Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 PGM3-207ENST00000507554 556 ntTSL 45.23□□□□□ -1.575e-7■■■■■ 52.9
U2AF2P26368 MVD-212ENST00000565842 285 ntTSL 326.74■■□□□ 1.873e-49■■■■■ 52.7
U2AF2P26368 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.733e-49■■■■■ 52.7
U2AF2P26368 MVD-204ENST00000562741 217 ntTSL 223.27■■□□□ 1.323e-49■■■■■ 52.7
U2AF2P26368 MVD-210ENST00000565610 507 ntTSL 322.08■■□□□ 1.133e-49■■■■■ 52.7
U2AF2P26368 MVD-208ENST00000563785 888 ntTSL 221.86■■□□□ 1.093e-49■■■■■ 52.7
U2AF2P26368 MVD-214ENST00000567064 758 ntTSL 321.13■□□□□ 0.973e-49■■■■■ 52.7
U2AF2P26368 MVD-216ENST00000568709 809 ntTSL 520.94■□□□□ 0.943e-49■■■■■ 52.7
U2AF2P26368 MVD-217ENST00000569177 870 ntTSL 519.28■□□□□ 0.683e-49■■■■■ 52.7
U2AF2P26368 MVD-206ENST00000563170 904 ntTSL 318.52■□□□□ 0.563e-49■■■■■ 52.7
U2AF2P26368 MVD-215ENST00000568133 853 ntTSL 318.51■□□□□ 0.553e-49■■■■■ 52.7
U2AF2P26368 MVD-207ENST00000563463 543 ntTSL 317.07■□□□□ 0.323e-49■■■■■ 52.7
U2AF2P26368 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.886e-10■■■■■ 52.6
U2AF2P26368 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.236e-10■■■■■ 52.6
U2AF2P26368 ID2-204ENST00000472142 474 ntTSL 22.89□□□□□ -1.955e-11■■■■■ 52.6
U2AF2P26368 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.718e-14■■■■■ 52.4
U2AF2P26368 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC10.02□□□□□ -0.818e-14■■■■■ 52.4
U2AF2P26368 FNIP2-203ENST00000504715 724 ntTSL 511.58□□□□□ -0.563e-7■■■■■ 52.3
U2AF2P26368 FNIP2-202ENST00000504704 3704 ntTSL 1 (best)8.06□□□□□ -1.123e-7■■■■■ 52.3
U2AF2P26368 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.066e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.08□□□□□ -0.166e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC13.38□□□□□ -0.276e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-231ENST00000557336 580 ntTSL 312.3□□□□□ -0.446e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.446e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-232ENST00000557442 1308 ntTSL 211.95□□□□□ -0.56e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC11.83□□□□□ -0.526e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-213ENST00000554891 644 ntTSL 511.78□□□□□ -0.526e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC11.64□□□□□ -0.556e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC11.45□□□□□ -0.586e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC11.27□□□□□ -0.616e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-218ENST00000555215 781 ntTSL 511.08□□□□□ -0.646e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-209ENST00000554383 1039 ntTSL 511.08□□□□□ -0.646e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC10.99□□□□□ -0.656e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC10.94□□□□□ -0.666e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-228ENST00000557033 760 ntTSL 310.87□□□□□ -0.676e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-224ENST00000556226 629 ntTSL 510.87□□□□□ -0.676e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-216ENST00000555137 789 ntTSL 310.52□□□□□ -0.736e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC10.39□□□□□ -0.756e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.826e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-207ENST00000553614 604 ntTSL 59.78□□□□□ -0.846e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-212ENST00000554539 748 ntTSL 59.36□□□□□ -0.916e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC8.5□□□□□ -1.056e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-215ENST00000555127 929 ntTSL 27.49□□□□□ -1.216e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-233ENST00000557768 599 ntTSL 35.77□□□□□ -1.496e-16■■■■■ 52.2
U2AF2P26368 RCOR1-204ENST00000560472 411 ntTSL 34.53□□□□□ -1.687e-35■■■■■ 52.2
U2AF2P26368 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.421e-13■■■■■ 51.6
U2AF2P26368 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51e-13■■■■■ 51.6
U2AF2P26368 CSPP1-202ENST00000519163 3982 ntTSL 23.42□□□□□ -1.861e-13■■■■■ 51.6
U2AF2P26368 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.923e-7■■■■■ 51.5
U2AF2P26368 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)18.26■□□□□ 0.513e-7■■■■■ 51.5
U2AF2P26368 PRSS53-202ENST00000486499 5489 ntTSL 216.79■□□□□ 0.283e-7■■■■■ 51.5
U2AF2P26368 PPARGC1A-207ENST00000508380 576 ntTSL 45.13□□□□□ -1.596e-11■■■■■ 51.2
U2AF2P26368 HGD-205ENST00000476082 462 ntTSL 55.79□□□□□ -1.483e-10■■■■■ 51
U2AF2P26368 PPWD1-206ENST00000508982 838 ntTSL 213.45□□□□□ -0.261e-22■■■■■ 51
U2AF2P26368 PPWD1-203ENST00000503435 592 ntTSL 410.01□□□□□ -0.811e-22■■■■■ 51
U2AF2P26368 LRPAP1-203ENST00000509198 1170 ntTSL 222.09■■□□□ 1.136e-11■■■■■ 50.8
U2AF2P26368 LRPAP1-201ENST00000296325 1078 ntTSL 1 (best)19.26■□□□□ 0.676e-11■■■■■ 50.8
U2AF2P26368 LRPAP1-204ENST00000515119 1167 ntTSL 216.81■□□□□ 0.286e-11■■■■■ 50.8
U2AF2P26368 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.156e-11■■■■■ 50.8
U2AF2P26368 SLC12A6-215ENST00000560023 550 ntTSL 48.42□□□□□ -1.066e-11■■■■■ 50.8
U2AF2P26368 ATP5C1-207ENST00000472202 782 ntTSL 24.4□□□□□ -1.716e-17■■■■■ 50.5
U2AF2P26368 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.02■□□□□ 0.472e-10■■■■■ 50.5
U2AF2P26368 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-10■■■■■ 50.5
U2AF2P26368 STRN-203ENST00000495595 1026 ntTSL 1 (best)3.11□□□□□ -1.912e-10■■■■■ 50.5
U2AF2P26368 USP36-205ENST00000586531 898 ntTSL 330.85■■■□□ 2.532e-47■■■■■ 50.4
U2AF2P26368 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.96■■□□□ 1.752e-47■■■■■ 50.4
U2AF2P26368 USP36-220ENST00000591942 564 ntTSL 524.32■■□□□ 1.482e-47■■■■■ 50.4
U2AF2P26368 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.115e-16■■■■■ 50.4
U2AF2P26368 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.64■■□□□ 1.052e-47■■■■■ 50.4
U2AF2P26368 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.355e-16■■■■■ 50.4
U2AF2P26368 USP36-210ENST00000588086 3187 ntAPPRIS ALT2 TSL 1 (best)16.92■□□□□ 0.35e-16■■■■■ 50.4
U2AF2P26368 USP36-214ENST00000589225 5885 ntTSL 1 (best)15.87■□□□□ 0.135e-16■■■■■ 50.4
U2AF2P26368 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.075e-16■■■■■ 50.4
U2AF2P26368 USP36-206ENST00000586896 696 ntTSL 515.41■□□□□ 0.062e-47■■■■■ 50.4
U2AF2P26368 SUMF2-206ENST00000413952 881 ntTSL 321.49■■□□□ 1.032e-13■■■■■ 50.4
U2AF2P26368 SUMF2-215ENST00000461912 529 ntTSL 412.05□□□□□ -0.482e-13■■■■■ 50.4
U2AF2P26368 FNIP2-206ENST00000512986 2173 ntTSL 1 (best)12.91□□□□□ -0.342e-7■■■■■ 50.3
U2AF2P26368 FNIP2-201ENST00000264433 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.422e-7■■■■■ 50.3
U2AF2P26368 ZEB1-220ENST00000560909 564 ntTSL 46.3□□□□□ -1.42e-9■■■■■ 49.8
U2AF2P26368 ITIH3-204ENST00000464804 543 ntTSL 418.72■□□□□ 0.597e-21■■■■■ 49.8
U2AF2P26368 SMC4-212ENST00000470240 724 ntTSL 39.18□□□□□ -0.943e-8■■■■■ 49.6
U2AF2P26368 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.092e-9■■■■■ 49.5
U2AF2P26368 COG7-205ENST00000567821 922 ntTSL 511.84□□□□□ -0.515e-11■■■■■ 49.5
U2AF2P26368 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.156e-11■■■■■ 49.5
U2AF2P26368 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.796e-11■■■■■ 49.5
U2AF2P26368 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.366e-11■■■■■ 49.5
U2AF2P26368 PDK1-209ENST00000466437 599 ntTSL 48.71□□□□□ -1.026e-11■■■■■ 49.5
U2AF2P26368 ARNT-206ENST00000497108 546 ntTSL 410.32□□□□□ -0.761e-9■■■■■ 49.5
U2AF2P26368 ARNT-209ENST00000505979 570 ntTSL 29.08□□□□□ -0.961e-9■■■■■ 49.5
U2AF2P26368 ARNT-207ENST00000504358 571 ntTSL 48.94□□□□□ -0.981e-9■■■■■ 49.5
U2AF2P26368 SMC4-219ENST00000487747 637 ntTSL 50.92□□□□□ -2.268e-7■■■■■ 49.4
U2AF2P26368 SMG7-205ENST00000440812 1190 ntTSL 523■■□□□ 1.277e-17■■■■■ 49.3
U2AF2P26368 SMG7-204ENST00000419169 2483 ntAPPRIS ALT2 TSL 220.36■□□□□ 0.857e-17■■■■■ 49.3
U2AF2P26368 SMG7-203ENST00000367538 328 ntTSL 220.22■□□□□ 0.837e-17■■■■■ 49.3
U2AF2P26368 SMG7-206ENST00000444547 580 ntTSL 419.37■□□□□ 0.697e-17■■■■■ 49.3
U2AF2P26368 SMG7-213ENST00000507691 760 ntTSL 518.66■□□□□ 0.587e-17■■■■■ 49.3
U2AF2P26368 SMG7-210ENST00000502375 566 ntTSL 517.09■□□□□ 0.337e-17■■■■■ 49.3
U2AF2P26368 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.037e-17■■■■■ 49.3
U2AF2P26368 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.267e-17■■■■■ 49.3
U2AF2P26368 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.477e-17■■■■■ 49.3
Retrieved 100 of 36,523 protein–RNA pairs in 117.9 ms