RNA–Protein interactions for RNA: ENST00000424867.1

PBRM1-212, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-212ENST00000424867 AEBP2Q6ZN18 517 aaPredicted RBP33.68■■■□□ 2.98
PBRM1-212ENST00000424867 CHIC1Q5VXU3 224 aa31.6■■■□□ 2.65
PBRM1-212ENST00000424867 SENP3Q9H4L4 574 aaPredicted RBP28.8■■■□□ 2.2
PBRM1-212ENST00000424867 PHF23Q9BUL5 403 aaPredicted RBP28.39■■■□□ 2.14
PBRM1-212ENST00000424867 FOXD1Q16676 465 aa26.9■■□□□ 1.9
PBRM1-212ENST00000424867 POTEDQ86YR6 584 aa25.38■■□□□ 1.65
PBRM1-212ENST00000424867 MSH5O43196 834 aa25.31■■□□□ 1.64
PBRM1-212ENST00000424867 PLPPR3Q6T4P5 718 aa25.08■■□□□ 1.61
PBRM1-212ENST00000424867 PIAS4Q8N2W9 510 aaPredicted RBP25.05■■□□□ 1.6
PBRM1-212ENST00000424867 PPP6R1Q9UPN7 881 aa24.86■■□□□ 1.57
PBRM1-212ENST00000424867 ADRA2BP18089 450 aa24.78■■□□□ 1.56
PBRM1-212ENST00000424867 MAPK8IP2Q13387 824 aaPredicted RBP22.88■■□□□ 1.25
PBRM1-212ENST00000424867 DMRT2Q9Y5R5 561 aa22.77■■□□□ 1.24
PBRM1-212ENST00000424867 SCAF1Q9H7N4 1312 aaKnown RBP22.67■■□□□ 1.22
PBRM1-212ENST00000424867 CACNB1Q02641 598 aaPredicted RBP22.01■■□□□ 1.11
PBRM1-212ENST00000424867 PPP4R3CPQ6ZMV5 832 aa21.95■■□□□ 1.1
PBRM1-212ENST00000424867 DCAF8L1A6NGE4 600 aa21.93■■□□□ 1.1
PBRM1-212ENST00000424867 HOXD11P31277 338 aaPredicted RBP21.76■■□□□ 1.07
PBRM1-212ENST00000424867 CNKSR2Q8WXI2 1034 aa21.62■■□□□ 1.05
PBRM1-212ENST00000424867 RNF39Q9H2S5 420 aa21.56■■□□□ 1.04
PBRM1-212ENST00000424867 RNF216Q9NWF9 866 aaPredicted RBP21.51■■□□□ 1.03
PBRM1-212ENST00000424867 C1QBPQ07021 282 aaKnown RBP21.23■□□□□ 0.99
PBRM1-212ENST00000424867 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
PBRM1-212ENST00000424867 NCBP3Q53F19 620 aaKnown RBP21■□□□□ 0.95
PBRM1-212ENST00000424867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.8■□□□□ 0.921e-6■■□□□ 12.1
PBRM1-212ENST00000424867 NPM3O75607 178 aaKnown RBP20.67■□□□□ 0.9
PBRM1-212ENST00000424867 U3KPZ7 1027 aaPredicted RBP20.27■□□□□ 0.84
PBRM1-212ENST00000424867 CAPN15O75808 1086 aa20.13■□□□□ 0.81
PBRM1-212ENST00000424867 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
PBRM1-212ENST00000424867 DSG3P32926 999 aa20.07■□□□□ 0.8
PBRM1-212ENST00000424867 KCNA4P22459 653 aa19.93■□□□□ 0.78
PBRM1-212ENST00000424867 SLC4A2P04920 1241 aa19.84■□□□□ 0.77
PBRM1-212ENST00000424867 POTEHQ6S545 545 aa19.82■□□□□ 0.76
PBRM1-212ENST00000424867 TRHP20396 242 aaPredicted RBP19.72■□□□□ 0.75
PBRM1-212ENST00000424867 APLP2Q06481 763 aa19.68■□□□□ 0.74
PBRM1-212ENST00000424867 ZNF219Q9P2Y4 722 aaPredicted RBP19.63■□□□□ 0.73
PBRM1-212ENST00000424867 ABCB7O75027 752 aa19.62■□□□□ 0.73
PBRM1-212ENST00000424867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
PBRM1-212ENST00000424867 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
PBRM1-212ENST00000424867 SAMD1Q6SPF0 538 aaPredicted RBP19.44■□□□□ 0.7
PBRM1-212ENST00000424867 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
PBRM1-212ENST00000424867 MYCNP04198 464 aaPredicted RBP19.12■□□□□ 0.65
PBRM1-212ENST00000424867 POLA2Q14181 598 aa19.09■□□□□ 0.65
PBRM1-212ENST00000424867 CHRDL2Q6WN34 429 aa18.9■□□□□ 0.62
PBRM1-212ENST00000424867 SLC4A1APQ9BWU0 796 aaKnown RBP18.75■□□□□ 0.59
PBRM1-212ENST00000424867 ATF5Q9Y2D1 282 aaPredicted RBP18.73■□□□□ 0.59
PBRM1-212ENST00000424867 FOXD4L1Q9NU39 408 aa18.71■□□□□ 0.59
PBRM1-212ENST00000424867 AKT1S1Q96B36 256 aa18.64■□□□□ 0.57
PBRM1-212ENST00000424867 ZBTB12Q9Y330 459 aaPredicted RBP18.64■□□□□ 0.57
PBRM1-212ENST00000424867 REM2Q8IYK8 340 aaPredicted RBP18.48■□□□□ 0.55
PBRM1-212ENST00000424867 OSCARQ8IYS5 282 aa18.47■□□□□ 0.55
PBRM1-212ENST00000424867 SP7Q8TDD2 431 aaPredicted RBP18.39■□□□□ 0.53
PBRM1-212ENST00000424867 PIP4P2Q8N4L2 257 aa18.37■□□□□ 0.53
PBRM1-212ENST00000424867 ZBTB22O15209 634 aa18.3■□□□□ 0.52
PBRM1-212ENST00000424867 PITPNM1O00562 1244 aa18.28■□□□□ 0.52
PBRM1-212ENST00000424867 HAX1O00165 279 aa18.19■□□□□ 0.5
PBRM1-212ENST00000424867 FXR2P51116 673 aaKnown RBP eCLIP18.18■□□□□ 0.5
PBRM1-212ENST00000424867 ATXN8OSP0DMR3 200 aa18.17■□□□□ 0.5
PBRM1-212ENST00000424867 FBLN2P98095 1184 aa18.04■□□□□ 0.48
PBRM1-212ENST00000424867 SPDYE2BA6NHP3 402 aa18.03■□□□□ 0.48
PBRM1-212ENST00000424867 SPDYE6P0CI01 402 aa18.03■□□□□ 0.48
PBRM1-212ENST00000424867 SPDYE2Q495Y8 402 aa18.03■□□□□ 0.48
PBRM1-212ENST00000424867 EVX2Q03828 476 aa17.9■□□□□ 0.46
PBRM1-212ENST00000424867 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
PBRM1-212ENST00000424867 MKRN4PQ13434 485 aaPredicted RBP17.83■□□□□ 0.44
PBRM1-212ENST00000424867 SPDYE1Q8NFV5 336 aaPredicted RBP17.83■□□□□ 0.44
PBRM1-212ENST00000424867 PRKAR2AP13861 404 aaKnown RBP17.82■□□□□ 0.44
PBRM1-212ENST00000424867 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
PBRM1-212ENST00000424867 SSUH2Q9Y2M2 353 aa17.73■□□□□ 0.43
PBRM1-212ENST00000424867 C19orf67A6NJJ6 358 aa17.62■□□□□ 0.41
PBRM1-212ENST00000424867 CHADLQ6NUI6 762 aa17.54■□□□□ 0.4
PBRM1-212ENST00000424867 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
PBRM1-212ENST00000424867 PRR29P0C7W0 189 aa17.5■□□□□ 0.39
PBRM1-212ENST00000424867 GABBR2O75899 941 aa17.48■□□□□ 0.39
PBRM1-212ENST00000424867 LHX8Q68G74 356 aa17.27■□□□□ 0.36
PBRM1-212ENST00000424867 FARP1Q9Y4F1 1045 aaPredicted RBP17.23■□□□□ 0.35
PBRM1-212ENST00000424867 CD44P16070 742 aaKnown RBP17.22■□□□□ 0.35
PBRM1-212ENST00000424867 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
PBRM1-212ENST00000424867 POTEIP0CG38 1075 aa17.09■□□□□ 0.33
PBRM1-212ENST00000424867 CLCN6P51797 869 aa17.04■□□□□ 0.32
PBRM1-212ENST00000424867 DCBLD2Q96PD2 775 aa16.95■□□□□ 0.3
PBRM1-212ENST00000424867 CREBZFQ9NS37 354 aa16.94■□□□□ 0.3
PBRM1-212ENST00000424867 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
PBRM1-212ENST00000424867 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
PBRM1-212ENST00000424867 ZNF579Q8NAF0 562 aaKnown RBP16.91■□□□□ 0.3
PBRM1-212ENST00000424867 SPDYE4A6NLX3 237 aa16.82■□□□□ 0.28
PBRM1-212ENST00000424867 GALR2O43603 387 aaPredicted RBP16.75■□□□□ 0.27
PBRM1-212ENST00000424867 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
PBRM1-212ENST00000424867 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
PBRM1-212ENST00000424867 PHF12Q96QT6 1004 aa16.65■□□□□ 0.26
PBRM1-212ENST00000424867 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
PBRM1-212ENST00000424867 MNX1P50219 401 aaPredicted RBP16.57■□□□□ 0.24
PBRM1-212ENST00000424867 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
PBRM1-212ENST00000424867 POTEB2H3BUK9 544 aa16.52■□□□□ 0.24
PBRM1-212ENST00000424867 PLSCR2Q9NRY7 297 aa16.51■□□□□ 0.23
PBRM1-212ENST00000424867 PELP1Q8IZL8 1130 aaKnown RBP16.47■□□□□ 0.23
PBRM1-212ENST00000424867 MS4A3Q96HJ5 214 aa16.4■□□□□ 0.22
PBRM1-212ENST00000424867 ASTLQ6HA08 431 aaPredicted RBP16.36■□□□□ 0.21
PBRM1-212ENST00000424867 ATMINO43313 823 aaPredicted RBP16.34■□□□□ 0.21
PBRM1-212ENST00000424867 TSPYL2Q9H2G4 693 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms