RNA–Protein interactions for RNA: ENST00000409913.5

MCFD2-207, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 1 (best) BASIC

Gene MCFD2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-207ENST00000409913 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
MCFD2-207ENST00000409913 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
MCFD2-207ENST00000409913 ZCCHC6Q5VYS8 1495 aaKnown RBP18.35■□□□□ 0.53
MCFD2-207ENST00000409913 DCAF8L2P0C7V8 631 aa18.31■□□□□ 0.52
MCFD2-207ENST00000409913 ABCC9O60706 1549 aa18.2■□□□□ 0.5
MCFD2-207ENST00000409913 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
MCFD2-207ENST00000409913 DCAF1Q9Y4B6 1507 aa18■□□□□ 0.47
MCFD2-207ENST00000409913 MYO15BQ96JP2 1530 aa17.79■□□□□ 0.44
MCFD2-207ENST00000409913 NACADO15069 1562 aa17.74■□□□□ 0.43
MCFD2-207ENST00000409913 RB1CC1Q8TDY2 1594 aa17.6■□□□□ 0.41
MCFD2-207ENST00000409913 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
MCFD2-207ENST00000409913 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
MCFD2-207ENST00000409913 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
MCFD2-207ENST00000409913 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
MCFD2-207ENST00000409913 BICRAQ9NZM4 1560 aa17.14■□□□□ 0.33
MCFD2-207ENST00000409913 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
MCFD2-207ENST00000409913 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.31
MCFD2-207ENST00000409913 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
MCFD2-207ENST00000409913 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
MCFD2-207ENST00000409913 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
MCFD2-207ENST00000409913 WIZO95785 1651 aa16.81■□□□□ 0.28
MCFD2-207ENST00000409913 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
MCFD2-207ENST00000409913 ATAD2BQ9ULI0 1458 aa16.59■□□□□ 0.25
MCFD2-207ENST00000409913 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
MCFD2-207ENST00000409913 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
MCFD2-207ENST00000409913 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
MCFD2-207ENST00000409913 SMARCA2P51531 1590 aa16.5■□□□□ 0.23
MCFD2-207ENST00000409913 CCDC88BA6NC98 1476 aa16.47■□□□□ 0.23
MCFD2-207ENST00000409913 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
MCFD2-207ENST00000409913 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
MCFD2-207ENST00000409913 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
MCFD2-207ENST00000409913 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
MCFD2-207ENST00000409913 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
MCFD2-207ENST00000409913 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
MCFD2-207ENST00000409913 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
MCFD2-207ENST00000409913 CFTRP13569 1480 aa16.06■□□□□ 0.16
MCFD2-207ENST00000409913 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
MCFD2-207ENST00000409913 FAM9AQ8IZU1 332 aaPredicted RBP16.02■□□□□ 0.15
MCFD2-207ENST00000409913 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
MCFD2-207ENST00000409913 NESP48681 1621 aa15.98■□□□□ 0.15
MCFD2-207ENST00000409913 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
MCFD2-207ENST00000409913 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
MCFD2-207ENST00000409913 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
MCFD2-207ENST00000409913 SOGA1O94964 1423 aa15.86■□□□□ 0.13
MCFD2-207ENST00000409913 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
MCFD2-207ENST00000409913 PRDM2Q13029 1718 aa15.85■□□□□ 0.13
MCFD2-207ENST00000409913 CUX1P39880 1505 aa15.84■□□□□ 0.13
MCFD2-207ENST00000409913 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.12
MCFD2-207ENST00000409913 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
MCFD2-207ENST00000409913 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
MCFD2-207ENST00000409913 BIVM-ERCC5R4GMW8 1640 aa15.77■□□□□ 0.12
MCFD2-207ENST00000409913 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
MCFD2-207ENST00000409913 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
MCFD2-207ENST00000409913 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
MCFD2-207ENST00000409913 KIF21AQ7Z4S6 1674 aa15.69■□□□□ 0.1
MCFD2-207ENST00000409913 FGD5Q6ZNL6 1462 aa15.67■□□□□ 0.1
MCFD2-207ENST00000409913 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
MCFD2-207ENST00000409913 TOPBP1Q92547 1522 aa15.67■□□□□ 0.1
MCFD2-207ENST00000409913 EEA1Q15075 1411 aa15.66■□□□□ 0.1
MCFD2-207ENST00000409913 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
MCFD2-207ENST00000409913 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
MCFD2-207ENST00000409913 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
MCFD2-207ENST00000409913 CUX2O14529 1486 aa15.58■□□□□ 0.08
MCFD2-207ENST00000409913 KIF27Q86VH2 1401 aa15.58■□□□□ 0.08
MCFD2-207ENST00000409913 UBTFP17480 764 aaKnown RBP15.55■□□□□ 0.08
MCFD2-207ENST00000409913 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
MCFD2-207ENST00000409913 MRC2Q9UBG0 1479 aa15.54■□□□□ 0.08
MCFD2-207ENST00000409913 IGF1RP08069 1367 aa15.51■□□□□ 0.07
MCFD2-207ENST00000409913 RAPGEF2Q9Y4G8 1499 aa15.5■□□□□ 0.07
MCFD2-207ENST00000409913 ABCA10Q8WWZ4 1543 aa15.5■□□□□ 0.07
MCFD2-207ENST00000409913 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
MCFD2-207ENST00000409913 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
MCFD2-207ENST00000409913 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
MCFD2-207ENST00000409913 KIF21BO75037 1637 aa15.47■□□□□ 0.07
MCFD2-207ENST00000409913 TNIKQ9UKE5 1360 aa15.46■□□□□ 0.07
MCFD2-207ENST00000409913 WDR62O43379 1518 aa15.44■□□□□ 0.06
MCFD2-207ENST00000409913 TARBP1Q13395 1621 aaKnown RBP15.42■□□□□ 0.06
MCFD2-207ENST00000409913 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
MCFD2-207ENST00000409913 RANGAP1P46060 587 aaPredicted RBP15.41■□□□□ 0.06
MCFD2-207ENST00000409913 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
MCFD2-207ENST00000409913 CEP162Q5TB80 1403 aa15.4■□□□□ 0.06
MCFD2-207ENST00000409913 WDR97A6NE52 1622 aa15.4■□□□□ 0.06
MCFD2-207ENST00000409913 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.052e-6■■■■□ 23.2
MCFD2-207ENST00000409913 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
MCFD2-207ENST00000409913 ERICH3Q5RHP9 1530 aa15.37■□□□□ 0.05
MCFD2-207ENST00000409913 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
MCFD2-207ENST00000409913 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
MCFD2-207ENST00000409913 IFT140Q96RY7 1462 aa15.34■□□□□ 0.05
MCFD2-207ENST00000409913 CLIP1P30622 1438 aa15.29■□□□□ 0.04
MCFD2-207ENST00000409913 PPARGC1BQ86YN6 1023 aaKnown RBP15.26■□□□□ 0.03
MCFD2-207ENST00000409913 CUL7Q14999 1698 aa15.24■□□□□ 0.03
MCFD2-207ENST00000409913 GRIN2BQ13224 1484 aa15.23■□□□□ 0.03
MCFD2-207ENST00000409913 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
MCFD2-207ENST00000409913 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.03
MCFD2-207ENST00000409913 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
MCFD2-207ENST00000409913 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
MCFD2-207ENST00000409913 P3H3Q8IVL6 736 aa15.16■□□□□ 0.02
MCFD2-207ENST00000409913 ARHGAP35Q9NRY4 1499 aa15.15■□□□□ 0.02
MCFD2-207ENST00000409913 ADAMTS12P58397 1594 aa15.15■□□□□ 0.02
MCFD2-207ENST00000409913 PCGF6Q9BYE7 350 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms