Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 SLC25A39-214ENST00000591151 636 ntTSL 212.92□□□□□ -0.342e-6■■■■□ 22.1
NCBP2P52298 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.377e-6■■■■□ 22.1
NCBP2P52298 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.397e-6■■■■□ 22.1
NCBP2P52298 CRTC2-207ENST00000487235 2263 ntTSL 212.58□□□□□ -0.47e-7■■■■□ 22.1
NCBP2P52298 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.39□□□□□ -0.437e-6■■■■□ 22.1
NCBP2P52298 HDLBP-210ENST00000423693 544 ntTSL 512.02□□□□□ -0.494e-8■■■■□ 22.1
NCBP2P52298 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.492e-8■■■■□ 22.1
NCBP2P52298 MCFD2-215ENST00000479225 568 ntTSL 311.9□□□□□ -0.57e-6■■■■□ 22.1
NCBP2P52298 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC11.72□□□□□ -0.532e-8■■■■□ 22.1
NCBP2P52298 AFMID-212ENST00000591256 631 ntTSL 411.6□□□□□ -0.554e-20■■■■□ 22.1
NCBP2P52298 HDLBP-246ENST00000496569 374 ntTSL 411.18□□□□□ -0.624e-8■■■■□ 22.1
NCBP2P52298 TIMM10B-203ENST00000530751 809 ntTSL 2 BASIC11.13□□□□□ -0.639e-7■■■■□ 22.1
NCBP2P52298 TIMM10B-201ENST00000254616 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.719e-7■■■■□ 22.1
NCBP2P52298 AFMID-206ENST00000587750 541 ntTSL 310.28□□□□□ -0.767e-6■■■■□ 22.1
NCBP2P52298 AFMID-204ENST00000586542 569 ntTSL 410.28□□□□□ -0.764e-20■■■■□ 22.1
NCBP2P52298 AFMID-207ENST00000588199 778 ntTSL 510.28□□□□□ -0.764e-20■■■■□ 22.1
NCBP2P52298 TIMM10B-205ENST00000533379 608 ntTSL 210.21□□□□□ -0.779e-7■■■■□ 22.1
NCBP2P52298 AC084337.2-202ENST00000640959 595 ntAPPRIS P5 TSL 4 BASIC10.2□□□□□ -0.789e-7■■■■□ 22.1
NCBP2P52298 AC084337.2-201ENST00000639224 589 ntAPPRIS ALT2 TSL 410.14□□□□□ -0.799e-7■■■■□ 22.1
NCBP2P52298 AFMID-202ENST00000409257 1730 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.84e-20■■■■□ 22.1
NCBP2P52298 AFMID-208ENST00000588800 647 ntTSL 2 BASIC9.99□□□□□ -0.814e-20■■■■□ 22.1
NCBP2P52298 AFMID-211ENST00000589664 754 ntTSL 59.95□□□□□ -0.827e-6■■■■□ 22.1
NCBP2P52298 HDLBP-207ENST00000420451 559 ntTSL 49.69□□□□□ -0.864e-8■■■■□ 22.1
NCBP2P52298 HDLBP-216ENST00000428482 1096 ntTSL 59.38□□□□□ -0.914e-8■■■■□ 22.1
NCBP2P52298 HDLBP-206ENST00000417540 525 ntTSL 49.38□□□□□ -0.914e-8■■■■□ 22.1
NCBP2P52298 HDLBP-205ENST00000413241 581 ntTSL 59.35□□□□□ -0.914e-8■■■■□ 22.1
NCBP2P52298 HDLBP-230ENST00000462130 464 ntTSL 49.18□□□□□ -0.944e-8■■■■□ 22.1
NCBP2P52298 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC9.1□□□□□ -0.957e-6■■■■□ 22.1
NCBP2P52298 HDLBP-211ENST00000425989 530 ntTSL 59.06□□□□□ -0.964e-8■■■■□ 22.1
NCBP2P52298 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.994e-8■■■■□ 22.1
NCBP2P52298 AFMID-203ENST00000585419 493 ntTSL 38.85□□□□□ -0.997e-6■■■■□ 22.1
NCBP2P52298 RETREG3-211ENST00000591547 564 ntTSL 48.8□□□□□ -12e-8■■■■□ 22.1
NCBP2P52298 AFMID-214ENST00000591952 582 ntTSL 2 BASIC8.79□□□□□ -14e-20■■■■□ 22.1
NCBP2P52298 BANF1-207ENST00000530204 586 ntTSL 58.65□□□□□ -1.027e-6■■■■□ 22.1
NCBP2P52298 TIMM10B-204ENST00000531462 516 ntTSL 38.53□□□□□ -1.049e-7■■■■□ 22.1
NCBP2P52298 BANF1-204ENST00000524663 251 ntTSL 38.28□□□□□ -1.087e-6■■■■□ 22.1
NCBP2P52298 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.66□□□□□ -1.187e-6■■■■□ 22.1
NCBP2P52298 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.257e-6■■■■□ 22.1
NCBP2P52298 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.287e-6■■■■□ 22.1
NCBP2P52298 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.357e-6■■■■□ 22.1
NCBP2P52298 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.387e-6■■■■□ 22.1
NCBP2P52298 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.21□□□□□ -1.417e-6■■■■□ 22.1
NCBP2P52298 PBRM1-212ENST00000424867 457 ntTSL 55.76□□□□□ -1.497e-6■■■■□ 22.1
NCBP2P52298 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.517e-6■■■■□ 22.1
NCBP2P52298 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.027e-6■■■■□ 22.1
NCBP2P52298 CCDC183-206ENST00000484858 422 ntTSL 317.64■□□□□ 0.416e-12■■■■□ 22.1
NCBP2P52298 CCDC183-207ENST00000496839 744 ntTSL 514.14□□□□□ -0.156e-12■■■■□ 22.1
NCBP2P52298 DOT1L-203ENST00000452696 624 ntTSL 313.56□□□□□ -0.246e-12■■■■□ 22.1
NCBP2P52298 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.446e-12■■■■□ 22.1
NCBP2P52298 DOT1L-205ENST00000478937 638 ntTSL 312.25□□□□□ -0.456e-12■■■■□ 22.1
NCBP2P52298 HNRNPH1-221ENST00000513230 248 ntTSL 321.36■■□□□ 1.018e-34■■■■□ 22.1
NCBP2P52298 HNRNPH1-242ENST00000522256 492 ntTSL 414.01□□□□□ -0.178e-34■■■■□ 22.1
NCBP2P52298 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.16■□□□□ 0.55e-16■■■■□ 22.1
NCBP2P52298 CYC1-204ENST00000533444 1832 ntTSL 1 (best)25.33■■□□□ 1.652e-8■■■■□ 22.1
NCBP2P52298 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.752e-8■■■■□ 22.1
NCBP2P52298 RPRD2-204ENST00000492220 4780 ntTSL 511.8□□□□□ -0.522e-7■■■■□ 22.1
NCBP2P52298 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.69□□□□□ -1.661e-10■■■■□ 22
NCBP2P52298 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.124e-6■■■■□ 22
NCBP2P52298 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.054e-6■■■■□ 22
NCBP2P52298 SFSWAP-204ENST00000535399 778 ntTSL 221.01■□□□□ 0.958e-14■■■■□ 21.9
NCBP2P52298 SFSWAP-203ENST00000535236 5593 ntTSL 1 (best)17.88■□□□□ 0.458e-14■■■■□ 21.9
NCBP2P52298 SFSWAP-207ENST00000538548 2636 ntTSL 517.26■□□□□ 0.358e-14■■■■□ 21.9
NCBP2P52298 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.228e-14■■■■□ 21.9
NCBP2P52298 SFSWAP-209ENST00000540469 3536 ntTSL 312□□□□□ -0.498e-14■■■■□ 21.9
NCBP2P52298 PQLC1-212ENST00000590895 865 ntTSL 315.15■□□□□ 0.023e-7■■■■□ 21.9
NCBP2P52298 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.98■□□□□ 0.153e-17■■■■□ 21.8
NCBP2P52298 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC10.14□□□□□ -0.793e-17■■■■□ 21.8
NCBP2P52298 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC9.7□□□□□ -0.863e-17■■■■□ 21.8
NCBP2P52298 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC9.18□□□□□ -0.943e-17■■■■□ 21.8
NCBP2P52298 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.973e-17■■■■□ 21.8
NCBP2P52298 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.09□□□□□ -1.113e-17■■■■□ 21.8
NCBP2P52298 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.263e-17■■■■□ 21.8
NCBP2P52298 EPB41-213ENST00000636666 3642 ntTSL 56.37□□□□□ -1.393e-17■■■■□ 21.8
NCBP2P52298 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.76■□□□□ 0.752e-7■■■■□ 21.7
NCBP2P52298 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.572e-7■■■■□ 21.7
NCBP2P52298 ACADVL-206ENST00000577191 1212 ntTSL 218.06■□□□□ 0.482e-7■■■■□ 21.7
NCBP2P52298 ACADVL-201ENST00000322910 2352 ntTSL 217.69■□□□□ 0.422e-7■■■■□ 21.7
NCBP2P52298 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.17■□□□□ 0.342e-7■■■■□ 21.7
NCBP2P52298 AP1G2-226ENST00000556843 562 ntTSL 412.94□□□□□ -0.347e-7■■■■□ 21.7
NCBP2P52298 LZTS2-205ENST00000454422 804 ntTSL 228.37■■■□□ 2.133e-6■■■■□ 21.7
NCBP2P52298 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.95e-8■■■■□ 21.7
NCBP2P52298 DCAKD-207ENST00000593094 1000 ntTSL 225.68■■□□□ 1.73e-6■■■■□ 21.7
NCBP2P52298 FAAH-202ENST00000468718 769 ntTSL 325.09■■□□□ 1.613e-6■■■■□ 21.7
NCBP2P52298 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.453e-6■■■■□ 21.7
NCBP2P52298 FAAH-206ENST00000493735 1396 ntTSL 524.11■■□□□ 1.453e-6■■■■□ 21.7
NCBP2P52298 ADARB1-207ENST00000460734 2523 ntTSL 1 (best)23.54■■□□□ 1.361e-6■■■■□ 21.7
NCBP2P52298 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.51■■□□□ 1.353e-6■■■■□ 21.7
NCBP2P52298 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.23■■□□□ 1.313e-6■■■■□ 21.7
NCBP2P52298 RAPGEF1-206ENST00000438647 588 ntTSL 322.75■■□□□ 1.233e-6■■■■□ 21.7
NCBP2P52298 NOL4L-209ENST00000485364 885 ntTSL 1 (best)21.72■■□□□ 1.073e-6■■■■□ 21.7
NCBP2P52298 NOL4L-201ENST00000201961 971 ntAPPRIS ALT2 TSL 321.6■■□□□ 1.053e-6■■■■□ 21.7
NCBP2P52298 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.043e-6■■■■□ 21.7
NCBP2P52298 PRKCZ-201ENST00000378567 2326 ntAPPRIS P1 TSL 1 (best)21.29■■□□□ 13e-6■■■■□ 21.7
NCBP2P52298 GATA2-AS1-203ENST00000473958 722 ntTSL 320.97■□□□□ 0.953e-6■■■■□ 21.7
NCBP2P52298 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.93■□□□□ 0.941e-6■■■■□ 21.7
NCBP2P52298 ADARB1-203ENST00000389861 5031 ntTSL 1 (best)20.93■□□□□ 0.941e-6■■■■□ 21.7
NCBP2P52298 ADARB1-212ENST00000496664 5033 ntTSL 1 (best)20.93■□□□□ 0.941e-6■■■■□ 21.7
NCBP2P52298 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.73■□□□□ 0.913e-6■■■■□ 21.7
NCBP2P52298 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.64■□□□□ 0.893e-6■■■■□ 21.7
NCBP2P52298 ADARB1-211ENST00000492414 4913 ntTSL 1 (best)19.98■□□□□ 0.791e-6■■■■□ 21.7
Retrieved 100 of 18,329 protein–RNA pairs in 282.8 ms