RNA–Protein interactions for RNA: ENST00000479225.1

MCFD2-215, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 3

Gene MCFD2, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-215ENST00000479225 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
MCFD2-215ENST00000479225 CCDC180Q9P1Z9 1646 aa28.89■■■□□ 2.22
MCFD2-215ENST00000479225 ABCC9O60706 1549 aa28.35■■■□□ 2.13
MCFD2-215ENST00000479225 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
MCFD2-215ENST00000479225 NACADO15069 1562 aa27.26■■□□□ 1.95
MCFD2-215ENST00000479225 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
MCFD2-215ENST00000479225 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
MCFD2-215ENST00000479225 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
MCFD2-215ENST00000479225 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
MCFD2-215ENST00000479225 UNC13AQ9UPW8 1703 aa26.55■■□□□ 1.84
MCFD2-215ENST00000479225 SHROOM4Q9ULL8 1493 aa26.39■■□□□ 1.82
MCFD2-215ENST00000479225 BICRAQ9NZM4 1560 aa26.38■■□□□ 1.81
MCFD2-215ENST00000479225 PABPN1Q86U42 306 aaKnown RBP eCLIP26.37■■□□□ 1.81
MCFD2-215ENST00000479225 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
MCFD2-215ENST00000479225 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
MCFD2-215ENST00000479225 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
MCFD2-215ENST00000479225 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
MCFD2-215ENST00000479225 CECR2Q9BXF3 1484 aa25.61■■□□□ 1.69
MCFD2-215ENST00000479225 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
MCFD2-215ENST00000479225 SMARCA2P51531 1590 aa25.06■■□□□ 1.6
MCFD2-215ENST00000479225 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
MCFD2-215ENST00000479225 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
MCFD2-215ENST00000479225 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
MCFD2-215ENST00000479225 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
MCFD2-215ENST00000479225 PEG3Q9GZU2 1588 aa24.92■■□□□ 1.58
MCFD2-215ENST00000479225 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
MCFD2-215ENST00000479225 MROH2BQ7Z745 1585 aa24.71■■□□□ 1.55
MCFD2-215ENST00000479225 ERCC6Q03468 1493 aa24.57■■□□□ 1.52
MCFD2-215ENST00000479225 CUX2O14529 1486 aa24.55■■□□□ 1.52
MCFD2-215ENST00000479225 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
MCFD2-215ENST00000479225 WIZO95785 1651 aa24.41■■□□□ 1.5
MCFD2-215ENST00000479225 NESP48681 1621 aa24.39■■□□□ 1.5
MCFD2-215ENST00000479225 PDS5BQ9NTI5 1447 aa24.38■■□□□ 1.49
MCFD2-215ENST00000479225 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
MCFD2-215ENST00000479225 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
MCFD2-215ENST00000479225 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
MCFD2-215ENST00000479225 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
MCFD2-215ENST00000479225 KIF21AQ7Z4S6 1674 aa24.16■■□□□ 1.46
MCFD2-215ENST00000479225 CFTRP13569 1480 aa24.13■■□□□ 1.45
MCFD2-215ENST00000479225 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
MCFD2-215ENST00000479225 MRC2Q9UBG0 1479 aa24.08■■□□□ 1.45
MCFD2-215ENST00000479225 CEP164Q9UPV0 1460 aa24.05■■□□□ 1.44
MCFD2-215ENST00000479225 WDR62O43379 1518 aa24.02■■□□□ 1.44
MCFD2-215ENST00000479225 FANCD2Q9BXW9 1451 aa24.01■■□□□ 1.43
MCFD2-215ENST00000479225 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
MCFD2-215ENST00000479225 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
MCFD2-215ENST00000479225 ABCC8Q09428 1581 aa23.75■■□□□ 1.39
MCFD2-215ENST00000479225 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
MCFD2-215ENST00000479225 IFT140Q96RY7 1462 aa23.6■■□□□ 1.37
MCFD2-215ENST00000479225 TOPBP1Q92547 1522 aa23.58■■□□□ 1.36
MCFD2-215ENST00000479225 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
MCFD2-215ENST00000479225 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
MCFD2-215ENST00000479225 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
MCFD2-215ENST00000479225 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
MCFD2-215ENST00000479225 POLA1P09884 1462 aaPredicted RBP23.35■■□□□ 1.33
MCFD2-215ENST00000479225 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
MCFD2-215ENST00000479225 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
MCFD2-215ENST00000479225 EIF4G3O43432 1585 aaKnown RBP23.31■■□□□ 1.32
MCFD2-215ENST00000479225 SOGA1O94964 1423 aa23.26■■□□□ 1.31
MCFD2-215ENST00000479225 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
MCFD2-215ENST00000479225 CUX1P39880 1505 aa23.23■■□□□ 1.31
MCFD2-215ENST00000479225 AQRO60306 1485 aaKnown RBP eCLIP23.18■■□□□ 1.32e-6■■■■□ 23.2
MCFD2-215ENST00000479225 RAD54L2Q9Y4B4 1467 aa23.16■■□□□ 1.3
MCFD2-215ENST00000479225 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
MCFD2-215ENST00000479225 TDRD9Q8NDG6 1382 aaKnown RBP23.09■■□□□ 1.29
MCFD2-215ENST00000479225 GRIN2BQ13224 1484 aa23.09■■□□□ 1.29
MCFD2-215ENST00000479225 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
MCFD2-215ENST00000479225 CHD1O14646 1710 aa23.05■■□□□ 1.28
MCFD2-215ENST00000479225 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
MCFD2-215ENST00000479225 TOP2BQ02880 1626 aa23.02■■□□□ 1.28
MCFD2-215ENST00000479225 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
MCFD2-215ENST00000479225 GAPVD1Q14C86 1478 aa23.01■■□□□ 1.27
MCFD2-215ENST00000479225 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
MCFD2-215ENST00000479225 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
MCFD2-215ENST00000479225 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
MCFD2-215ENST00000479225 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
MCFD2-215ENST00000479225 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
MCFD2-215ENST00000479225 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
MCFD2-215ENST00000479225 FBLN2P98095 1184 aa22.97■■□□□ 1.27
MCFD2-215ENST00000479225 ARHGEF11O15085 1522 aa22.97■■□□□ 1.27
MCFD2-215ENST00000479225 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
MCFD2-215ENST00000479225 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
MCFD2-215ENST00000479225 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
MCFD2-215ENST00000479225 PBRM1Q86U86 1689 aa22.94■■□□□ 1.26
MCFD2-215ENST00000479225 CLASP1Q7Z460 1538 aa22.87■■□□□ 1.25
MCFD2-215ENST00000479225 ERICH3Q5RHP9 1530 aa22.82■■□□□ 1.24
MCFD2-215ENST00000479225 FHAD1B1AJZ9 1412 aa22.77■■□□□ 1.24
MCFD2-215ENST00000479225 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
MCFD2-215ENST00000479225 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
MCFD2-215ENST00000479225 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
MCFD2-215ENST00000479225 CYB5RLQ6IPT4 315 aa22.72■■□□□ 1.23
MCFD2-215ENST00000479225 NUP160Q12769 1436 aa22.69■■□□□ 1.22
MCFD2-215ENST00000479225 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
MCFD2-215ENST00000479225 CEP170Q5SW79 1584 aa22.58■■□□□ 1.2
MCFD2-215ENST00000479225 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
MCFD2-215ENST00000479225 CUL7Q14999 1698 aa22.55■■□□□ 1.2
MCFD2-215ENST00000479225 IGF1RP08069 1367 aa22.5■■□□□ 1.19
MCFD2-215ENST00000479225 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
MCFD2-215ENST00000479225 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
MCFD2-215ENST00000479225 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms