RNA–Protein interactions for RNA: ENST00000577191.5

ACADVL-206, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2

Gene ACADVL, Length 1,212 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-206ENST00000577191 NISCHQ9Y2I1 1504 aa48.07■■■■■ 5.29
ACADVL-206ENST00000577191 CCDC180Q9P1Z9 1646 aa42.92■■■■■ 4.46
ACADVL-206ENST00000577191 ABCC9O60706 1549 aa42.29■■■■■ 4.36
ACADVL-206ENST00000577191 RB1CC1Q8TDY2 1594 aa40.57■■■■■ 4.08
ACADVL-206ENST00000577191 NACADO15069 1562 aa40.43■■■■■ 4.06
ACADVL-206ENST00000577191 DCAF8L2P0C7V8 631 aa40.32■■■■■ 4.05
ACADVL-206ENST00000577191 MYO15BQ96JP2 1530 aa40.06■■■■■ 4
ACADVL-206ENST00000577191 ZCCHC6Q5VYS8 1495 aaKnown RBP39.96■■■■□ 3.99
ACADVL-206ENST00000577191 DCAF1Q9Y4B6 1507 aa39.76■■■■□ 3.96
ACADVL-206ENST00000577191 UNC13AQ9UPW8 1703 aa39.63■■■■□ 3.94
ACADVL-206ENST00000577191 PABPN1Q86U42 306 aaKnown RBP eCLIP39.45■■■■□ 3.911e-8■■■■■ 33.4
ACADVL-206ENST00000577191 DNAJC5BQ9UF47 199 aa39.45■■■■□ 3.91
ACADVL-206ENST00000577191 BICRAQ9NZM4 1560 aa39.3■■■■□ 3.88
ACADVL-206ENST00000577191 SCRIBQ14160 1630 aa39.12■■■■□ 3.85
ACADVL-206ENST00000577191 SHROOM4Q9ULL8 1493 aa38.91■■■■□ 3.82
ACADVL-206ENST00000577191 EIF4G1Q04637 1599 aaKnown RBP38.31■■■■□ 3.72
ACADVL-206ENST00000577191 CC2D2AQ9P2K1 1620 aa38.25■■■■□ 3.71
ACADVL-206ENST00000577191 CECR2Q9BXF3 1484 aa38.05■■■■□ 3.68
ACADVL-206ENST00000577191 SMARCA4P51532 1647 aa37.39■■■■□ 3.58
ACADVL-206ENST00000577191 BAZ1AQ9NRL2 1556 aaPredicted RBP37.3■■■■□ 3.56
ACADVL-206ENST00000577191 NCAPD3P42695 1498 aa37.27■■■■□ 3.56
ACADVL-206ENST00000577191 ATAD2BQ9ULI0 1458 aa37.25■■■■□ 3.55
ACADVL-206ENST00000577191 SMARCA2P51531 1590 aa37.22■■■■□ 3.55
ACADVL-206ENST00000577191 HMGXB3Q12766 1538 aa37.09■■■■□ 3.53
ACADVL-206ENST00000577191 MROH2BQ7Z745 1585 aa37.03■■■■□ 3.52
ACADVL-206ENST00000577191 PEG3Q9GZU2 1588 aa37.01■■■■□ 3.52
ACADVL-206ENST00000577191 BAZ1BQ9UIG0 1483 aaKnown RBP36.95■■■■□ 3.51
ACADVL-206ENST00000577191 WIZO95785 1651 aa36.63■■■■□ 3.45
ACADVL-206ENST00000577191 ERCC6Q03468 1493 aa36.52■■■■□ 3.44
ACADVL-206ENST00000577191 NESP48681 1621 aa36.48■■■■□ 3.43
ACADVL-206ENST00000577191 RSF1Q96T23 1441 aaPredicted RBP36.48■■■■□ 3.43
ACADVL-206ENST00000577191 LAMC3Q9Y6N6 1575 aa36.38■■■■□ 3.41
ACADVL-206ENST00000577191 CUX2O14529 1486 aa36.3■■■■□ 3.4
ACADVL-206ENST00000577191 TOP2AP11388 1531 aaKnown RBP36.23■■■■□ 3.39
ACADVL-206ENST00000577191 CADPSQ9ULU8 1353 aa36.19■■■■□ 3.38
ACADVL-206ENST00000577191 PDS5BQ9NTI5 1447 aa36.16■■■■□ 3.38
ACADVL-206ENST00000577191 KIF21AQ7Z4S6 1674 aa36.08■■■■□ 3.37
ACADVL-206ENST00000577191 DNAJC5Q9H3Z4 198 aa36.07■■■■□ 3.36
ACADVL-206ENST00000577191 THOC2Q8NI27 1593 aaKnown RBP36.02■■■■□ 3.36
ACADVL-206ENST00000577191 CFTRP13569 1480 aa35.89■■■■□ 3.34
ACADVL-206ENST00000577191 MRC2Q9UBG0 1479 aa35.8■■■■□ 3.32
ACADVL-206ENST00000577191 CCDC88BA6NC98 1476 aa35.79■■■■□ 3.32
ACADVL-206ENST00000577191 FANCD2Q9BXW9 1451 aa35.78■■■■□ 3.32
ACADVL-206ENST00000577191 CEP164Q9UPV0 1460 aa35.78■■■■□ 3.32
ACADVL-206ENST00000577191 WDR62O43379 1518 aa35.67■■■■□ 3.3
ACADVL-206ENST00000577191 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
ACADVL-206ENST00000577191 URB2Q14146 1524 aaKnown RBP35.42■■■■□ 3.26
ACADVL-206ENST00000577191 SUPT5HO00267 1087 aaKnown RBP35.33■■■■□ 3.25
ACADVL-206ENST00000577191 ABCC8Q09428 1581 aa35.17■■■■□ 3.22
ACADVL-206ENST00000577191 TOPBP1Q92547 1522 aa35.16■■■■□ 3.22
ACADVL-206ENST00000577191 DNMBPQ6XZF7 1577 aa35.11■■■■□ 3.21
ACADVL-206ENST00000577191 IFT140Q96RY7 1462 aa35.04■■■■□ 3.2
ACADVL-206ENST00000577191 ZNF608Q9ULD9 1512 aaPredicted RBP34.88■■■■□ 3.17
ACADVL-206ENST00000577191 POLA1P09884 1462 aaPredicted RBP34.84■■■■□ 3.17
ACADVL-206ENST00000577191 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
ACADVL-206ENST00000577191 CUX1P39880 1505 aa34.76■■■■□ 3.16
ACADVL-206ENST00000577191 EIF4G3O43432 1585 aaKnown RBP34.75■■■■□ 3.15
ACADVL-206ENST00000577191 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
ACADVL-206ENST00000577191 SOGA1O94964 1423 aa34.7■■■■□ 3.15
ACADVL-206ENST00000577191 RAD54L2Q9Y4B4 1467 aa34.69■■■■□ 3.14
ACADVL-206ENST00000577191 OSCARQ8IYS5 282 aa34.68■■■■□ 3.14
ACADVL-206ENST00000577191 AQRO60306 1485 aaKnown RBP eCLIP34.65■■■■□ 3.145e-8■■■■□ 24.7
ACADVL-206ENST00000577191 WDR97A6NE52 1622 aa34.55■■■■□ 3.12
ACADVL-206ENST00000577191 TDRD9Q8NDG6 1382 aaKnown RBP34.53■■■■□ 3.12
ACADVL-206ENST00000577191 TRIM41Q8WV44 630 aa34.49■■■■□ 3.11
ACADVL-206ENST00000577191 WRNQ14191 1432 aaPredicted RBP eCLIP34.43■■■■□ 3.1
ACADVL-206ENST00000577191 CHD1O14646 1710 aa34.4■■■■□ 3.1
ACADVL-206ENST00000577191 TOP2BQ02880 1626 aa34.4■■■■□ 3.1
ACADVL-206ENST00000577191 BIVM-ERCC5R4GMW8 1640 aa34.4■■■■□ 3.1
ACADVL-206ENST00000577191 ABCA10Q8WWZ4 1543 aa34.36■■■■□ 3.09
ACADVL-206ENST00000577191 GRIN2BQ13224 1484 aa34.35■■■■□ 3.09
ACADVL-206ENST00000577191 SYNJ1O43426 1573 aa34.35■■■■□ 3.09
ACADVL-206ENST00000577191 SNAPC4Q5SXM2 1469 aa34.34■■■■□ 3.09
ACADVL-206ENST00000577191 FBLN2P98095 1184 aa34.34■■■■□ 3.09
ACADVL-206ENST00000577191 GAPVD1Q14C86 1478 aa34.3■■■■□ 3.08
ACADVL-206ENST00000577191 MAGI1Q96QZ7 1491 aaPredicted RBP34.3■■■■□ 3.08
ACADVL-206ENST00000577191 PBRM1Q86U86 1689 aa34.27■■■■□ 3.08
ACADVL-206ENST00000577191 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
ACADVL-206ENST00000577191 CHMP7Q8WUX9 453 aaPredicted RBP34.19■■■■□ 3.06
ACADVL-206ENST00000577191 RIMBP3CA6NJZ7 1639 aa34.15■■■■□ 3.06
ACADVL-206ENST00000577191 RIMBP3BA6NNM3 1639 aa34.15■■■■□ 3.06
ACADVL-206ENST00000577191 RIMBP3Q9UFD9 1639 aa34.15■■■■□ 3.06
ACADVL-206ENST00000577191 SYNJ2O15056 1496 aa34.15■■■■□ 3.06
ACADVL-206ENST00000577191 ARHGEF11O15085 1522 aa34.1■■■■□ 3.05
ACADVL-206ENST00000577191 CLASP1Q7Z460 1538 aa33.99■■■■□ 3.03
ACADVL-206ENST00000577191 ADAMTS12P58397 1594 aa33.96■■■■□ 3.03
ACADVL-206ENST00000577191 ERICH3Q5RHP9 1530 aa33.95■■■■□ 3.03
ACADVL-206ENST00000577191 GRIN2AQ12879 1464 aa33.89■■■■□ 3.02
ACADVL-206ENST00000577191 FHAD1B1AJZ9 1412 aa33.89■■■■□ 3.02
ACADVL-206ENST00000577191 CYB5RLQ6IPT4 315 aa33.8■■■■□ 3
ACADVL-206ENST00000577191 ARAP1Q96P48 1450 aa33.8■■■■□ 3
ACADVL-206ENST00000577191 NUP160Q12769 1436 aa33.75■■■□□ 2.99
ACADVL-206ENST00000577191 KIF27Q86VH2 1401 aa33.75■■■□□ 2.99
ACADVL-206ENST00000577191 CEP170Q5SW79 1584 aa33.73■■■□□ 2.99
ACADVL-206ENST00000577191 IGF1RP08069 1367 aa33.62■■■□□ 2.97
ACADVL-206ENST00000577191 CUL7Q14999 1698 aa33.6■■■□□ 2.97
ACADVL-206ENST00000577191 SHROOM2Q13796 1616 aa33.54■■■□□ 2.96
ACADVL-206ENST00000577191 ERCC6L2Q5T890 1561 aa33.48■■■□□ 2.95
ACADVL-206ENST00000577191 RUSC2Q8N2Y8 1516 aa33.46■■■□□ 2.95
ACADVL-206ENST00000577191 CARMIL1Q5VZK9 1371 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms