RNA–Protein interactions for RNA: ENST00000520542.5

GSDMB-212, Transcript of gasdermin B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GSDMB, Length 1,546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-212ENST00000520542 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
GSDMB-212ENST00000520542 CCDC180Q9P1Z9 1646 aa23.64■■□□□ 1.37
GSDMB-212ENST00000520542 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
GSDMB-212ENST00000520542 ABCC9O60706 1549 aa22.41■■□□□ 1.18
GSDMB-212ENST00000520542 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
GSDMB-212ENST00000520542 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
GSDMB-212ENST00000520542 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.14
GSDMB-212ENST00000520542 NACADO15069 1562 aa22.04■■□□□ 1.12
GSDMB-212ENST00000520542 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
GSDMB-212ENST00000520542 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
GSDMB-212ENST00000520542 SCRIBQ14160 1630 aa21.68■■□□□ 1.06
GSDMB-212ENST00000520542 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
GSDMB-212ENST00000520542 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
GSDMB-212ENST00000520542 PABPN1Q86U42 306 aaKnown RBP eCLIP21.09■□□□□ 0.972e-7■■■□□ 14.9
GSDMB-212ENST00000520542 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
GSDMB-212ENST00000520542 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
GSDMB-212ENST00000520542 RSF1Q96T23 1441 aaPredicted RBP20.89■□□□□ 0.93
GSDMB-212ENST00000520542 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
GSDMB-212ENST00000520542 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
GSDMB-212ENST00000520542 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
GSDMB-212ENST00000520542 WIZO95785 1651 aa20.67■□□□□ 0.9
GSDMB-212ENST00000520542 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
GSDMB-212ENST00000520542 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
GSDMB-212ENST00000520542 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
GSDMB-212ENST00000520542 TOP2AP11388 1531 aaKnown RBP20.47■□□□□ 0.87
GSDMB-212ENST00000520542 SMARCA2P51531 1590 aa20.47■□□□□ 0.87
GSDMB-212ENST00000520542 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
GSDMB-212ENST00000520542 NCAPD3P42695 1498 aa20.33■□□□□ 0.84
GSDMB-212ENST00000520542 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
GSDMB-212ENST00000520542 CC2D2AQ9P2K1 1620 aa20.3■□□□□ 0.84
GSDMB-212ENST00000520542 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
GSDMB-212ENST00000520542 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
GSDMB-212ENST00000520542 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
GSDMB-212ENST00000520542 CFTRP13569 1480 aa19.84■□□□□ 0.77
GSDMB-212ENST00000520542 CADPSQ9ULU8 1353 aa19.79■□□□□ 0.76
GSDMB-212ENST00000520542 TRIM41Q8WV44 630 aa19.77■□□□□ 0.76
GSDMB-212ENST00000520542 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
GSDMB-212ENST00000520542 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
GSDMB-212ENST00000520542 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
GSDMB-212ENST00000520542 LAMC3Q9Y6N6 1575 aa19.67■□□□□ 0.74
GSDMB-212ENST00000520542 NESP48681 1621 aa19.63■□□□□ 0.73
GSDMB-212ENST00000520542 SYNJ1O43426 1573 aa19.59■□□□□ 0.73
GSDMB-212ENST00000520542 FANCD2Q9BXW9 1451 aa19.57■□□□□ 0.72
GSDMB-212ENST00000520542 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
GSDMB-212ENST00000520542 BIVM-ERCC5R4GMW8 1640 aa19.53■□□□□ 0.72
GSDMB-212ENST00000520542 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.71
GSDMB-212ENST00000520542 CUX1P39880 1505 aa19.5■□□□□ 0.71
GSDMB-212ENST00000520542 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
GSDMB-212ENST00000520542 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
GSDMB-212ENST00000520542 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
GSDMB-212ENST00000520542 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
GSDMB-212ENST00000520542 SOGA1O94964 1423 aa19.36■□□□□ 0.69
GSDMB-212ENST00000520542 EEA1Q15075 1411 aa19.35■□□□□ 0.69
GSDMB-212ENST00000520542 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
GSDMB-212ENST00000520542 URB2Q14146 1524 aaKnown RBP19.32■□□□□ 0.68
GSDMB-212ENST00000520542 FGD5Q6ZNL6 1462 aa19.31■□□□□ 0.68
GSDMB-212ENST00000520542 RUSC2Q8N2Y8 1516 aa19.29■□□□□ 0.68
GSDMB-212ENST00000520542 MRC2Q9UBG0 1479 aa19.27■□□□□ 0.68
GSDMB-212ENST00000520542 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
GSDMB-212ENST00000520542 LOC105371045A0A1W2PR82 267 aa19.25■□□□□ 0.67
GSDMB-212ENST00000520542 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
GSDMB-212ENST00000520542 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
GSDMB-212ENST00000520542 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
GSDMB-212ENST00000520542 WDR62O43379 1518 aa19.18■□□□□ 0.66
GSDMB-212ENST00000520542 CUX2O14529 1486 aa19.16■□□□□ 0.66
GSDMB-212ENST00000520542 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
GSDMB-212ENST00000520542 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
GSDMB-212ENST00000520542 THOC2Q8NI27 1593 aaKnown RBP19.14■□□□□ 0.65
GSDMB-212ENST00000520542 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
GSDMB-212ENST00000520542 KIF21BO75037 1637 aa19.1■□□□□ 0.65
GSDMB-212ENST00000520542 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
GSDMB-212ENST00000520542 TARBP1Q13395 1621 aaKnown RBP19.06■□□□□ 0.64
GSDMB-212ENST00000520542 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
GSDMB-212ENST00000520542 PRXQ9BXM0 1461 aa19.03■□□□□ 0.64
GSDMB-212ENST00000520542 IFT140Q96RY7 1462 aa19.02■□□□□ 0.64
GSDMB-212ENST00000520542 IGF1RP08069 1367 aa19.02■□□□□ 0.63
GSDMB-212ENST00000520542 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
GSDMB-212ENST00000520542 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
GSDMB-212ENST00000520542 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
GSDMB-212ENST00000520542 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
GSDMB-212ENST00000520542 TNIKQ9UKE5 1360 aa18.97■□□□□ 0.63
GSDMB-212ENST00000520542 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
GSDMB-212ENST00000520542 UBTFP17480 764 aaKnown RBP18.95■□□□□ 0.62
GSDMB-212ENST00000520542 CARMIL1Q5VZK9 1371 aa18.93■□□□□ 0.62
GSDMB-212ENST00000520542 CUL7Q14999 1698 aa18.92■□□□□ 0.62
GSDMB-212ENST00000520542 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.61
GSDMB-212ENST00000520542 PBRM1Q86U86 1689 aa18.88■□□□□ 0.61
GSDMB-212ENST00000520542 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
GSDMB-212ENST00000520542 GRIN2BQ13224 1484 aa18.85■□□□□ 0.61
GSDMB-212ENST00000520542 CEP162Q5TB80 1403 aa18.84■□□□□ 0.61
GSDMB-212ENST00000520542 EIF4G3O43432 1585 aaKnown RBP18.84■□□□□ 0.61
GSDMB-212ENST00000520542 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
GSDMB-212ENST00000520542 ADAMTS12P58397 1594 aa18.77■□□□□ 0.6
GSDMB-212ENST00000520542 CLIP1P30622 1438 aa18.74■□□□□ 0.59
GSDMB-212ENST00000520542 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
GSDMB-212ENST00000520542 MAGI1Q96QZ7 1491 aaPredicted RBP18.7■□□□□ 0.58
GSDMB-212ENST00000520542 CTTNBP2Q8WZ74 1663 aa18.68■□□□□ 0.58
GSDMB-212ENST00000520542 RANGAP1P46060 587 aaPredicted RBP18.66■□□□□ 0.58
GSDMB-212ENST00000520542 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
GSDMB-212ENST00000520542 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms