RNA–Protein interactions for RNA: ENST00000322910.9

ACADVL-201, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2

Gene ACADVL, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-201ENST00000322910 NISCHQ9Y2I1 1504 aa42.16■■■■■ 4.34
ACADVL-201ENST00000322910 CCDC180Q9P1Z9 1646 aa36.59■■■■□ 3.45
ACADVL-201ENST00000322910 ZCCHC6Q5VYS8 1495 aaKnown RBP35.39■■■■□ 3.26
ACADVL-201ENST00000322910 DCAF8L2P0C7V8 631 aa35.11■■■■□ 3.21
ACADVL-201ENST00000322910 ABCC9O60706 1549 aa34.84■■■■□ 3.17
ACADVL-201ENST00000322910 DCAF1Q9Y4B6 1507 aa34.75■■■■□ 3.15
ACADVL-201ENST00000322910 SHROOM4Q9ULL8 1493 aa34.66■■■■□ 3.14
ACADVL-201ENST00000322910 MYO15BQ96JP2 1530 aa34.31■■■■□ 3.08
ACADVL-201ENST00000322910 NACADO15069 1562 aa34.15■■■■□ 3.06
ACADVL-201ENST00000322910 RB1CC1Q8TDY2 1594 aa33.87■■■■□ 3.01
ACADVL-201ENST00000322910 SCRIBQ14160 1630 aa33.84■■■■□ 3.01
ACADVL-201ENST00000322910 SUPT5HO00267 1087 aaKnown RBP33.38■■■□□ 2.93
ACADVL-201ENST00000322910 UNC13AQ9UPW8 1703 aa33.15■■■□□ 2.9
ACADVL-201ENST00000322910 PABPN1Q86U42 306 aaKnown RBP eCLIP32.98■■■□□ 2.875e-9■■■■■ 34.2
ACADVL-201ENST00000322910 BICRAQ9NZM4 1560 aa32.89■■■□□ 2.85
ACADVL-201ENST00000322910 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
ACADVL-201ENST00000322910 RSF1Q96T23 1441 aaPredicted RBP32.79■■■□□ 2.84
ACADVL-201ENST00000322910 MROH2BQ7Z745 1585 aa32.63■■■□□ 2.81
ACADVL-201ENST00000322910 BAZ1AQ9NRL2 1556 aaPredicted RBP32.52■■■□□ 2.8
ACADVL-201ENST00000322910 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
ACADVL-201ENST00000322910 WIZO95785 1651 aa32.34■■■□□ 2.77
ACADVL-201ENST00000322910 TOP2AP11388 1531 aaKnown RBP31.94■■■□□ 2.7
ACADVL-201ENST00000322910 PEG3Q9GZU2 1588 aa31.91■■■□□ 2.7
ACADVL-201ENST00000322910 CHIC1Q5VXU3 224 aa31.9■■■□□ 2.7
ACADVL-201ENST00000322910 EIF4G1Q04637 1599 aaKnown RBP31.89■■■□□ 2.7
ACADVL-201ENST00000322910 ATAD2BQ9ULI0 1458 aa31.89■■■□□ 2.7
ACADVL-201ENST00000322910 SMARCA2P51531 1590 aa31.8■■■□□ 2.68
ACADVL-201ENST00000322910 CCDC88BA6NC98 1476 aa31.72■■■□□ 2.67
ACADVL-201ENST00000322910 BAZ1BQ9UIG0 1483 aaKnown RBP31.71■■■□□ 2.67
ACADVL-201ENST00000322910 NCAPD3P42695 1498 aa31.58■■■□□ 2.65
ACADVL-201ENST00000322910 HMGXB3Q12766 1538 aa31.46■■■□□ 2.63
ACADVL-201ENST00000322910 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
ACADVL-201ENST00000322910 TRIM41Q8WV44 630 aa31.32■■■□□ 2.6
ACADVL-201ENST00000322910 ABCC8Q09428 1581 aa31.07■■■□□ 2.56
ACADVL-201ENST00000322910 CFTRP13569 1480 aa30.9■■■□□ 2.54
ACADVL-201ENST00000322910 DNAJC5BQ9UF47 199 aa30.87■■■□□ 2.53
ACADVL-201ENST00000322910 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
ACADVL-201ENST00000322910 FAM9AQ8IZU1 332 aaPredicted RBP30.85■■■□□ 2.53
ACADVL-201ENST00000322910 CADPSQ9ULU8 1353 aa30.83■■■□□ 2.53
ACADVL-201ENST00000322910 LOC105371045A0A1W2PR82 267 aa30.79■■■□□ 2.52
ACADVL-201ENST00000322910 SYNJ1O43426 1573 aa30.69■■■□□ 2.5
ACADVL-201ENST00000322910 NESP48681 1621 aa30.6■■■□□ 2.49
ACADVL-201ENST00000322910 PRDM2Q13029 1718 aa30.56■■■□□ 2.48
ACADVL-201ENST00000322910 SOGA1O94964 1423 aa30.54■■■□□ 2.48
ACADVL-201ENST00000322910 TOP2BQ02880 1626 aa30.51■■■□□ 2.47
ACADVL-201ENST00000322910 EHMT2Q96KQ7 1210 aa30.49■■■□□ 2.47
ACADVL-201ENST00000322910 CUX1P39880 1505 aa30.49■■■□□ 2.47
ACADVL-201ENST00000322910 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
ACADVL-201ENST00000322910 LAMC3Q9Y6N6 1575 aa30.45■■■□□ 2.46
ACADVL-201ENST00000322910 RUSC2Q8N2Y8 1516 aa30.44■■■□□ 2.46
ACADVL-201ENST00000322910 BIVM-ERCC5R4GMW8 1640 aa30.43■■■□□ 2.46
ACADVL-201ENST00000322910 EEA1Q15075 1411 aa30.34■■■□□ 2.45
ACADVL-201ENST00000322910 CSRNP3Q8WYN3 585 aa30.34■■■□□ 2.45
ACADVL-201ENST00000322910 PDS5BQ9NTI5 1447 aa30.3■■■□□ 2.44
ACADVL-201ENST00000322910 CEP164Q9UPV0 1460 aa30.26■■■□□ 2.43
ACADVL-201ENST00000322910 FGD5Q6ZNL6 1462 aa30.15■■■□□ 2.42
ACADVL-201ENST00000322910 TOPBP1Q92547 1522 aa30.13■■■□□ 2.41
ACADVL-201ENST00000322910 DNMBPQ6XZF7 1577 aa30.13■■■□□ 2.41
ACADVL-201ENST00000322910 KIF21AQ7Z4S6 1674 aa30.1■■■□□ 2.41
ACADVL-201ENST00000322910 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
ACADVL-201ENST00000322910 KIF27Q86VH2 1401 aa30.05■■■□□ 2.4
ACADVL-201ENST00000322910 UBTFP17480 764 aaKnown RBP30.01■■■□□ 2.39
ACADVL-201ENST00000322910 POLA1P09884 1462 aaPredicted RBP30■■■□□ 2.39
ACADVL-201ENST00000322910 CUX2O14529 1486 aa30■■■□□ 2.39
ACADVL-201ENST00000322910 RAD54L2Q9Y4B4 1467 aa29.98■■■□□ 2.39
ACADVL-201ENST00000322910 GOLGA3Q08378 1498 aa29.97■■■□□ 2.39
ACADVL-201ENST00000322910 TNIKQ9UKE5 1360 aa29.92■■■□□ 2.38
ACADVL-201ENST00000322910 KIF21BO75037 1637 aa29.92■■■□□ 2.38
ACADVL-201ENST00000322910 RAPGEF2Q9Y4G8 1499 aa29.88■■■□□ 2.37
ACADVL-201ENST00000322910 MRC2Q9UBG0 1479 aa29.88■■■□□ 2.37
ACADVL-201ENST00000322910 ABCA10Q8WWZ4 1543 aa29.85■■■□□ 2.37
ACADVL-201ENST00000322910 IGF1RP08069 1367 aa29.84■■■□□ 2.37
ACADVL-201ENST00000322910 PRXQ9BXM0 1461 aa29.84■■■□□ 2.37
ACADVL-201ENST00000322910 ERCC6Q03468 1493 aa29.84■■■□□ 2.37
ACADVL-201ENST00000322910 CEP162Q5TB80 1403 aa29.78■■■□□ 2.36
ACADVL-201ENST00000322910 TDRD9Q8NDG6 1382 aaKnown RBP29.72■■■□□ 2.35
ACADVL-201ENST00000322910 ERICH3Q5RHP9 1530 aa29.72■■■□□ 2.35
ACADVL-201ENST00000322910 CARMIL1Q5VZK9 1371 aa29.69■■■□□ 2.34
ACADVL-201ENST00000322910 WDR62O43379 1518 aa29.68■■■□□ 2.34
ACADVL-201ENST00000322910 WDR97A6NE52 1622 aa29.65■■■□□ 2.34
ACADVL-201ENST00000322910 TARBP1Q13395 1621 aaKnown RBP29.64■■■□□ 2.33
ACADVL-201ENST00000322910 RANGAP1P46060 587 aaPredicted RBP29.62■■■□□ 2.33
ACADVL-201ENST00000322910 GAPVD1Q14C86 1478 aa29.59■■■□□ 2.33
ACADVL-201ENST00000322910 THOC2Q8NI27 1593 aaKnown RBP29.57■■■□□ 2.32
ACADVL-201ENST00000322910 ABCA5Q8WWZ7 1642 aa29.55■■■□□ 2.32
ACADVL-201ENST00000322910 CLIP1P30622 1438 aa29.55■■■□□ 2.32
ACADVL-201ENST00000322910 IFT140Q96RY7 1462 aa29.52■■■□□ 2.32
ACADVL-201ENST00000322910 AQRO60306 1485 aaKnown RBP eCLIP29.51■■■□□ 2.317e-7■■■■□ 24.7
ACADVL-201ENST00000322910 ZNF608Q9ULD9 1512 aaPredicted RBP29.44■■■□□ 2.3
ACADVL-201ENST00000322910 CUL7Q14999 1698 aa29.43■■■□□ 2.3
ACADVL-201ENST00000322910 PPARGC1BQ86YN6 1023 aaKnown RBP29.4■■■□□ 2.3
ACADVL-201ENST00000322910 PCGF6Q9BYE7 350 aa29.38■■■□□ 2.29
ACADVL-201ENST00000322910 GRIN2BQ13224 1484 aa29.33■■■□□ 2.29
ACADVL-201ENST00000322910 PBRM1Q86U86 1689 aa29.3■■■□□ 2.28
ACADVL-201ENST00000322910 TRIM26Q12899 539 aaPredicted RBP29.28■■■□□ 2.28
ACADVL-201ENST00000322910 FHAD1B1AJZ9 1412 aa29.25■■■□□ 2.27
ACADVL-201ENST00000322910 VPS8Q8N3P4 1428 aa29.25■■■□□ 2.27
ACADVL-201ENST00000322910 ARAP1Q96P48 1450 aa29.23■■■□□ 2.27
ACADVL-201ENST00000322910 EIF4G3O43432 1585 aaKnown RBP29.23■■■□□ 2.27
ACADVL-201ENST00000322910 ARHGAP35Q9NRY4 1499 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms