RNA–Protein interactions for RNA: ENST00000543245.6

ACADVL-205, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2 BASIC

Gene ACADVL, Length 2,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-205ENST00000543245 NISCHQ9Y2I1 1504 aa41.16■■■■■ 4.18
ACADVL-205ENST00000543245 CCDC180Q9P1Z9 1646 aa35.96■■■■□ 3.35
ACADVL-205ENST00000543245 ZCCHC6Q5VYS8 1495 aaKnown RBP34.64■■■■□ 3.14
ACADVL-205ENST00000543245 DCAF1Q9Y4B6 1507 aa34.03■■■■□ 3.04
ACADVL-205ENST00000543245 ABCC9O60706 1549 aa33.81■■■■□ 3
ACADVL-205ENST00000543245 DCAF8L2P0C7V8 631 aa33.81■■■■□ 3
ACADVL-205ENST00000543245 SHROOM4Q9ULL8 1493 aa33.62■■■□□ 2.97
ACADVL-205ENST00000543245 MYO15BQ96JP2 1530 aa33.57■■■□□ 2.97
ACADVL-205ENST00000543245 NACADO15069 1562 aa33.37■■■□□ 2.93
ACADVL-205ENST00000543245 RB1CC1Q8TDY2 1594 aa33.08■■■□□ 2.89
ACADVL-205ENST00000543245 SCRIBQ14160 1630 aa33.07■■■□□ 2.89
ACADVL-205ENST00000543245 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
ACADVL-205ENST00000543245 SUPT5HO00267 1087 aaKnown RBP32.31■■■□□ 2.76
ACADVL-205ENST00000543245 BICRAQ9NZM4 1560 aa32.13■■■□□ 2.73
ACADVL-205ENST00000543245 CECR2Q9BXF3 1484 aa31.97■■■□□ 2.71
ACADVL-205ENST00000543245 RSF1Q96T23 1441 aaPredicted RBP31.93■■■□□ 2.7
ACADVL-205ENST00000543245 MROH2BQ7Z745 1585 aa31.83■■■□□ 2.69
ACADVL-205ENST00000543245 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.685e-9■■■■■ 34.2
ACADVL-205ENST00000543245 BAZ1AQ9NRL2 1556 aaPredicted RBP31.79■■■□□ 2.68
ACADVL-205ENST00000543245 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
ACADVL-205ENST00000543245 WIZO95785 1651 aa31.63■■■□□ 2.65
ACADVL-205ENST00000543245 PEG3Q9GZU2 1588 aa31.28■■■□□ 2.6
ACADVL-205ENST00000543245 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
ACADVL-205ENST00000543245 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.57
ACADVL-205ENST00000543245 SMARCA2P51531 1590 aa31.08■■■□□ 2.57
ACADVL-205ENST00000543245 ATAD2BQ9ULI0 1458 aa31.06■■■□□ 2.56
ACADVL-205ENST00000543245 CHIC1Q5VXU3 224 aa30.98■■■□□ 2.55
ACADVL-205ENST00000543245 BAZ1BQ9UIG0 1483 aaKnown RBP30.91■■■□□ 2.54
ACADVL-205ENST00000543245 CCDC88BA6NC98 1476 aa30.88■■■□□ 2.53
ACADVL-205ENST00000543245 HMGXB3Q12766 1538 aa30.81■■■□□ 2.52
ACADVL-205ENST00000543245 NCAPD3P42695 1498 aa30.74■■■□□ 2.51
ACADVL-205ENST00000543245 CC2D2AQ9P2K1 1620 aa30.66■■■□□ 2.5
ACADVL-205ENST00000543245 ABCC8Q09428 1581 aa30.36■■■□□ 2.45
ACADVL-205ENST00000543245 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
ACADVL-205ENST00000543245 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
ACADVL-205ENST00000543245 CFTRP13569 1480 aa30.12■■■□□ 2.41
ACADVL-205ENST00000543245 WRNQ14191 1432 aaPredicted RBP eCLIP30.06■■■□□ 2.4
ACADVL-205ENST00000543245 SYNJ1O43426 1573 aa30.04■■■□□ 2.4
ACADVL-205ENST00000543245 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
ACADVL-205ENST00000543245 BIVM-ERCC5R4GMW8 1640 aa29.89■■■□□ 2.38
ACADVL-205ENST00000543245 TOP2BQ02880 1626 aa29.89■■■□□ 2.37
ACADVL-205ENST00000543245 FAM9AQ8IZU1 332 aaPredicted RBP29.83■■■□□ 2.37
ACADVL-205ENST00000543245 LOC105371045A0A1W2PR82 267 aa29.79■■■□□ 2.36
ACADVL-205ENST00000543245 CUX1P39880 1505 aa29.77■■■□□ 2.36
ACADVL-205ENST00000543245 LAMC3Q9Y6N6 1575 aa29.76■■■□□ 2.35
ACADVL-205ENST00000543245 NESP48681 1621 aa29.74■■■□□ 2.35
ACADVL-205ENST00000543245 DNAJC5BQ9UF47 199 aa29.74■■■□□ 2.35
ACADVL-205ENST00000543245 SOGA1O94964 1423 aa29.72■■■□□ 2.35
ACADVL-205ENST00000543245 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
ACADVL-205ENST00000543245 EEA1Q15075 1411 aa29.65■■■□□ 2.34
ACADVL-205ENST00000543245 RUSC2Q8N2Y8 1516 aa29.63■■■□□ 2.33
ACADVL-205ENST00000543245 KIF21AQ7Z4S6 1674 aa29.5■■■□□ 2.31
ACADVL-205ENST00000543245 CEP164Q9UPV0 1460 aa29.5■■■□□ 2.31
ACADVL-205ENST00000543245 DNMBPQ6XZF7 1577 aa29.48■■■□□ 2.31
ACADVL-205ENST00000543245 EHMT2Q96KQ7 1210 aa29.44■■■□□ 2.3
ACADVL-205ENST00000543245 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
ACADVL-205ENST00000543245 FGD5Q6ZNL6 1462 aa29.41■■■□□ 2.3
ACADVL-205ENST00000543245 CSRNP3Q8WYN3 585 aa29.4■■■□□ 2.3
ACADVL-205ENST00000543245 TOPBP1Q92547 1522 aa29.39■■■□□ 2.3
ACADVL-205ENST00000543245 KIF21BO75037 1637 aa29.38■■■□□ 2.29
ACADVL-205ENST00000543245 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
ACADVL-205ENST00000543245 GOLGA3Q08378 1498 aa29.3■■■□□ 2.28
ACADVL-205ENST00000543245 KIF27Q86VH2 1401 aa29.27■■■□□ 2.28
ACADVL-205ENST00000543245 POLA1P09884 1462 aaPredicted RBP29.25■■■□□ 2.27
ACADVL-205ENST00000543245 CUX2O14529 1486 aa29.2■■■□□ 2.27
ACADVL-205ENST00000543245 WDR97A6NE52 1622 aa29.18■■■□□ 2.26
ACADVL-205ENST00000543245 TNIKQ9UKE5 1360 aa29.16■■■□□ 2.26
ACADVL-205ENST00000543245 RAD54L2Q9Y4B4 1467 aa29.14■■■□□ 2.26
ACADVL-205ENST00000543245 RAPGEF2Q9Y4G8 1499 aa29.14■■■□□ 2.26
ACADVL-205ENST00000543245 ERICH3Q5RHP9 1530 aa29.13■■■□□ 2.25
ACADVL-205ENST00000543245 ABCA10Q8WWZ4 1543 aa29.13■■■□□ 2.25
ACADVL-205ENST00000543245 PRXQ9BXM0 1461 aa29.13■■■□□ 2.25
ACADVL-205ENST00000543245 MRC2Q9UBG0 1479 aa29.12■■■□□ 2.25
ACADVL-205ENST00000543245 CEP162Q5TB80 1403 aa29.08■■■□□ 2.25
ACADVL-205ENST00000543245 UBTFP17480 764 aaKnown RBP29.05■■■□□ 2.24
ACADVL-205ENST00000543245 WDR62O43379 1518 aa29.01■■■□□ 2.23
ACADVL-205ENST00000543245 TARBP1Q13395 1621 aaKnown RBP28.99■■■□□ 2.23
ACADVL-205ENST00000543245 ABCA5Q8WWZ7 1642 aa28.98■■■□□ 2.23
ACADVL-205ENST00000543245 ERCC6Q03468 1493 aa28.97■■■□□ 2.23
ACADVL-205ENST00000543245 THOC2Q8NI27 1593 aaKnown RBP28.96■■■□□ 2.23
ACADVL-205ENST00000543245 IGF1RP08069 1367 aa28.96■■■□□ 2.23
ACADVL-205ENST00000543245 CUL7Q14999 1698 aa28.89■■■□□ 2.22
ACADVL-205ENST00000543245 CARMIL1Q5VZK9 1371 aa28.83■■■□□ 2.21
ACADVL-205ENST00000543245 GAPVD1Q14C86 1478 aa28.81■■■□□ 2.2
ACADVL-205ENST00000543245 PBRM1Q86U86 1689 aa28.81■■■□□ 2.2
ACADVL-205ENST00000543245 CLIP1P30622 1438 aa28.8■■■□□ 2.2
ACADVL-205ENST00000543245 TDRD9Q8NDG6 1382 aaKnown RBP28.79■■■□□ 2.2
ACADVL-205ENST00000543245 IFT140Q96RY7 1462 aa28.75■■■□□ 2.19
ACADVL-205ENST00000543245 CTTNBP2Q8WZ74 1663 aa28.66■■■□□ 2.18
ACADVL-205ENST00000543245 ZNF608Q9ULD9 1512 aaPredicted RBP28.63■■■□□ 2.17
ACADVL-205ENST00000543245 EIF4G3O43432 1585 aaKnown RBP28.63■■■□□ 2.17
ACADVL-205ENST00000543245 AQRO60306 1485 aaKnown RBP eCLIP28.62■■■□□ 2.177e-7■■■■□ 24.7
ACADVL-205ENST00000543245 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
ACADVL-205ENST00000543245 RANGAP1P46060 587 aaPredicted RBP28.59■■■□□ 2.17
ACADVL-205ENST00000543245 VPS8Q8N3P4 1428 aa28.58■■■□□ 2.17
ACADVL-205ENST00000543245 ARAP1Q96P48 1450 aa28.58■■■□□ 2.17
ACADVL-205ENST00000543245 GRIN2BQ13224 1484 aa28.56■■■□□ 2.16
ACADVL-205ENST00000543245 ARHGAP35Q9NRY4 1499 aa28.53■■■□□ 2.16
ACADVL-205ENST00000543245 PCGF6Q9BYE7 350 aa28.53■■■□□ 2.16
ACADVL-205ENST00000543245 HRCP23327 699 aa28.51■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms