RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 DCAF8L2P0C7V8 631 aa41.51■■■■■ 4.24
RAPGEF1-203ENST00000372195 SUPT5HO00267 1087 aaKnown RBP39.65■■■■□ 3.94
RAPGEF1-203ENST00000372195 EHMT2Q96KQ7 1210 aa39.09■■■■□ 3.85
RAPGEF1-203ENST00000372195 SHROOM4Q9ULL8 1493 aa38.95■■■■□ 3.83
RAPGEF1-203ENST00000372195 NISCHQ9Y2I1 1504 aa38.28■■■■□ 3.72
RAPGEF1-203ENST00000372195 TTBK1Q5TCY1 1321 aaPredicted RBP37.76■■■■□ 3.64
RAPGEF1-203ENST00000372195 PELP1Q8IZL8 1130 aaKnown RBP37.76■■■■□ 3.63
RAPGEF1-203ENST00000372195 FAM9AQ8IZU1 332 aaPredicted RBP37.6■■■■□ 3.61
RAPGEF1-203ENST00000372195 APLP2Q06481 763 aa37.44■■■■□ 3.58
RAPGEF1-203ENST00000372195 PCGF6Q9BYE7 350 aa37.43■■■■□ 3.58
RAPGEF1-203ENST00000372195 RANGAP1P46060 587 aaPredicted RBP37.08■■■■□ 3.53
RAPGEF1-203ENST00000372195 ERICH6Q7L0X2 663 aa36.68■■■■□ 3.46
RAPGEF1-203ENST00000372195 CCER1Q8TC90 406 aaPredicted RBP36.62■■■■□ 3.45
RAPGEF1-203ENST00000372195 CENPBP07199 599 aaPredicted RBP36.53■■■■□ 3.44
RAPGEF1-203ENST00000372195 ATP1B4Q9UN42 357 aaPredicted RBP36.51■■■■□ 3.44
RAPGEF1-203ENST00000372195 YTHDC1Q96MU7 727 aaKnown RBP36.41■■■■□ 3.42
RAPGEF1-203ENST00000372195 TRIM41Q8WV44 630 aa36.4■■■■□ 3.42
RAPGEF1-203ENST00000372195 PPARGC1BQ86YN6 1023 aaKnown RBP36.26■■■■□ 3.39
RAPGEF1-203ENST00000372195 ZEB1P37275 1124 aaPredicted RBP36.24■■■■□ 3.39
RAPGEF1-203ENST00000372195 UBTFP17480 764 aaKnown RBP36.11■■■■□ 3.37
RAPGEF1-203ENST00000372195 NEFLP07196 543 aa35.8■■■■□ 3.32
RAPGEF1-203ENST00000372195 MYT1Q01538 1121 aa35.4■■■■□ 3.26
RAPGEF1-203ENST00000372195 ITGAEP38570 1179 aa35.4■■■■□ 3.26
RAPGEF1-203ENST00000372195 TRIM26Q12899 539 aaPredicted RBP35.37■■■■□ 3.25
RAPGEF1-203ENST00000372195 POLR3GLQ9BT43 218 aa35.29■■■■□ 3.24
RAPGEF1-203ENST00000372195 LOC105371045A0A1W2PR82 267 aa35.28■■■■□ 3.24
RAPGEF1-203ENST00000372195 HRCP23327 699 aa35.24■■■■□ 3.23
RAPGEF1-203ENST00000372195 CNGB1Q14028 1251 aaPredicted RBP35.24■■■■□ 3.23
RAPGEF1-203ENST00000372195 HNRNPUL2Q1KMD3 747 aaKnown RBP35.06■■■■□ 3.2
RAPGEF1-203ENST00000372195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.93■■■■□ 3.18
RAPGEF1-203ENST00000372195 MYT1LQ9UL68 1186 aa34.91■■■■□ 3.18
RAPGEF1-203ENST00000372195 DAXXQ9UER7 740 aaPredicted RBP34.87■■■■□ 3.17
RAPGEF1-203ENST00000372195 CHIC1Q5VXU3 224 aa34.72■■■■□ 3.15
RAPGEF1-203ENST00000372195 SLC4A1APQ9BWU0 796 aaKnown RBP34.48■■■■□ 3.11
RAPGEF1-203ENST00000372195 DIEXFQ68CQ4 756 aaKnown RBP34.47■■■■□ 3.11
RAPGEF1-203ENST00000372195 BCANQ96GW7 911 aa34.29■■■■□ 3.08
RAPGEF1-203ENST00000372195 FAM50AQ14320 339 aaKnown RBP34.24■■■■□ 3.07
RAPGEF1-203ENST00000372195 NEUROD1Q13562 356 aa34.19■■■■□ 3.06
RAPGEF1-203ENST00000372195 CLSPNQ9HAW4 1339 aa34.18■■■■□ 3.06
RAPGEF1-203ENST00000372195 ZNF316A6NFI3 1004 aaPredicted RBP34.16■■■■□ 3.06
RAPGEF1-203ENST00000372195 RTL5Q5HYW3 569 aaPredicted RBP34.14■■■■□ 3.06
RAPGEF1-203ENST00000372195 GTF3C3Q9Y5Q9 886 aa34.05■■■■□ 3.04
RAPGEF1-203ENST00000372195 TRIM52Q96A61 297 aa34.04■■■■□ 3.04
RAPGEF1-203ENST00000372195 ZNF326Q5BKZ1 582 aaKnown RBP33.85■■■■□ 3.01
RAPGEF1-203ENST00000372195 PABPN1Q86U42 306 aaKnown RBP eCLIP33.72■■■□□ 2.99
RAPGEF1-203ENST00000372195 BCL11AQ9H165 835 aa33.69■■■□□ 2.98
RAPGEF1-203ENST00000372195 ANP32CO43423 234 aa33.64■■■□□ 2.98
RAPGEF1-203ENST00000372195 CDK11AQ9UQ88 783 aaPredicted RBP33.55■■■□□ 2.96
RAPGEF1-203ENST00000372195 ARID3CA6NKF2 412 aa33.45■■■□□ 2.95
RAPGEF1-203ENST00000372195 P3H3Q8IVL6 736 aa33.38■■■□□ 2.93
RAPGEF1-203ENST00000372195 SLC24A1O60721 1099 aa33.35■■■□□ 2.93
RAPGEF1-203ENST00000372195 ABCC9O60706 1549 aa33.34■■■□□ 2.93
RAPGEF1-203ENST00000372195 FBLN2P98095 1184 aa33.33■■■□□ 2.93
RAPGEF1-203ENST00000372195 CANXP27824 592 aaKnown RBP33.3■■■□□ 2.92
RAPGEF1-203ENST00000372195 ACIN1Q9UKV3 1341 aaKnown RBP33.29■■■□□ 2.92
RAPGEF1-203ENST00000372195 NPM2Q86SE8 214 aaKnown RBP33.24■■■□□ 2.91
RAPGEF1-203ENST00000372195 ZBTB47Q9UFB7 747 aaPredicted RBP33.23■■■□□ 2.91
RAPGEF1-203ENST00000372195 ZNF777Q9ULD5 760 aaPredicted RBP33.03■■■□□ 2.88
RAPGEF1-203ENST00000372195 FKBP8Q14318 412 aa33■■■□□ 2.87
RAPGEF1-203ENST00000372195 ANP32AP39687 249 aaKnown RBP32.97■■■□□ 2.87
RAPGEF1-203ENST00000372195 EIF5BO60841 1220 aaKnown RBP32.85■■■□□ 2.85
RAPGEF1-203ENST00000372195 SALL2Q9Y467 1007 aaPredicted RBP32.82■■■□□ 2.85
RAPGEF1-203ENST00000372195 CSRNP3Q8WYN3 585 aa32.81■■■□□ 2.84
RAPGEF1-203ENST00000372195 NEFMP07197 916 aa32.78■■■□□ 2.84
RAPGEF1-203ENST00000372195 FAM9BQ8IZU0 186 aa32.77■■■□□ 2.84
RAPGEF1-203ENST00000372195 DDX10Q13206 875 aaKnown RBP32.75■■■□□ 2.83
RAPGEF1-203ENST00000372195 HNRNPUQ00839 825 aaKnown RBP eCLIP32.73■■■□□ 2.83
RAPGEF1-203ENST00000372195 NBR1Q14596 966 aa32.62■■■□□ 2.81
RAPGEF1-203ENST00000372195 CHGAP10645 457 aaKnown RBP32.59■■■□□ 2.81
RAPGEF1-203ENST00000372195 TONSLQ96HA7 1378 aa32.59■■■□□ 2.81
RAPGEF1-203ENST00000372195 PLPPR3Q6T4P5 718 aa32.58■■■□□ 2.81
RAPGEF1-203ENST00000372195 IRX6P78412 446 aaPredicted RBP32.53■■■□□ 2.8
RAPGEF1-203ENST00000372195 ARXQ96QS3 562 aa32.52■■■□□ 2.8
RAPGEF1-203ENST00000372195 CHIC2Q9UKJ5 165 aa32.51■■■□□ 2.79
RAPGEF1-203ENST00000372195 HSP90AA1P07900 732 aaKnown RBP32.5■■■□□ 2.79
RAPGEF1-203ENST00000372195 HIRIP3Q9BW71 556 aaPredicted RBP32.49■■■□□ 2.79
RAPGEF1-203ENST00000372195 SCAF1Q9H7N4 1312 aaKnown RBP32.45■■■□□ 2.79
RAPGEF1-203ENST00000372195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.36■■■□□ 2.772e-10■■■□□ 18.1
RAPGEF1-203ENST00000372195 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
RAPGEF1-203ENST00000372195 CCDC136Q96JN2 1154 aa32.33■■■□□ 2.77
RAPGEF1-203ENST00000372195 ANP32BQ92688 251 aaKnown RBP32.33■■■□□ 2.77
RAPGEF1-203ENST00000372195 MIER1Q8N108 512 aa32.33■■■□□ 2.77
RAPGEF1-203ENST00000372195 STAG3Q9UJ98 1225 aa32.31■■■□□ 2.76
RAPGEF1-203ENST00000372195 KDM2AQ9Y2K7 1162 aa32.3■■■□□ 2.76
RAPGEF1-203ENST00000372195 TMC1Q8TDI8 760 aa32.28■■■□□ 2.76
RAPGEF1-203ENST00000372195 UPF2Q9HAU5 1272 aaKnown RBP32.28■■■□□ 2.76
RAPGEF1-203ENST00000372195 SENP3Q9H4L4 574 aaPredicted RBP32.27■■■□□ 2.76
RAPGEF1-203ENST00000372195 SENP3-EIF4A1A0A087X0R7 540 aa32.25■■■□□ 2.75
RAPGEF1-203ENST00000372195 DCAF1Q9Y4B6 1507 aa32.23■■■□□ 2.75
RAPGEF1-203ENST00000372195 MRS2Q9HD23 443 aa32.19■■■□□ 2.74
RAPGEF1-203ENST00000372195 ESF1Q9H501 851 aaKnown RBP32.18■■■□□ 2.74
RAPGEF1-203ENST00000372195 WDR43Q15061 677 aaKnown RBP eCLIP32.11■■■□□ 2.73
RAPGEF1-203ENST00000372195 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.01■■■□□ 2.71
RAPGEF1-203ENST00000372195 PLEKHG5O94827 1062 aa31.97■■■□□ 2.71
RAPGEF1-203ENST00000372195 GLIPR1L2Q4G1C9 344 aa31.94■■■□□ 2.7
RAPGEF1-203ENST00000372195 RRP7BPQ9NSQ0 103 aa31.94■■■□□ 2.7
RAPGEF1-203ENST00000372195 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
RAPGEF1-203ENST00000372195 ZBTB7CA1YPR0 619 aa31.84■■■□□ 2.69
RAPGEF1-203ENST00000372195 MTUS2Q5JR59 1369 aa31.82■■■□□ 2.68
RAPGEF1-203ENST00000372195 NPM1P06748 294 aaKnown RBP eCLIP31.76■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms