RNA–Protein interactions for RNA: ENST00000234677.6

SARS-201, Transcript of seryl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SARS, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS-201ENST00000234677 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
SARS-201ENST00000234677 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.91
SARS-201ENST00000234677 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
SARS-201ENST00000234677 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
SARS-201ENST00000234677 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.66
SARS-201ENST00000234677 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
SARS-201ENST00000234677 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
SARS-201ENST00000234677 ABCC9O60706 1549 aa25.2■■□□□ 1.63
SARS-201ENST00000234677 NACADO15069 1562 aa25.02■■□□□ 1.6
SARS-201ENST00000234677 SCRIBQ14160 1630 aa24.78■■□□□ 1.56
SARS-201ENST00000234677 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
SARS-201ENST00000234677 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
SARS-201ENST00000234677 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
SARS-201ENST00000234677 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
SARS-201ENST00000234677 CECR2Q9BXF3 1484 aa24.02■■□□□ 1.44
SARS-201ENST00000234677 BICRAQ9NZM4 1560 aa23.98■■□□□ 1.43
SARS-201ENST00000234677 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
SARS-201ENST00000234677 BAZ1AQ9NRL2 1556 aaPredicted RBP23.92■■□□□ 1.42
SARS-201ENST00000234677 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
SARS-201ENST00000234677 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.392e-7■■■□□ 14.8
SARS-201ENST00000234677 WIZO95785 1651 aa23.75■■□□□ 1.39
SARS-201ENST00000234677 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
SARS-201ENST00000234677 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
SARS-201ENST00000234677 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
SARS-201ENST00000234677 SMARCA2P51531 1590 aa23.33■■□□□ 1.33
SARS-201ENST00000234677 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
SARS-201ENST00000234677 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
SARS-201ENST00000234677 EIF4G1Q04637 1599 aaKnown RBP23.25■■□□□ 1.31
SARS-201ENST00000234677 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
SARS-201ENST00000234677 HMGXB3Q12766 1538 aa23.1■■□□□ 1.29
SARS-201ENST00000234677 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
SARS-201ENST00000234677 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
SARS-201ENST00000234677 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
SARS-201ENST00000234677 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
SARS-201ENST00000234677 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
SARS-201ENST00000234677 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
SARS-201ENST00000234677 LOC105371045A0A1W2PR82 267 aa22.65■■□□□ 1.22
SARS-201ENST00000234677 CFTRP13569 1480 aa22.63■■□□□ 1.21
SARS-201ENST00000234677 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
SARS-201ENST00000234677 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
SARS-201ENST00000234677 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
SARS-201ENST00000234677 EEA1Q15075 1411 aa22.52■■□□□ 1.2
SARS-201ENST00000234677 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
SARS-201ENST00000234677 BIVM-ERCC5R4GMW8 1640 aa22.49■■□□□ 1.19
SARS-201ENST00000234677 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
SARS-201ENST00000234677 SOGA1O94964 1423 aa22.45■■□□□ 1.18
SARS-201ENST00000234677 CUX1P39880 1505 aa22.37■■□□□ 1.17
SARS-201ENST00000234677 RUSC2Q8N2Y8 1516 aa22.34■■□□□ 1.17
SARS-201ENST00000234677 CSRNP3Q8WYN3 585 aa22.3■■□□□ 1.16
SARS-201ENST00000234677 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
SARS-201ENST00000234677 FANCD2Q9BXW9 1451 aa22.25■■□□□ 1.15
SARS-201ENST00000234677 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
SARS-201ENST00000234677 KIF21BO75037 1637 aa22.22■■□□□ 1.15
SARS-201ENST00000234677 GOLGA3Q08378 1498 aa22.21■■□□□ 1.15
SARS-201ENST00000234677 NESP48681 1621 aa22.2■■□□□ 1.14
SARS-201ENST00000234677 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
SARS-201ENST00000234677 TNIKQ9UKE5 1360 aa22.16■■□□□ 1.14
SARS-201ENST00000234677 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
SARS-201ENST00000234677 KIF27Q86VH2 1401 aa22.1■■□□□ 1.13
SARS-201ENST00000234677 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
SARS-201ENST00000234677 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
SARS-201ENST00000234677 CEP162Q5TB80 1403 aa22.07■■□□□ 1.12
SARS-201ENST00000234677 TOPBP1Q92547 1522 aa22.04■■□□□ 1.12
SARS-201ENST00000234677 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
SARS-201ENST00000234677 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
SARS-201ENST00000234677 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
SARS-201ENST00000234677 RAPGEF2Q9Y4G8 1499 aa22■■□□□ 1.11
SARS-201ENST00000234677 CUX2O14529 1486 aa21.98■■□□□ 1.11
SARS-201ENST00000234677 KIF21AQ7Z4S6 1674 aa21.97■■□□□ 1.11
SARS-201ENST00000234677 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
SARS-201ENST00000234677 POLA1P09884 1462 aaPredicted RBP21.95■■□□□ 1.11
SARS-201ENST00000234677 ABCA10Q8WWZ4 1543 aa21.92■■□□□ 1.1
SARS-201ENST00000234677 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
SARS-201ENST00000234677 TRIM26Q12899 539 aaPredicted RBP21.86■■□□□ 1.09
SARS-201ENST00000234677 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
SARS-201ENST00000234677 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
SARS-201ENST00000234677 IGF1RP08069 1367 aa21.84■■□□□ 1.09
SARS-201ENST00000234677 CLIP1P30622 1438 aa21.84■■□□□ 1.09
SARS-201ENST00000234677 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
SARS-201ENST00000234677 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
SARS-201ENST00000234677 CUL7Q14999 1698 aa21.73■■□□□ 1.07
SARS-201ENST00000234677 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
SARS-201ENST00000234677 TARBP1Q13395 1621 aaKnown RBP21.7■■□□□ 1.07
SARS-201ENST00000234677 VPS8Q8N3P4 1428 aa21.7■■□□□ 1.06
SARS-201ENST00000234677 WDR62O43379 1518 aa21.68■■□□□ 1.06
SARS-201ENST00000234677 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.05
SARS-201ENST00000234677 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
SARS-201ENST00000234677 ARAP1Q96P48 1450 aa21.61■■□□□ 1.05
SARS-201ENST00000234677 TDRD9Q8NDG6 1382 aaKnown RBP21.6■■□□□ 1.05
SARS-201ENST00000234677 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
SARS-201ENST00000234677 IFT140Q96RY7 1462 aa21.56■■□□□ 1.04
SARS-201ENST00000234677 PPARGC1BQ86YN6 1023 aaKnown RBP21.56■■□□□ 1.04
SARS-201ENST00000234677 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
SARS-201ENST00000234677 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
SARS-201ENST00000234677 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
SARS-201ENST00000234677 CTTNBP2Q8WZ74 1663 aa21.52■■□□□ 1.04
SARS-201ENST00000234677 HRCP23327 699 aa21.48■■□□□ 1.03
SARS-201ENST00000234677 GRIN2BQ13224 1484 aa21.45■■□□□ 1.02
SARS-201ENST00000234677 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
SARS-201ENST00000234677 EFCAB5A4FU69 1503 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms