RNA–Protein interactions for RNA: ENST00000356839.9

ACADVL-203, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACADVL, Length 2,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-203ENST00000356839 NISCHQ9Y2I1 1504 aa42.66■■■■■ 4.42
ACADVL-203ENST00000356839 CCDC180Q9P1Z9 1646 aa36.64■■■■□ 3.46
ACADVL-203ENST00000356839 ZCCHC6Q5VYS8 1495 aaKnown RBP35.93■■■■□ 3.34
ACADVL-203ENST00000356839 SHROOM4Q9ULL8 1493 aa35.69■■■■□ 3.3
ACADVL-203ENST00000356839 DCAF8L2P0C7V8 631 aa35.48■■■■□ 3.27
ACADVL-203ENST00000356839 DCAF1Q9Y4B6 1507 aa35.08■■■■□ 3.21
ACADVL-203ENST00000356839 SUPT5HO00267 1087 aaKnown RBP34.7■■■■□ 3.14
ACADVL-203ENST00000356839 ABCC9O60706 1549 aa34.46■■■■□ 3.11
ACADVL-203ENST00000356839 MYO15BQ96JP2 1530 aa34.36■■■■□ 3.09
ACADVL-203ENST00000356839 SCRIBQ14160 1630 aa34.11■■■■□ 3.05
ACADVL-203ENST00000356839 NACADO15069 1562 aa34.07■■■■□ 3.04
ACADVL-203ENST00000356839 RB1CC1Q8TDY2 1594 aa33.65■■■□□ 2.98
ACADVL-203ENST00000356839 RSF1Q96T23 1441 aaPredicted RBP33.46■■■□□ 2.95
ACADVL-203ENST00000356839 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.94
ACADVL-203ENST00000356839 CECR2Q9BXF3 1484 aa33.28■■■□□ 2.92
ACADVL-203ENST00000356839 MROH2BQ7Z745 1585 aa33.09■■■□□ 2.89
ACADVL-203ENST00000356839 UNC13AQ9UPW8 1703 aa33.03■■■□□ 2.88
ACADVL-203ENST00000356839 WIZO95785 1651 aa32.85■■■□□ 2.85
ACADVL-203ENST00000356839 BAZ1AQ9NRL2 1556 aaPredicted RBP32.82■■■□□ 2.85
ACADVL-203ENST00000356839 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.845e-9■■■■■ 34.2
ACADVL-203ENST00000356839 BICRAQ9NZM4 1560 aa32.72■■■□□ 2.83
ACADVL-203ENST00000356839 SMARCA4P51532 1647 aa32.62■■■□□ 2.81
ACADVL-203ENST00000356839 TRIM41Q8WV44 630 aa32.44■■■□□ 2.78
ACADVL-203ENST00000356839 TOP2AP11388 1531 aaKnown RBP32.38■■■□□ 2.77
ACADVL-203ENST00000356839 LOC105371045A0A1W2PR82 267 aa32.38■■■□□ 2.77
ACADVL-203ENST00000356839 CCDC88BA6NC98 1476 aa32.22■■■□□ 2.75
ACADVL-203ENST00000356839 SMARCA2P51531 1590 aa32.16■■■□□ 2.74
ACADVL-203ENST00000356839 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
ACADVL-203ENST00000356839 PEG3Q9GZU2 1588 aa32.08■■■□□ 2.73
ACADVL-203ENST00000356839 FAM9AQ8IZU1 332 aaPredicted RBP32.06■■■□□ 2.72
ACADVL-203ENST00000356839 ATAD2BQ9ULI0 1458 aa31.98■■■□□ 2.71
ACADVL-203ENST00000356839 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
ACADVL-203ENST00000356839 ABCC8Q09428 1581 aa31.83■■■□□ 2.69
ACADVL-203ENST00000356839 EHMT2Q96KQ7 1210 aa31.74■■■□□ 2.67
ACADVL-203ENST00000356839 PCGF6Q9BYE7 350 aa31.58■■■□□ 2.65
ACADVL-203ENST00000356839 NCAPD3P42695 1498 aa31.53■■■□□ 2.64
ACADVL-203ENST00000356839 WRNQ14191 1432 aaPredicted RBP eCLIP31.45■■■□□ 2.63
ACADVL-203ENST00000356839 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
ACADVL-203ENST00000356839 SOGA1O94964 1423 aa31.42■■■□□ 2.62
ACADVL-203ENST00000356839 RUSC2Q8N2Y8 1516 aa31.29■■■□□ 2.6
ACADVL-203ENST00000356839 SYNJ1O43426 1573 aa31.29■■■□□ 2.6
ACADVL-203ENST00000356839 TRIM26Q12899 539 aaPredicted RBP31.24■■■□□ 2.59
ACADVL-203ENST00000356839 CSRNP3Q8WYN3 585 aa31.24■■■□□ 2.59
ACADVL-203ENST00000356839 EEA1Q15075 1411 aa31.21■■■□□ 2.59
ACADVL-203ENST00000356839 HRCP23327 699 aa31.1■■■□□ 2.57
ACADVL-203ENST00000356839 CC2D2AQ9P2K1 1620 aa31.07■■■□□ 2.56
ACADVL-203ENST00000356839 CFTRP13569 1480 aa31.05■■■□□ 2.56
ACADVL-203ENST00000356839 TOP2BQ02880 1626 aa31.01■■■□□ 2.55
ACADVL-203ENST00000356839 UBTFP17480 764 aaKnown RBP30.99■■■□□ 2.55
ACADVL-203ENST00000356839 TNIKQ9UKE5 1360 aa30.99■■■□□ 2.55
ACADVL-203ENST00000356839 CEP162Q5TB80 1403 aa30.93■■■□□ 2.54
ACADVL-203ENST00000356839 GOLGA3Q08378 1498 aa30.92■■■□□ 2.54
ACADVL-203ENST00000356839 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
ACADVL-203ENST00000356839 PPARGC1BQ86YN6 1023 aaKnown RBP30.9■■■□□ 2.54
ACADVL-203ENST00000356839 CUX1P39880 1505 aa30.86■■■□□ 2.53
ACADVL-203ENST00000356839 CADPSQ9ULU8 1353 aa30.86■■■□□ 2.53
ACADVL-203ENST00000356839 CEP164Q9UPV0 1460 aa30.83■■■□□ 2.53
ACADVL-203ENST00000356839 KIF21BO75037 1637 aa30.78■■■□□ 2.52
ACADVL-203ENST00000356839 PRDM2Q13029 1718 aa30.71■■■□□ 2.51
ACADVL-203ENST00000356839 RAPGEF2Q9Y4G8 1499 aa30.68■■■□□ 2.5
ACADVL-203ENST00000356839 KIF27Q86VH2 1401 aa30.57■■■□□ 2.48
ACADVL-203ENST00000356839 CLIP1P30622 1438 aa30.53■■■□□ 2.48
ACADVL-203ENST00000356839 PRXQ9BXM0 1461 aa30.52■■■□□ 2.48
ACADVL-203ENST00000356839 FANCD2Q9BXW9 1451 aa30.52■■■□□ 2.48
ACADVL-203ENST00000356839 TTBK1Q5TCY1 1321 aaPredicted RBP30.51■■■□□ 2.47
ACADVL-203ENST00000356839 NESP48681 1621 aa30.49■■■□□ 2.47
ACADVL-203ENST00000356839 RANGAP1P46060 587 aaPredicted RBP30.48■■■□□ 2.47
ACADVL-203ENST00000356839 DNAJC5BQ9UF47 199 aa30.45■■■□□ 2.46
ACADVL-203ENST00000356839 ERICH3Q5RHP9 1530 aa30.43■■■□□ 2.46
ACADVL-203ENST00000356839 FGD5Q6ZNL6 1462 aa30.42■■■□□ 2.46
ACADVL-203ENST00000356839 CUX2O14529 1486 aa30.4■■■□□ 2.46
ACADVL-203ENST00000356839 IGF1RP08069 1367 aa30.32■■■□□ 2.44
ACADVL-203ENST00000356839 VPS8Q8N3P4 1428 aa30.3■■■□□ 2.44
ACADVL-203ENST00000356839 LAMC3Q9Y6N6 1575 aa30.27■■■□□ 2.44
ACADVL-203ENST00000356839 DNMBPQ6XZF7 1577 aa30.26■■■□□ 2.43
ACADVL-203ENST00000356839 TOPBP1Q92547 1522 aa30.24■■■□□ 2.43
ACADVL-203ENST00000356839 ZEB1P37275 1124 aaPredicted RBP30.23■■■□□ 2.43
ACADVL-203ENST00000356839 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.42
ACADVL-203ENST00000356839 POLA1P09884 1462 aaPredicted RBP30.17■■■□□ 2.42
ACADVL-203ENST00000356839 CARMIL1Q5VZK9 1371 aa30.16■■■□□ 2.42
ACADVL-203ENST00000356839 APLP2Q06481 763 aa30.14■■■□□ 2.42
ACADVL-203ENST00000356839 PDS5BQ9NTI5 1447 aa30.12■■■□□ 2.41
ACADVL-203ENST00000356839 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
ACADVL-203ENST00000356839 URB2Q14146 1524 aaKnown RBP30.11■■■□□ 2.41
ACADVL-203ENST00000356839 ABCA10Q8WWZ4 1543 aa30.09■■■□□ 2.41
ACADVL-203ENST00000356839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.08■■■□□ 2.41
ACADVL-203ENST00000356839 ARHGAP35Q9NRY4 1499 aa30■■■□□ 2.39
ACADVL-203ENST00000356839 CCER1Q8TC90 406 aaPredicted RBP29.97■■■□□ 2.39
ACADVL-203ENST00000356839 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
ACADVL-203ENST00000356839 TDRD9Q8NDG6 1382 aaKnown RBP29.89■■■□□ 2.38
ACADVL-203ENST00000356839 KANK4Q5T7N3 995 aaPredicted RBP29.86■■■□□ 2.37
ACADVL-203ENST00000356839 WDR97A6NE52 1622 aa29.83■■■□□ 2.37
ACADVL-203ENST00000356839 HNRNPUL2Q1KMD3 747 aaKnown RBP29.83■■■□□ 2.37
ACADVL-203ENST00000356839 CUL7Q14999 1698 aa29.78■■■□□ 2.36
ACADVL-203ENST00000356839 GAPVD1Q14C86 1478 aa29.76■■■□□ 2.35
ACADVL-203ENST00000356839 ABCA5Q8WWZ7 1642 aa29.74■■■□□ 2.35
ACADVL-203ENST00000356839 P3H3Q8IVL6 736 aa29.74■■■□□ 2.35
ACADVL-203ENST00000356839 TARBP1Q13395 1621 aaKnown RBP29.68■■■□□ 2.34
ACADVL-203ENST00000356839 MRC2Q9UBG0 1479 aa29.67■■■□□ 2.34
ACADVL-203ENST00000356839 FHOD3Q2V2M9 1422 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms