RNA–Protein interactions for RNA: ENST00000293379.8

ITGA5-201, Transcript of integrin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA5, Length 4,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-201ENST00000293379 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
ITGA5-201ENST00000293379 NISCHQ9Y2I1 1504 aa22.04■■□□□ 1.12
ITGA5-201ENST00000293379 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
ITGA5-201ENST00000293379 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
ITGA5-201ENST00000293379 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
ITGA5-201ENST00000293379 PCGF6Q9BYE7 350 aa21.03■□□□□ 0.96
ITGA5-201ENST00000293379 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
ITGA5-201ENST00000293379 TTBK1Q5TCY1 1321 aaPredicted RBP20.49■□□□□ 0.87
ITGA5-201ENST00000293379 HRCP23327 699 aa20.24■□□□□ 0.83
ITGA5-201ENST00000293379 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
ITGA5-201ENST00000293379 ZEB1P37275 1124 aaPredicted RBP20.17■□□□□ 0.82
ITGA5-201ENST00000293379 CCER1Q8TC90 406 aaPredicted RBP20.16■□□□□ 0.82
ITGA5-201ENST00000293379 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
ITGA5-201ENST00000293379 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
ITGA5-201ENST00000293379 APLP2Q06481 763 aa20.12■□□□□ 0.81
ITGA5-201ENST00000293379 PPARGC1BQ86YN6 1023 aaKnown RBP20.09■□□□□ 0.81
ITGA5-201ENST00000293379 LOC105371045A0A1W2PR82 267 aa20.02■□□□□ 0.8
ITGA5-201ENST00000293379 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
ITGA5-201ENST00000293379 RANGAP1P46060 587 aaPredicted RBP19.96■□□□□ 0.79
ITGA5-201ENST00000293379 YTHDC1Q96MU7 727 aaKnown RBP19.94■□□□□ 0.78
ITGA5-201ENST00000293379 TRIM26Q12899 539 aaPredicted RBP19.94■□□□□ 0.78
ITGA5-201ENST00000293379 UBTFP17480 764 aaKnown RBP19.75■□□□□ 0.75
ITGA5-201ENST00000293379 ERICH6Q7L0X2 663 aa19.52■□□□□ 0.71
ITGA5-201ENST00000293379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
ITGA5-201ENST00000293379 MYT1Q01538 1121 aa19.49■□□□□ 0.71
ITGA5-201ENST00000293379 ATP1B4Q9UN42 357 aaPredicted RBP19.46■□□□□ 0.71
ITGA5-201ENST00000293379 NEFLP07196 543 aa19.37■□□□□ 0.69
ITGA5-201ENST00000293379 HNRNPUL2Q1KMD3 747 aaKnown RBP19.37■□□□□ 0.69
ITGA5-201ENST00000293379 DIEXFQ68CQ4 756 aaKnown RBP19.34■□□□□ 0.69
ITGA5-201ENST00000293379 ITGAEP38570 1179 aa19.26■□□□□ 0.67
ITGA5-201ENST00000293379 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
ITGA5-201ENST00000293379 ACIN1Q9UKV3 1341 aaKnown RBP18.97■□□□□ 0.63
ITGA5-201ENST00000293379 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
ITGA5-201ENST00000293379 BCANQ96GW7 911 aa18.89■□□□□ 0.62
ITGA5-201ENST00000293379 POLR3GLQ9BT43 218 aa18.86■□□□□ 0.61
ITGA5-201ENST00000293379 ZNF316A6NFI3 1004 aaPredicted RBP18.82■□□□□ 0.6
ITGA5-201ENST00000293379 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
ITGA5-201ENST00000293379 NEUROD1Q13562 356 aa18.74■□□□□ 0.59
ITGA5-201ENST00000293379 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
ITGA5-201ENST00000293379 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
ITGA5-201ENST00000293379 FAM50AQ14320 339 aaKnown RBP18.63■□□□□ 0.57
ITGA5-201ENST00000293379 ABCC9O60706 1549 aa18.6■□□□□ 0.57
ITGA5-201ENST00000293379 DAXXQ9UER7 740 aaPredicted RBP18.55■□□□□ 0.56
ITGA5-201ENST00000293379 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
ITGA5-201ENST00000293379 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
ITGA5-201ENST00000293379 RTL5Q5HYW3 569 aaPredicted RBP18.47■□□□□ 0.55
ITGA5-201ENST00000293379 ANP32CO43423 234 aa18.46■□□□□ 0.55
ITGA5-201ENST00000293379 TRIM52Q96A61 297 aa18.4■□□□□ 0.54
ITGA5-201ENST00000293379 MIER1Q8N108 512 aa18.39■□□□□ 0.54
ITGA5-201ENST00000293379 CDK11AQ9UQ88 783 aaPredicted RBP18.39■□□□□ 0.53
ITGA5-201ENST00000293379 FKBP8Q14318 412 aa18.36■□□□□ 0.53
ITGA5-201ENST00000293379 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.53
ITGA5-201ENST00000293379 P3H3Q8IVL6 736 aa18.29■□□□□ 0.52
ITGA5-201ENST00000293379 DDX10Q13206 875 aaKnown RBP18.28■□□□□ 0.52
ITGA5-201ENST00000293379 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
ITGA5-201ENST00000293379 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
ITGA5-201ENST00000293379 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
ITGA5-201ENST00000293379 HNRNPUQ00839 825 aaKnown RBP eCLIP18.14■□□□□ 0.491e-7■□□□□ 9.1
ITGA5-201ENST00000293379 SLC4A1APQ9BWU0 796 aaKnown RBP18.13■□□□□ 0.49
ITGA5-201ENST00000293379 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
ITGA5-201ENST00000293379 ARID3CA6NKF2 412 aa18.1■□□□□ 0.49
ITGA5-201ENST00000293379 SCRIBQ14160 1630 aa18.08■□□□□ 0.48
ITGA5-201ENST00000293379 NPM2Q86SE8 214 aaKnown RBP18.07■□□□□ 0.48
ITGA5-201ENST00000293379 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
ITGA5-201ENST00000293379 FAM9BQ8IZU0 186 aa18.03■□□□□ 0.48
ITGA5-201ENST00000293379 ANP32AP39687 249 aaKnown RBP18.01■□□□□ 0.47
ITGA5-201ENST00000293379 CCDC180Q9P1Z9 1646 aa18■□□□□ 0.47
ITGA5-201ENST00000293379 TONSLQ96HA7 1378 aa17.98■□□□□ 0.47
ITGA5-201ENST00000293379 NBR1Q14596 966 aa17.95■□□□□ 0.46
ITGA5-201ENST00000293379 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
ITGA5-201ENST00000293379 SALL2Q9Y467 1007 aaPredicted RBP17.93■□□□□ 0.46
ITGA5-201ENST00000293379 CEP162Q5TB80 1403 aa17.91■□□□□ 0.46
ITGA5-201ENST00000293379 CLIP1P30622 1438 aa17.88■□□□□ 0.45
ITGA5-201ENST00000293379 CHIC2Q9UKJ5 165 aa17.86■□□□□ 0.45
ITGA5-201ENST00000293379 BCL11AQ9H165 835 aa17.85■□□□□ 0.45
ITGA5-201ENST00000293379 EIF5BO60841 1220 aaKnown RBP17.85■□□□□ 0.45
ITGA5-201ENST00000293379 ANP32EQ9BTT0 268 aa17.84■□□□□ 0.45
ITGA5-201ENST00000293379 CCDC136Q96JN2 1154 aa17.83■□□□□ 0.45
ITGA5-201ENST00000293379 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.44
ITGA5-201ENST00000293379 MRS2Q9HD23 443 aa17.82■□□□□ 0.44
ITGA5-201ENST00000293379 SENP3-EIF4A1A0A087X0R7 540 aa17.82■□□□□ 0.44
ITGA5-201ENST00000293379 SUPT16HQ9Y5B9 1047 aaKnown RBP17.82■□□□□ 0.44
ITGA5-201ENST00000293379 FBLN2P98095 1184 aa17.79■□□□□ 0.44
ITGA5-201ENST00000293379 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
ITGA5-201ENST00000293379 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
ITGA5-201ENST00000293379 TMC1Q8TDI8 760 aa17.72■□□□□ 0.43
ITGA5-201ENST00000293379 SIN3AQ96ST3 1273 aa17.71■□□□□ 0.42
ITGA5-201ENST00000293379 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
ITGA5-201ENST00000293379 GOLGA3Q08378 1498 aa17.66■□□□□ 0.42
ITGA5-201ENST00000293379 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
ITGA5-201ENST00000293379 EIF4G2P78344 907 aaKnown RBP eCLIP17.62■□□□□ 0.41
ITGA5-201ENST00000293379 ARXQ96QS3 562 aa17.61■□□□□ 0.41
ITGA5-201ENST00000293379 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
ITGA5-201ENST00000293379 EEA1Q15075 1411 aa17.58■□□□□ 0.41
ITGA5-201ENST00000293379 MTUS2Q5JR59 1369 aa17.58■□□□□ 0.41
ITGA5-201ENST00000293379 SOGA1O94964 1423 aa17.56■□□□□ 0.4
ITGA5-201ENST00000293379 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
ITGA5-201ENST00000293379 RBM19Q9Y4C8 960 aaKnown RBP17.53■□□□□ 0.4
ITGA5-201ENST00000293379 CECR2Q9BXF3 1484 aa17.53■□□□□ 0.4
ITGA5-201ENST00000293379 B4GALNT3Q6L9W6 998 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms