RNA–Protein interactions for RNA: ENST00000378567.7

PRKCZ-201, Transcript of protein kinase C zeta, humanhuman

APPRIS P1 TSL 1 (best)

Gene PRKCZ, Length 2,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCZ-201ENST00000378567 NISCHQ9Y2I1 1504 aa48.87■■■■■ 5.41
PRKCZ-201ENST00000378567 CCDC180Q9P1Z9 1646 aa42.09■■■■■ 4.33
PRKCZ-201ENST00000378567 ZCCHC6Q5VYS8 1495 aaKnown RBP41.22■■■■■ 4.19
PRKCZ-201ENST00000378567 SHROOM4Q9ULL8 1493 aa40.8■■■■■ 4.12
PRKCZ-201ENST00000378567 DCAF8L2P0C7V8 631 aa40.36■■■■■ 4.05
PRKCZ-201ENST00000378567 DCAF1Q9Y4B6 1507 aa40.23■■■■■ 4.03
PRKCZ-201ENST00000378567 SUPT5HO00267 1087 aaKnown RBP39.63■■■■□ 3.93
PRKCZ-201ENST00000378567 MYO15BQ96JP2 1530 aa39.38■■■■□ 3.89
PRKCZ-201ENST00000378567 ABCC9O60706 1549 aa39.33■■■■□ 3.89
PRKCZ-201ENST00000378567 SCRIBQ14160 1630 aa39.1■■■■□ 3.85
PRKCZ-201ENST00000378567 NACADO15069 1562 aa39■■■■□ 3.83
PRKCZ-201ENST00000378567 RB1CC1Q8TDY2 1594 aa38.51■■■■□ 3.76
PRKCZ-201ENST00000378567 RSF1Q96T23 1441 aaPredicted RBP38.3■■■■□ 3.72
PRKCZ-201ENST00000378567 CHIC1Q5VXU3 224 aa38.27■■■■□ 3.72
PRKCZ-201ENST00000378567 CECR2Q9BXF3 1484 aa38.06■■■■□ 3.68
PRKCZ-201ENST00000378567 UNC13AQ9UPW8 1703 aa37.93■■■■□ 3.66
PRKCZ-201ENST00000378567 MROH2BQ7Z745 1585 aa37.89■■■■□ 3.66
PRKCZ-201ENST00000378567 WIZO95785 1651 aa37.67■■■■□ 3.62
PRKCZ-201ENST00000378567 BAZ1AQ9NRL2 1556 aaPredicted RBP37.62■■■■□ 3.61
PRKCZ-201ENST00000378567 BICRAQ9NZM4 1560 aa37.45■■■■□ 3.59
PRKCZ-201ENST00000378567 SMARCA4P51532 1647 aa37.41■■■■□ 3.58
PRKCZ-201ENST00000378567 PABPN1Q86U42 306 aaKnown RBP eCLIP37.33■■■■□ 3.57
PRKCZ-201ENST00000378567 TOP2AP11388 1531 aaKnown RBP37.16■■■■□ 3.54
PRKCZ-201ENST00000378567 TRIM41Q8WV44 630 aa37.06■■■■□ 3.52
PRKCZ-201ENST00000378567 LOC105371045A0A1W2PR82 267 aa36.99■■■■□ 3.51
PRKCZ-201ENST00000378567 EIF4G1Q04637 1599 aaKnown RBP36.94■■■■□ 3.5
PRKCZ-201ENST00000378567 SMARCA2P51531 1590 aa36.9■■■■□ 3.5
PRKCZ-201ENST00000378567 CCDC88BA6NC98 1476 aa36.87■■■■□ 3.49
PRKCZ-201ENST00000378567 PEG3Q9GZU2 1588 aa36.8■■■■□ 3.48
PRKCZ-201ENST00000378567 FAM9AQ8IZU1 332 aaPredicted RBP36.6■■■■□ 3.45
PRKCZ-201ENST00000378567 ATAD2BQ9ULI0 1458 aa36.57■■■■□ 3.45
PRKCZ-201ENST00000378567 ABCC8Q09428 1581 aa36.5■■■■□ 3.43
PRKCZ-201ENST00000378567 BAZ1BQ9UIG0 1483 aaKnown RBP36.43■■■■□ 3.42
PRKCZ-201ENST00000378567 EHMT2Q96KQ7 1210 aa36.22■■■■□ 3.39
PRKCZ-201ENST00000378567 PCGF6Q9BYE7 350 aa36.18■■■■□ 3.38
PRKCZ-201ENST00000378567 HMGXB3Q12766 1538 aa36.04■■■■□ 3.36
PRKCZ-201ENST00000378567 NCAPD3P42695 1498 aa36.03■■■■□ 3.36
PRKCZ-201ENST00000378567 WRNQ14191 1432 aaPredicted RBP eCLIP36.01■■■■□ 3.36
PRKCZ-201ENST00000378567 SOGA1O94964 1423 aa35.96■■■■□ 3.35
PRKCZ-201ENST00000378567 SYNJ1O43426 1573 aa35.91■■■■□ 3.34
PRKCZ-201ENST00000378567 RUSC2Q8N2Y8 1516 aa35.82■■■■□ 3.32
PRKCZ-201ENST00000378567 EEA1Q15075 1411 aa35.8■■■■□ 3.32
PRKCZ-201ENST00000378567 TRIM26Q12899 539 aaPredicted RBP35.79■■■■□ 3.32
PRKCZ-201ENST00000378567 HRCP23327 699 aa35.74■■■■□ 3.31
PRKCZ-201ENST00000378567 CSRNP3Q8WYN3 585 aa35.67■■■■□ 3.3
PRKCZ-201ENST00000378567 TOP2BQ02880 1626 aa35.58■■■■□ 3.29
PRKCZ-201ENST00000378567 CC2D2AQ9P2K1 1620 aa35.52■■■■□ 3.28
PRKCZ-201ENST00000378567 BIVM-ERCC5R4GMW8 1640 aa35.52■■■■□ 3.28
PRKCZ-201ENST00000378567 CFTRP13569 1480 aa35.51■■■■□ 3.28
PRKCZ-201ENST00000378567 TNIKQ9UKE5 1360 aa35.5■■■■□ 3.27
PRKCZ-201ENST00000378567 CEP162Q5TB80 1403 aa35.47■■■■□ 3.27
PRKCZ-201ENST00000378567 GOLGA3Q08378 1498 aa35.47■■■■□ 3.27
PRKCZ-201ENST00000378567 KIF21BO75037 1637 aa35.39■■■■□ 3.26
PRKCZ-201ENST00000378567 UBTFP17480 764 aaKnown RBP35.38■■■■□ 3.25
PRKCZ-201ENST00000378567 PRDM2Q13029 1718 aa35.36■■■■□ 3.25
PRKCZ-201ENST00000378567 CUX1P39880 1505 aa35.36■■■■□ 3.25
PRKCZ-201ENST00000378567 CEP164Q9UPV0 1460 aa35.36■■■■□ 3.25
PRKCZ-201ENST00000378567 PPARGC1BQ86YN6 1023 aaKnown RBP35.3■■■■□ 3.24
PRKCZ-201ENST00000378567 CADPSQ9ULU8 1353 aa35.22■■■■□ 3.23
PRKCZ-201ENST00000378567 RAPGEF2Q9Y4G8 1499 aa35.15■■■■□ 3.22
PRKCZ-201ENST00000378567 CLIP1P30622 1438 aa34.98■■■■□ 3.19
PRKCZ-201ENST00000378567 KIF27Q86VH2 1401 aa34.97■■■■□ 3.19
PRKCZ-201ENST00000378567 PRXQ9BXM0 1461 aa34.97■■■■□ 3.19
PRKCZ-201ENST00000378567 ERICH3Q5RHP9 1530 aa34.95■■■■□ 3.19
PRKCZ-201ENST00000378567 FANCD2Q9BXW9 1451 aa34.89■■■■□ 3.18
PRKCZ-201ENST00000378567 TTBK1Q5TCY1 1321 aaPredicted RBP34.88■■■■□ 3.17
PRKCZ-201ENST00000378567 FGD5Q6ZNL6 1462 aa34.83■■■■□ 3.17
PRKCZ-201ENST00000378567 NESP48681 1621 aa34.83■■■■□ 3.17
PRKCZ-201ENST00000378567 CUX2O14529 1486 aa34.78■■■■□ 3.16
PRKCZ-201ENST00000378567 VPS8Q8N3P4 1428 aa34.76■■■■□ 3.16
PRKCZ-201ENST00000378567 RANGAP1P46060 587 aaPredicted RBP34.76■■■■□ 3.15
PRKCZ-201ENST00000378567 ZEB1P37275 1124 aaPredicted RBP34.7■■■■□ 3.14
PRKCZ-201ENST00000378567 DNMBPQ6XZF7 1577 aa34.68■■■■□ 3.14
PRKCZ-201ENST00000378567 LAMC3Q9Y6N6 1575 aa34.66■■■■□ 3.14
PRKCZ-201ENST00000378567 IGF1RP08069 1367 aa34.62■■■■□ 3.13
PRKCZ-201ENST00000378567 TOPBP1Q92547 1522 aa34.61■■■■□ 3.13
PRKCZ-201ENST00000378567 DNAJC5BQ9UF47 199 aa34.59■■■■□ 3.13
PRKCZ-201ENST00000378567 ARAP1Q96P48 1450 aa34.56■■■■□ 3.12
PRKCZ-201ENST00000378567 POLA1P09884 1462 aaPredicted RBP34.52■■■■□ 3.12
PRKCZ-201ENST00000378567 RAD54L2Q9Y4B4 1467 aa34.51■■■■□ 3.11
PRKCZ-201ENST00000378567 CARMIL1Q5VZK9 1371 aa34.46■■■■□ 3.11
PRKCZ-201ENST00000378567 ABCA10Q8WWZ4 1543 aa34.46■■■■□ 3.11
PRKCZ-201ENST00000378567 URB2Q14146 1524 aaKnown RBP34.45■■■■□ 3.1
PRKCZ-201ENST00000378567 APLP2Q06481 763 aa34.44■■■■□ 3.1
PRKCZ-201ENST00000378567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.44■■■■□ 3.1
PRKCZ-201ENST00000378567 PDS5BQ9NTI5 1447 aa34.38■■■■□ 3.09
PRKCZ-201ENST00000378567 ARHGAP35Q9NRY4 1499 aa34.38■■■■□ 3.09
PRKCZ-201ENST00000378567 KIF21AQ7Z4S6 1674 aa34.35■■■■□ 3.09
PRKCZ-201ENST00000378567 CCER1Q8TC90 406 aaPredicted RBP34.32■■■■□ 3.09
PRKCZ-201ENST00000378567 WDR97A6NE52 1622 aa34.3■■■■□ 3.08
PRKCZ-201ENST00000378567 CUL7Q14999 1698 aa34.2■■■■□ 3.07
PRKCZ-201ENST00000378567 ABCA5Q8WWZ7 1642 aa34.14■■■■□ 3.06
PRKCZ-201ENST00000378567 KANK4Q5T7N3 995 aaPredicted RBP34.12■■■■□ 3.05
PRKCZ-201ENST00000378567 HNRNPUL2Q1KMD3 747 aaKnown RBP34.1■■■■□ 3.05
PRKCZ-201ENST00000378567 TDRD9Q8NDG6 1382 aaKnown RBP34.09■■■■□ 3.05
PRKCZ-201ENST00000378567 GAPVD1Q14C86 1478 aa34.03■■■■□ 3.04
PRKCZ-201ENST00000378567 CTTNBP2Q8WZ74 1663 aa34.02■■■■□ 3.04
PRKCZ-201ENST00000378567 TARBP1Q13395 1621 aaKnown RBP34.01■■■■□ 3.03
PRKCZ-201ENST00000378567 MRC2Q9UBG0 1479 aa33.94■■■■□ 3.02
PRKCZ-201ENST00000378567 TIAM1Q13009 1591 aa33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms