
GSDMB-202ENST00000360317 CLASP1Q7Z460 1538 aa11.56□□□□□ -0.56
GSDMB-202ENST00000360317 FBLN2P98095 1184 aa11.55□□□□□ -0.56
GSDMB-202ENST00000360317 GRIN2BQ13224 1484 aa11.54□□□□□ -0.56
GSDMB-202ENST00000360317 ARAP1Q96P48 1450 aa11.54□□□□□ -0.56
GSDMB-202ENST00000360317 ABCA5Q8WWZ7 1642 aa11.54□□□□□ -0.56
GSDMB-202ENST00000360317 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.56
GSDMB-202ENST00000360317 SYNJ2O15056 1496 aa11.51□□□□□ -0.57
GSDMB-202ENST00000360317 BIVM-ERCC5R4GMW8 1640 aa11.51□□□□□ -0.57
GSDMB-202ENST00000360317 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
GSDMB-202ENST00000360317 ABCA10Q8WWZ4 1543 aa11.5□□□□□ -0.57
GSDMB-202ENST00000360317 CYB5RLQ6IPT4 315 aa11.5□□□□□ -0.57
GSDMB-202ENST00000360317 ZEB1P37275 1124 aaPredicted RBP11.49□□□□□ -0.57
GSDMB-202ENST00000360317 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
GSDMB-202ENST00000360317 EEA1Q15075 1411 aa11.47□□□□□ -0.57
GSDMB-202ENST00000360317 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
GSDMB-202ENST00000360317 EHMT2Q96KQ7 1210 aa11.44□□□□□ -0.58
GSDMB-202ENST00000360317 ADAMTS12P58397 1594 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms