RNA–Protein interactions for RNA: ENST00000552688.5

CS-233, Transcript of citrate synthase, humanhuman

TSL 4

Gene CS, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CS-233ENST00000552688 NISCHQ9Y2I1 1504 aa17.23■□□□□ 0.35
CS-233ENST00000552688 ABCC9O60706 1549 aa15.65■□□□□ 0.1
CS-233ENST00000552688 CCDC180Q9P1Z9 1646 aa15.48■□□□□ 0.07
CS-233ENST00000552688 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
CS-233ENST00000552688 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
CS-233ENST00000552688 NACADO15069 1562 aa14.74□□□□□ -0.05
CS-233ENST00000552688 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
CS-233ENST00000552688 PABPN1Q86U42 306 aaKnown RBP eCLIP14.59□□□□□ -0.072e-8■■■□□ 14.8
CS-233ENST00000552688 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.08
CS-233ENST00000552688 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
CS-233ENST00000552688 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
CS-233ENST00000552688 SHROOM4Q9ULL8 1493 aa14.28□□□□□ -0.12
CS-233ENST00000552688 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
CS-233ENST00000552688 ZCCHC6Q5VYS8 1495 aaKnown RBP14.23□□□□□ -0.13
CS-233ENST00000552688 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
CS-233ENST00000552688 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
CS-233ENST00000552688 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
CS-233ENST00000552688 SCRIBQ14160 1630 aa14.06□□□□□ -0.16
CS-233ENST00000552688 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
CS-233ENST00000552688 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
CS-233ENST00000552688 CUX2O14529 1486 aa13.62□□□□□ -0.23
CS-233ENST00000552688 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
CS-233ENST00000552688 ATAD2BQ9ULI0 1458 aa13.54□□□□□ -0.24
CS-233ENST00000552688 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CS-233ENST00000552688 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
CS-233ENST00000552688 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
CS-233ENST00000552688 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
CS-233ENST00000552688 BAZ1AQ9NRL2 1556 aaPredicted RBP13.39□□□□□ -0.27
CS-233ENST00000552688 NESP48681 1621 aa13.38□□□□□ -0.27
CS-233ENST00000552688 PEG3Q9GZU2 1588 aa13.34□□□□□ -0.27
CS-233ENST00000552688 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
CS-233ENST00000552688 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
CS-233ENST00000552688 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
CS-233ENST00000552688 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
CS-233ENST00000552688 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
CS-233ENST00000552688 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
CS-233ENST00000552688 KIF21AQ7Z4S6 1674 aa13.13□□□□□ -0.31
CS-233ENST00000552688 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
CS-233ENST00000552688 WDR62O43379 1518 aa13.09□□□□□ -0.31
CS-233ENST00000552688 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
CS-233ENST00000552688 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
CS-233ENST00000552688 FANCD2Q9BXW9 1451 aa13.03□□□□□ -0.32
CS-233ENST00000552688 WIZO95785 1651 aa13.02□□□□□ -0.32
CS-233ENST00000552688 CFTRP13569 1480 aa13.02□□□□□ -0.33
CS-233ENST00000552688 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.34
CS-233ENST00000552688 TOP2AP11388 1531 aaKnown RBP12.91□□□□□ -0.34
CS-233ENST00000552688 URB2Q14146 1524 aaKnown RBP12.89□□□□□ -0.35
CS-233ENST00000552688 IFT140Q96RY7 1462 aa12.83□□□□□ -0.36
CS-233ENST00000552688 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
CS-233ENST00000552688 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
CS-233ENST00000552688 ZNF608Q9ULD9 1512 aaPredicted RBP12.76□□□□□ -0.37
CS-233ENST00000552688 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
CS-233ENST00000552688 PRDM2Q13029 1718 aa12.72□□□□□ -0.37
CS-233ENST00000552688 RIMBP3CA6NJZ7 1639 aa12.72□□□□□ -0.37
CS-233ENST00000552688 RIMBP3BA6NNM3 1639 aa12.72□□□□□ -0.37
CS-233ENST00000552688 RIMBP3Q9UFD9 1639 aa12.72□□□□□ -0.37
CS-233ENST00000552688 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
CS-233ENST00000552688 CYB5RLQ6IPT4 315 aa12.7□□□□□ -0.38
CS-233ENST00000552688 DNMBPQ6XZF7 1577 aa12.68□□□□□ -0.38
CS-233ENST00000552688 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.382e-12■■■■□ 25.6
CS-233ENST00000552688 FBLN2P98095 1184 aa12.65□□□□□ -0.38
CS-233ENST00000552688 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
CS-233ENST00000552688 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
CS-233ENST00000552688 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
CS-233ENST00000552688 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
CS-233ENST00000552688 SOGA1O94964 1423 aa12.6□□□□□ -0.39
CS-233ENST00000552688 ARAP1Q96P48 1450 aa12.57□□□□□ -0.4
CS-233ENST00000552688 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
CS-233ENST00000552688 CHMP7Q8WUX9 453 aaPredicted RBP12.56□□□□□ -0.4
CS-233ENST00000552688 RAD54L2Q9Y4B4 1467 aa12.55□□□□□ -0.4
CS-233ENST00000552688 CHD1O14646 1710 aa12.54□□□□□ -0.4
CS-233ENST00000552688 WDR97A6NE52 1622 aa12.53□□□□□ -0.4
CS-233ENST00000552688 MAGI1Q96QZ7 1491 aaPredicted RBP12.51□□□□□ -0.41
CS-233ENST00000552688 GRIN2BQ13224 1484 aa12.5□□□□□ -0.41
CS-233ENST00000552688 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
CS-233ENST00000552688 FGD5Q6ZNL6 1462 aa12.5□□□□□ -0.41
CS-233ENST00000552688 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
CS-233ENST00000552688 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
CS-233ENST00000552688 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
CS-233ENST00000552688 CUX1P39880 1505 aa12.45□□□□□ -0.42
CS-233ENST00000552688 GAPVD1Q14C86 1478 aa12.42□□□□□ -0.42
CS-233ENST00000552688 ABCA10Q8WWZ4 1543 aa12.38□□□□□ -0.43
CS-233ENST00000552688 AEBP2Q6ZN18 517 aaPredicted RBP12.38□□□□□ -0.43
CS-233ENST00000552688 WRNQ14191 1432 aaPredicted RBP eCLIP12.34□□□□□ -0.43
CS-233ENST00000552688 ABCA5Q8WWZ7 1642 aa12.31□□□□□ -0.44
CS-233ENST00000552688 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
CS-233ENST00000552688 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
CS-233ENST00000552688 NUP160Q12769 1436 aa12.29□□□□□ -0.44
CS-233ENST00000552688 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
CS-233ENST00000552688 SUPT5HO00267 1087 aaKnown RBP12.27□□□□□ -0.45
CS-233ENST00000552688 CEP170Q5SW79 1584 aa12.24□□□□□ -0.45
CS-233ENST00000552688 ADAMTS12P58397 1594 aa12.22□□□□□ -0.45
CS-233ENST00000552688 ERICH3Q5RHP9 1530 aa12.22□□□□□ -0.45
CS-233ENST00000552688 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
CS-233ENST00000552688 ERCC6L2Q5T890 1561 aa12.22□□□□□ -0.45
CS-233ENST00000552688 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
CS-233ENST00000552688 PRG4Q92954 1404 aaPredicted RBP12.2□□□□□ -0.46
CS-233ENST00000552688 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
CS-233ENST00000552688 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
CS-233ENST00000552688 BIVM-ERCC5R4GMW8 1640 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms