RNA–Protein interactions for RNA: ENST00000461912.1

SUMF2-215, Transcript of sulfatase modifying factor 2, humanhuman

TSL 4

Gene SUMF2, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF2-215ENST00000461912 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
SUMF2-215ENST00000461912 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
SUMF2-215ENST00000461912 ABCC9O60706 1549 aa21.42■■□□□ 1.02
SUMF2-215ENST00000461912 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
SUMF2-215ENST00000461912 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
SUMF2-215ENST00000461912 RB1CC1Q8TDY2 1594 aa20.44■□□□□ 0.86
SUMF2-215ENST00000461912 NACADO15069 1562 aa20.35■□□□□ 0.85
SUMF2-215ENST00000461912 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
SUMF2-215ENST00000461912 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
SUMF2-215ENST00000461912 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
SUMF2-215ENST00000461912 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
SUMF2-215ENST00000461912 UNC13AQ9UPW8 1703 aa19.97■□□□□ 0.79
SUMF2-215ENST00000461912 DNAJC5BQ9UF47 199 aa19.9■□□□□ 0.78
SUMF2-215ENST00000461912 BICRAQ9NZM4 1560 aa19.84■□□□□ 0.77
SUMF2-215ENST00000461912 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
SUMF2-215ENST00000461912 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
SUMF2-215ENST00000461912 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
SUMF2-215ENST00000461912 EIF4G1Q04637 1599 aaKnown RBP19.34■□□□□ 0.69
SUMF2-215ENST00000461912 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
SUMF2-215ENST00000461912 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
SUMF2-215ENST00000461912 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
SUMF2-215ENST00000461912 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
SUMF2-215ENST00000461912 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
SUMF2-215ENST00000461912 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
SUMF2-215ENST00000461912 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
SUMF2-215ENST00000461912 MROH2BQ7Z745 1585 aa18.69■□□□□ 0.58
SUMF2-215ENST00000461912 HMGXB3Q12766 1538 aa18.66■□□□□ 0.58
SUMF2-215ENST00000461912 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
SUMF2-215ENST00000461912 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
SUMF2-215ENST00000461912 WIZO95785 1651 aa18.47■□□□□ 0.55
SUMF2-215ENST00000461912 NESP48681 1621 aa18.47■□□□□ 0.55
SUMF2-215ENST00000461912 ERCC6Q03468 1493 aa18.46■□□□□ 0.55
SUMF2-215ENST00000461912 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
SUMF2-215ENST00000461912 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
SUMF2-215ENST00000461912 LAMC3Q9Y6N6 1575 aa18.32■□□□□ 0.52
SUMF2-215ENST00000461912 CUX2O14529 1486 aa18.29■□□□□ 0.52
SUMF2-215ENST00000461912 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
SUMF2-215ENST00000461912 PDS5BQ9NTI5 1447 aa18.24■□□□□ 0.51
SUMF2-215ENST00000461912 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
SUMF2-215ENST00000461912 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
SUMF2-215ENST00000461912 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
SUMF2-215ENST00000461912 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
SUMF2-215ENST00000461912 CFTRP13569 1480 aa18.1■□□□□ 0.49
SUMF2-215ENST00000461912 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
SUMF2-215ENST00000461912 FANCD2Q9BXW9 1451 aa18.06■□□□□ 0.48
SUMF2-215ENST00000461912 MRC2Q9UBG0 1479 aa18.06■□□□□ 0.48
SUMF2-215ENST00000461912 DNAJC5Q9H3Z4 198 aa18.05■□□□□ 0.48
SUMF2-215ENST00000461912 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
SUMF2-215ENST00000461912 WDR62O43379 1518 aa17.98■□□□□ 0.47
SUMF2-215ENST00000461912 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.45
SUMF2-215ENST00000461912 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
SUMF2-215ENST00000461912 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
SUMF2-215ENST00000461912 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
SUMF2-215ENST00000461912 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
SUMF2-215ENST00000461912 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
SUMF2-215ENST00000461912 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
SUMF2-215ENST00000461912 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
SUMF2-215ENST00000461912 POLA1P09884 1462 aaPredicted RBP17.58■□□□□ 0.41
SUMF2-215ENST00000461912 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
SUMF2-215ENST00000461912 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
SUMF2-215ENST00000461912 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.41e-13■■■■■ 64.3
SUMF2-215ENST00000461912 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
SUMF2-215ENST00000461912 CUX1P39880 1505 aa17.53■□□□□ 0.4
SUMF2-215ENST00000461912 SOGA1O94964 1423 aa17.53■□□□□ 0.4
SUMF2-215ENST00000461912 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.39
SUMF2-215ENST00000461912 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
SUMF2-215ENST00000461912 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
SUMF2-215ENST00000461912 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
SUMF2-215ENST00000461912 FBLN2P98095 1184 aa17.42■□□□□ 0.38
SUMF2-215ENST00000461912 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
SUMF2-215ENST00000461912 CHD1O14646 1710 aa17.35■□□□□ 0.37
SUMF2-215ENST00000461912 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
SUMF2-215ENST00000461912 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
SUMF2-215ENST00000461912 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
SUMF2-215ENST00000461912 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
SUMF2-215ENST00000461912 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
SUMF2-215ENST00000461912 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
SUMF2-215ENST00000461912 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
SUMF2-215ENST00000461912 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
SUMF2-215ENST00000461912 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
SUMF2-215ENST00000461912 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
SUMF2-215ENST00000461912 RIMBP3CA6NJZ7 1639 aa17.27■□□□□ 0.36
SUMF2-215ENST00000461912 RIMBP3BA6NNM3 1639 aa17.27■□□□□ 0.36
SUMF2-215ENST00000461912 RIMBP3Q9UFD9 1639 aa17.27■□□□□ 0.36
SUMF2-215ENST00000461912 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
SUMF2-215ENST00000461912 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
SUMF2-215ENST00000461912 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
SUMF2-215ENST00000461912 SYNJ2O15056 1496 aa17.23■□□□□ 0.35
SUMF2-215ENST00000461912 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
SUMF2-215ENST00000461912 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
SUMF2-215ENST00000461912 ARAP1Q96P48 1450 aa17.1■□□□□ 0.33
SUMF2-215ENST00000461912 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
SUMF2-215ENST00000461912 FHAD1B1AJZ9 1412 aa17.09■□□□□ 0.33
SUMF2-215ENST00000461912 GRIN2AQ12879 1464 aa17.09■□□□□ 0.33
SUMF2-215ENST00000461912 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
SUMF2-215ENST00000461912 FOXD1Q16676 465 aa17.04■□□□□ 0.32
SUMF2-215ENST00000461912 CEP170Q5SW79 1584 aa17.02■□□□□ 0.32
SUMF2-215ENST00000461912 NUP160Q12769 1436 aa17.02■□□□□ 0.31
SUMF2-215ENST00000461912 EEA1Q15075 1411 aa17■□□□□ 0.31
SUMF2-215ENST00000461912 KIF27Q86VH2 1401 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms